Variant Visualizer (Variants)

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Sequence Annotation

Assembly Rnor_6.0

Conservation

Genes ( + )

Genes ( - )

Rnor 6.0

BXH3/CubMcwi (2020)

.997	.959	.001	.053	.006	.012	.0	.004	.0	.001	.835	.001	.0	.001	--	.021	.081	.293	.13	.001	.009	.043	.174	.064	.02	.49	.495	.01	.024	.006	.749	.024	.086	.065	.002	.0	.013	.008	.001	.0	.0	.0	.001	.001	.007	.008	1.0	.0	.0	.0	.0	.001	.001	.081	.978	.0	.001	.881	.79	.143	1.0	1.0	.997	.996	1.0	1.0	1.0	1.0	.973	.999	.998	.813	.729	.004	.001	.001	.023	.025	.0	.001	.0	.001	.016	.015	.026	.001	.0	.0	.0	.0	.03	.027	.065	.023	.008	.001	.037	.01	.002	.026	.008	.262	.009	.042	.001	.003	.069	.0	.0	.011	.002	.014	.055	.007	.019	.013	.085	.045	.108	.016	.001	.015	.004	.001	.017	.003	.0	.003	.05	.035	.011	.255	.0	.055	.0	.0	.002	.029	.006	.0	.0	.0	.0	.0	.002	.001	.0	.004	.059	.019	.168	.011	.002	.003	.029	.0	.015	.025	.203	.257	.021	.028	.002	.002	.015	.0	.002	.001	.0	.001	.052	.009	.011	.005	.015	.021	.092	.056	.085	.06	.114	.256	.203	.19	.018	.005	.003	.012	.003	.002	.003	.014	.054	.063	.134	.176	.169	.159	.124	.081	.086	.589	.557	--	--	--	--	--	--	--	--	--	.001	.0	.004	.0	.0	.0	.001	.048	.196	.222	.002	.001	.0	.0	.0	.002	.0	.004	.001	.015	.001	.02	.017	.003	.001	.004	.002	.055	.001	.001	.01	.001	.21	.002	.018	.003	.006	.0	.015	.009	.036	.016	.001	.027	.005	.032	.033	.051	.058	.002	.006	.993	.001	.001	.0	.002	.001	--	.049	.079	.0	.001	.003	.003	.624	.001	.059	.002	.029	.0	.018	.0	.0	.001	.001	.006	.42	.106	.122	.0	.001	.001	.003	.001	.042	.007	.0	.009	.0	.006	.007	.0	.005	.28	.0	.002	.009	.033	.024	.074	.003	.002	.008	.001	.002	.001	.059	.12	.026	.01	.0	.049	.016	.046	.029	.035	.314	.188	.079	.052	.004	.0	.0	.004	.203	.001	.009	.001	.0	.127	.001	.001	.002	.336	.0	.0	.046	.0	.0	.0	.994
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1										Hivep1
G	T	C	C	C	A	A	C	A	T	C	T	T	T	T	A	-	-	T	A	C	G	G	A	A	A	16	T	G	7	T	C	-	5	T	G	6	T	T	T	A	T	T	T	T	T	C	C	A	A	C	C	C	T	T	A	A	C	T	A	C	A	3	G	C	C	A	A	G	G	A	G	G	-	A	C	T	A	A	G	A	C	G	A	T	C	C	G	A	G	A	G	T	T	G	A	G	C	C	G	G	T	T	G	G	3	A	T	A	T	C	8	12	T	T	T	A	T	G	T	A	A	C	G	A	A	C	T	T	T	G	C	G	G	G	A	4	A	T	C	T	T	T	T	A	C	G	T	A	G	G	-	T	T	G	G	T	G	G	T	6	G	C	G	G	G	C	A	G	G	C	-	A	C	-	-	A	G	-	A	C	A	-	3	C	A	A	-	-	G	C	-	-	G	-	C	C	G	-	T	T	T	C	C	-	G	G	-	-	-	A	C	T	C	T	-	-	G	G	T	-	-	C	C	T	T	T	6	-	-	A	G	T	A	A	A	-	-	-	-	G	T	-	A	A	A	T	C	-	G	A	-	T	G	A	-	C	T	T	T	T	T	G	C	T	T	C	C	-	-	13	T	-	T	-	A	T	T	C	A	C	C	G	C	-	C	7	T	T	C	-	2	C	C	A	-	A	G	C	2	C	-	2	G	-	T	A	A	-	T	-	-	C	A	C	T	C	G	-	4	C	G	C	C	A	T	G	C	-	C	A	A	4	C	8	C	T	C	T	C	-	G	A	G	A	T	A	T	G	-	A	A	G
22,278,573	22,279,275	22,281,200	22,282,607	22,282,770	22,285,838	22,287,861	22,288,197	22,288,313	22,288,743	22,289,582	22,289,858	22,290,306	22,291,738	22,292,012	22,292,088	22,292,373	22,292,752	22,292,941	22,292,967	22,293,550	22,293,858	22,294,470	22,294,576	22,294,605	22,294,973	22,294,993	22,295,306	22,295,472	22,295,973	22,296,443	22,296,546	22,297,152	22,297,238	22,297,946	22,298,175	22,298,178	22,298,218	22,298,554	22,298,588	22,299,729	22,300,560	22,300,564	22,301,404	22,302,595	22,302,732	22,303,964	22,304,455	22,305,066	22,305,564	22,306,678	22,306,725	22,307,518	22,307,670	22,307,844	22,308,360	22,308,513	22,309,075	22,309,236	22,309,523	22,310,195	22,310,200	22,310,202	22,310,207	22,310,209	22,310,215	22,310,222	22,310,224	22,310,259	22,310,274	22,310,275	22,310,281	22,310,283	22,310,286	22,310,287	22,310,294	22,311,855	22,312,425	22,312,462	22,313,330	22,313,474	22,313,697	22,314,030	22,314,168	22,314,223	22,315,281	22,315,347	22,315,680	22,316,560	22,316,569	22,316,812	22,317,128	22,317,239	22,317,394	22,317,836	22,317,844	22,318,035	22,318,047	22,320,819	22,321,497	22,322,002	22,322,474	22,322,870	22,323,362	22,323,433	22,323,509	22,323,601	22,323,661	22,323,664	22,323,694	22,323,716	22,324,150	22,325,677	22,325,866	22,326,893	22,326,975	22,327,925	22,328,321	22,328,571	22,328,738	22,328,750	22,329,207	22,329,645	22,329,705	22,329,730	22,329,761	22,329,920	22,330,174	22,330,250	22,330,808	22,330,853	22,331,006	22,331,686	22,331,718	22,332,051	22,332,065	22,332,107	22,332,312	22,332,340	22,332,598	22,332,780	22,333,018	22,333,019	22,333,299	22,335,042	22,335,637	22,335,701	22,336,334	22,336,385	22,336,613	22,337,141	22,337,571	22,337,958	22,338,421	22,340,287	22,340,589	22,340,708	22,341,554	22,342,163	22,342,234	22,342,920	22,343,163	22,344,783	22,344,939	22,345,645	22,348,588	22,348,668	22,348,947	22,350,754	22,350,872	22,351,829	22,351,880	22,351,922	22,351,928	22,351,947	22,351,954	22,352,025	22,352,034	22,352,047	22,352,058	22,352,065	22,352,075	22,352,084	22,352,085	22,352,094	22,352,098	22,352,114	22,352,123	22,352,150	22,352,152	22,352,157	22,352,160	22,352,166	22,352,167	22,352,176	22,352,189	22,352,194	22,352,196	22,352,213	22,352,244	22,352,264	22,352,324	22,352,334	22,352,534	22,352,574	22,352,601	22,352,617	22,352,636	22,352,682	22,352,749	22,352,791	22,352,803	22,356,389	22,357,389	22,357,426	22,357,470	22,357,471	22,357,491	22,357,602	22,359,120	22,359,456	22,359,457	22,360,771	22,360,773	22,364,188	22,364,312	22,365,280	22,365,575	22,365,621	22,366,616	22,366,750	22,366,825	22,367,101	22,368,244	22,368,246	22,368,317	22,368,329	22,368,432	22,368,443	22,368,455	22,368,471	22,368,490	22,368,515	22,370,252	22,370,915	22,371,057	22,371,294	22,371,846	22,372,485	22,372,662	22,374,053	22,374,197	22,374,690	22,374,805	22,374,821	22,375,118	22,375,183	22,375,513	22,375,515	22,375,519	22,375,521	22,375,751	22,375,929	22,376,296	22,376,424	22,377,456	22,377,508	22,378,257	22,379,693	22,379,749	22,379,992	22,380,591	22,380,799	22,380,944	22,383,383	22,383,384	22,383,817	22,384,319	22,385,362	22,385,448	22,385,953	22,386,478	22,387,611	22,387,696	22,388,454	22,389,032	22,389,770	22,390,017	22,390,269	22,392,152	22,392,406	22,393,490	22,393,697	22,394,151	22,394,459	22,394,828	22,395,447	22,396,264	22,396,415	22,396,432	22,396,442	22,396,446	22,396,458	22,396,477	22,396,487	22,396,508	22,396,520	22,396,521	22,396,528	22,396,569	22,396,587	22,396,600	22,396,628	22,396,635	22,396,643	22,396,648	22,396,662	22,396,686	22,396,700	22,396,715	22,396,732	22,396,741	22,396,753	22,396,768	22,396,793	22,396,800	22,396,809	22,396,810	22,396,820	22,396,835	22,396,840	22,396,848	22,396,866	22,396,912	22,396,931	22,396,950	22,396,984	22,397,008	22,397,019	22,397,045	22,397,048	22,397,651	22,397,836	22,397,900	22,398,178	22,398,614	22,399,905	22,400,337	22,401,511	22,401,722	22,402,184	22,402,441	22,402,922
-	C	T	A	T	G	T	T	G	C	G	C	C	A	G	G	64	19	C	G	T	C	A	G	G	G	-	C	A	-	-	T	6	-	A	-	-	C	C	C	G	A	C	C	G	-	T	-	T	G	T	G	T	C	C	G	G	G	C	G	-	-	-	T	T	-	-	-	-	-	C	C	C	G	T	T	C	C	C	A	G	T	C	G	C	T	T	A	G	A	G	T	C	C	A	G	A	A	T	A	A	C	C	T	C	-	G	C	T	C	T	-	-	C	C	-	T	A	A	C	G	T	T	T	G	G	T	C	C	A	C	A	A	A	A	C	-	G	C	A	C	C	C	C	G	A	A	G	G	T	A	A	C	C	T	A	A	A	A	C	-	A	T	T	A	A	T	G	A	-	-	G	-	G	A	G	C	-	2	-	-	-	G	-	-	G	T	T	T	-	-	T	G	A	T	-	-	-	T	G	-	-	-	-	G	-	A	6	C	G	-	G	C	T	C	C	3	A	C	A	C	2	T	T	C	G	C	-	A	13	G	A	C	C	C	-	A	C	A	C	-	A	T	T	G	G	C	T	2	A	T	2	C	A	G	13	T	T/C	T/C	T/C	T/C	G	A	T	C	C	T	T	14	2	-	-	C	A	A	G	C	-	T	G	T	T	A	T	3	A	-	C	C	T	15	-	A	G	G	-/4	G	A	-	-	-	2	-	-	G	-	-	G	G	-	A	G	-	-	-	-	-	-	C	-	-	-	-	-	-	-	T	G	A	-	-	-	-	C/-	8/-	-	-	A	-	-	C	A	G	A	-	C	G	C	A	G	G	G	A