Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 67,142 (bp)   Positions: 120
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
ACI/EurMcwi (MCW) 
.0
.0
.0
.002
.002
.0
.0
.972
.933
.006
.0
.545
.997
.013
.0
.008
.001
.079
.589
.001
.0
.884
.003
.001
.0
--
--
--
--
--
--
.001
.266
.051
.068
.012
.016
.001
.057
.001
.039
.001
.001
.002
.028
.001
.0
.002
--
--
--
--
--
.0
.014
.03
.001
.001
.312
.17
.001
.017
.353
.76
--
--
--
--
--
--
--
--
--
.002
.002
.01
.323
.046
.0
.0
.089
.026
.0
.009
.0
.0
.0
.048
.005
--
.001
.008
--
--
--
--
--
--
--
--
--
--
--
--
--
.046
.016
.016
.661
.024
.012
.0
.157
.001
.207
.001
.005
.0
.0
.991
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ift57
Ift57
Ift57
Ift57
Ift57
Ift57
Ift57
Ift57
Ift57
Ift57
Ift57
Ift57
T
C
T
G
G
C
T
G
T
C
A
G
T
G
A
T
A
T
A
C
G
A
G
C
A
C
C
C
A
A
A
T
G
T
A
C
A
C
A
A
A
G
G
G
A
C
G
C
C
A
C
C
C
T
T
T
G
G
G
T
C
T
A
C
C
A
G
C
T
C
C
G
C
C
A
G
C
A
C
G
T
C
T
C
G
T
C
T
G
G
T
G
A
G
C
A
G
C
A
G
C
G
A
T
A
A
A
C
A
G
C
A
A
T
C
C
G
T
T
T
  53,665,210
  53,666,583
  53,666,827
  53,666,998
  53,667,392
  53,667,484
  53,667,658
  53,667,785
  53,667,876
  53,668,196
  53,668,440
  53,668,795
  53,668,803
  53,669,680
  53,671,689
  53,672,117
  53,672,261
  53,672,549
  53,672,626
  53,672,757
  53,672,835
  53,673,802
  53,674,655
  53,674,729
  53,674,964
  53,680,859
  53,680,874
  53,680,878
  53,680,881
  53,680,903
  53,680,906
  53,681,140
  53,682,910
  53,686,594
  53,687,330
  53,690,155
  53,691,160
  53,698,413
  53,698,528
  53,698,618
  53,698,660
  53,698,952
  53,700,822
  53,702,814
  53,704,215
  53,705,026
  53,705,461
  53,706,359
  53,707,031
  53,707,092
  53,714,291
  53,714,428
  53,714,771
  53,717,189
  53,717,551
  53,723,282
  53,723,388
  53,723,444
  53,723,481
  53,723,643
  53,723,768
  53,723,811
  53,723,858
  53,724,003
  53,724,017
  53,724,018
  53,724,060
  53,724,069
  53,724,088
  53,724,163
  53,724,172
  53,724,179
  53,724,206
  53,724,221
  53,724,222
  53,724,231
  53,724,341
  53,724,438
  53,724,453
  53,724,525
  53,724,547
  53,724,815
  53,725,082
  53,725,116
  53,725,167
  53,725,168
  53,725,250
  53,725,392
  53,725,442
  53,725,612
  53,725,729
  53,725,760
  53,725,876
  53,725,936
  53,726,087
  53,726,202
  53,726,228
  53,726,278
  53,726,364
  53,726,501
  53,726,584
  53,726,599
  53,726,608
  53,726,681
  53,726,731
  53,726,919
  53,727,078
  53,727,252
  53,727,511
  53,727,579
  53,728,112
  53,728,377
  53,728,613
  53,728,809
  53,728,898
  53,729,413
  53,729,523
  53,729,729
  53,730,154
  53,731,550
C
T
C
A
A
T
C
A
G
T
T
A
C
A
C
C
C
C
G
T
A
G
A
T
C
C/A
C/A
C/T
A/C
A/C
A/T
A
A
C
G
T
G
A
G
G
G
A
A
C
G
T
A
T
C/T
A/G
C/T
C/A
C/G
A
C
C
A
T
A
A
A
A
C
A
T
G
C
A
C
A
T
A
T
T
G
A
T
G
T
A
C
T
C
A
A
C
A
C
T
A
C
T
T
G/T
T
T
A
T
G
A
T
A
G
A
G
G
T
T
T
T
T
T
T
C
T
A
C
C
A
A