Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 39,317 (bp)   Positions: 106
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SBN/Ygl (MCW) 
.001
.001
.004
.003
.0
.022
.0
.001
.0
.509
.002
.099
.037
.005
.0
.019
.0
.073
.0
.0
.921
.003
.002
.055
.003
.009
.007
.001
.007
.005
.001
.012
.998
.001
.0
.486
.023
.002
.005
.019
.197
.087
.0
.889
.0
.004
.001
.019
.001
--
--
--
.028
.006
.0
.0
.998
.0
.022
.135
.012
.506
.001
.0
.043
.026
.003
--
.0
.008
.015
--
.008
.003
.002
.004
.0
.001
.006
.001
.046
.002
.003
.017
.004
.005
--
--
--
--
--
--
--
.006
.004
.004
.0
.228
.007
.0
.002
.009
.012
.002
.0
.041
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Hps5
Hps5
Hps5
Hps5
Hps5
Hps5
Hps5
Hps5
Hps5
Hps5
Hps5
G
G
G
A
G
G
A
A
C
A
T
G
T
A
T
T
A
A
G
T
G
T
C
C
G
C
C
C
C
A
A
A
T
T
G
G
A
T
G
C
A
C
A
C
T
C
G
G
G
T
C
C
C
G
G
C
T
A
G
G
G
G
T
C
C
G
T
T
T
T
A
A
G
C
G
T
C
A
G
A
C
C
A
T
T
T
C
T
A
T
G
C
T
C
A
G
G
C
C
C
C
C
G
A
T
G
  102,810,421
  102,810,425
  102,810,444
  102,810,452
  102,811,317
  102,811,578
  102,811,662
  102,812,386
  102,812,544
  102,813,707
  102,813,748
  102,813,927
  102,813,980
  102,815,789
  102,816,564
  102,816,611
  102,816,818
  102,817,862
  102,818,029
  102,818,615
  102,819,004
  102,819,382
  102,819,689
  102,819,728
  102,821,460
  102,822,017
  102,822,394
  102,822,641
  102,823,025
  102,823,223
  102,823,247
  102,823,322
  102,823,525
  102,823,683
  102,823,804
  102,824,002
  102,824,293
  102,824,896
  102,824,963
  102,825,036
  102,825,585
  102,826,468
  102,826,640
  102,827,632
  102,827,956
  102,828,103
  102,828,143
  102,828,163
  102,828,239
  102,828,622
  102,828,643
  102,828,665
  102,829,174
  102,829,200
  102,829,850
  102,829,856
  102,830,045
  102,830,216
  102,830,291
  102,830,350
  102,830,701
  102,831,058
  102,831,265
  102,831,371
  102,831,608
  102,831,936
  102,831,950
  102,833,268
  102,833,509
  102,833,635
  102,833,748
  102,834,228
  102,834,414
  102,834,681
  102,834,713
  102,834,875
  102,835,512
  102,835,519
  102,835,896
  102,836,216
  102,836,624
  102,837,432
  102,837,640
  102,837,858
  102,837,869
  102,837,995
  102,838,106
  102,838,368
  102,838,478
  102,838,635
  102,838,640
  102,838,646
  102,838,650
  102,838,674
  102,838,676
  102,838,681
  102,838,758
  102,838,809
  102,839,547
  102,839,806
  102,840,144
  102,840,295
  102,840,615
  102,844,114
  102,844,671
  102,844,790
A
G/A
G/A
G
A
A
T
G
T
G
C
A
C
T
C
C
G
C
A
A
A
C
T
T
A
T
T
T
G
G
G
G
C
C
A
A
G
C
A
T
A/G
T
G
T
C
T
A
A
A
C
G
T
T
A
A
T
C
C
A
A
C
A
C
T
T
C
C
C
C
C
G
G
A
G
G/A
G
T
G
A
T
T
T
T
C
A
C
T
G
G
T/C
G/C
C/T
T/C
C/T
A/G
G/C
A
G
T
A
G
T
T
G
C
A