Home
Edit Strains
Edit Gene List
Sequence Annotation
Display an overview plot of the entire region. Useful if the region is too large to view on one screen
Variant Overview Plot
The variant distribution feature will display total counts for all genes and intergenic regions.
Variant Distribution Graph
GA Tool: All genes in the current region will be annotated by the Gene Annotater (GA Tool).
Annotate This Region
Download this graph to Excel or a text file
Download Data
Variant Visualizer Help Documentation
Help Docs
Chromosome
Start Position
Stop Position
Region Size:
21,552 (bp)
Positions:
28
Conservation
Genes
( + )
Genes
( - )
Rnor 6.0
WKY/NHsd (RGD)
.004
.005
.014
0
0
0
.138
.995
.003
.614
--
.656
0
.044
.87
0
.005
.072
.012
.015
.001
.126
.083
.066
.607
0
.002
.005
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Hif3a
Hif3a
Hif3a
T
T
C
C
C
C
C
G
A
T
T
G
T
A
A
T
G
T
T
C
A
T
C
C
A
C
A
C
78,977,626
78,978,195
78,978,708
78,979,273
78,979,389
78,980,050
78,980,545
78,980,976
78,983,309
78,983,810
78,984,297
78,985,320
78,985,355
78,985,754
78,987,049
78,987,713
78,988,521
78,989,041
78,989,182
78,990,148
78,992,587
78,993,008
78,993,048
78,994,115
78,994,793
78,995,601
78,995,670
78,995,899
C
C
T
T
T
G
T
A
T
C
G
A
C
C
G
C
A
G
C
T
G
C
T
T
G
T
T
T