Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 52,817 (bp)   Positions: 166
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
HXB10/IpcvMcwi (2019) 
.0
.001
.001
.027
.079
.0
.001
.0
.383
.025
.0
.005
.001
.006
.02
.072
.003
.0
.002
.0
.0
.0
.0
.0
.002
.095
.038
.0
.0
.002
.0
.0
.001
.055
.043
.047
.001
.0
.002
.002
.001
.197
.012
.022
.002
.0
.003
.0
.0
.0
.005
.203
.033
.001
.004
.0
.004
.071
.008
.336
.003
.156
.001
.0
.0
.001
.0
.892
.0
.0
.001
.001
.001
.003
.0
.0
.0
.001
.799
.799
--
--
--
--
.0
.001
.005
.0
.015
--
.023
.002
.0
.07
.003
.011
.017
.0
.001
.0
.0
.0
.008
.0
.0
.0
.747
.001
.007
.0
.003
.0
.0
.008
.98
.001
.0
.454
.014
.039
.0
.006
.001
.002
.062
.011
.001
.0
.002
.0
.018
.0
.001
.02
.984
.001
.0
.001
.0
.0
.0
.001
.015
.003
.0
.0
.011
.001
.012
.019
.096
.949
.001
.002
.003
.019
.006
.0
.0
.0
.0
1.0
.001
.499
.476
.941
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
Gsn
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
G
G
A
C
T
C
C
-
-
A
T
G
A
A
-
C
-
T
A
C
A
5
G
C
T
G
A
C
C
G
T
T
C
C
C
G
G
C
C
T
C
2
C
C
C
G
G
T
T
T
C
C
-
G
A
A
G
G
A
A
G
C
A
G
C
G
-
-
C
A
T
-
A
A
C
G
G
T
C
-
6
T
18
A
A
A
C
T
8
A
A
G
C
A
A
G
G
A
A
3
T
G
G
3
A
T
C
G
T
C
C
A
T
T
T
C
2
C
T
G
G
C
A
C
T
T
T
2
T
T
T
C
8
C
T
C
C
T
G
-
T
G
T
A
G
G
G
T
T
C
C
A
C
T
G
G
T
-
C
C
G
A
C
A
A
  14,456,399
  14,456,589
  14,459,327
  14,459,575
  14,459,868
  14,460,185
  14,460,540
  14,460,692
  14,461,739
  14,461,745
  14,461,762
  14,462,303
  14,462,820
  14,462,965
  14,463,222
  14,463,601
  14,464,236
  14,465,096
  14,465,923
  14,465,985
  14,466,028
  14,466,137
  14,466,272
  14,466,675
  14,466,689
  14,467,446
  14,467,782
  14,468,812
  14,468,852
  14,469,005
  14,469,105
  14,469,222
  14,469,536
  14,470,057
  14,470,103
  14,470,107
  14,470,413
  14,470,861
  14,472,204
  14,472,206
  14,472,635
  14,472,797
  14,472,977
  14,473,216
  14,473,312
  14,473,324
  14,473,336
  14,473,348
  14,473,356
  14,473,549
  14,474,245
  14,474,462
  14,474,803
  14,475,115
  14,475,228
  14,475,438
  14,475,853
  14,476,163
  14,476,208
  14,476,506
  14,476,790
  14,477,620
  14,478,622
  14,479,576
  14,479,885
  14,480,552
  14,481,431
  14,482,297
  14,482,316
  14,483,104
  14,483,116
  14,483,657
  14,484,169
  14,484,173
  14,484,177
  14,484,913
  14,486,005
  14,486,758
  14,487,613
  14,487,792
  14,488,493
  14,488,761
  14,488,783
  14,488,854
  14,489,934
  14,490,179
  14,490,670
  14,490,780
  14,492,502
  14,492,986
  14,493,105
  14,493,836
  14,493,843
  14,494,181
  14,494,958
  14,495,153
  14,495,166
  14,495,288
  14,496,120
  14,496,560
  14,496,819
  14,496,851
  14,496,863
  14,497,012
  14,497,038
  14,497,415
  14,497,956
  14,498,292
  14,498,322
  14,498,882
  14,498,977
  14,499,235
  14,499,609
  14,499,773
  14,500,276
  14,500,503
  14,500,687
  14,500,723
  14,501,128
  14,501,435
  14,501,487
  14,501,559
  14,502,071
  14,502,104
  14,502,671
  14,502,933
  14,502,945
  14,502,947
  14,502,950
  14,502,957
  14,502,961
  14,502,973
  14,502,974
  14,503,188
  14,503,977
  14,504,238
  14,504,468
  14,504,645
  14,504,811
  14,504,817
  14,504,965
  14,505,019
  14,505,121
  14,505,329
  14,505,480
  14,505,485
  14,505,491
  14,505,501
  14,505,517
  14,505,539
  14,505,569
  14,505,800
  14,506,532
  14,506,545
  14,506,546
  14,506,574
  14,506,598
  14,507,184
  14,507,918
  14,508,133
  14,508,426
  14,508,640
  14,508,755
  14,508,782
  14,508,783
  14,508,825
G
T
T
T
T
C
T
A
2
C/A
G
C
A
G
G
4
A
4
A
G
A
G
-
A
T
C
A
G
G
T
A
C
C
T
C/T
C/T
T
A
-
-
C
T
-
G
G
A
C
C
C
C
G
T
T
G
A
G
G
A
A
G
C
C
T
C
C
-
A
C
C
A
G
C
-/C
A/C
A/C
T
A
A
C
T
4
-
C
-
G
T
G
T
A
-
G
G
A
T
G
C
-
A
G
T
-
-
A
A
-
G
C
T
T
C
T
T
T
G
C
C
A
-
T
C
A
A
T
G
T
T/C
-
-
-
C
C
C
A
-
T
C
T
T
A
C
4
C
A
C
G
A
T
A
C
C
T
T
T
T
C
A
A
C
2
T
T
A
G
T
G
C