Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 238,477 (bp)   Positions: 374
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
MR/N (MCW) 
.034
.0
.002
.0
.001
.0
.008
.006
.0
.0
.006
.0
.001
.0
.012
.004
.046
.0
.238
.04
.003
.002
.003
.957
.0
.0
.002
.0
.0
.072
.009
.001
.0
.008
.0
.003
.002
.0
.0
.002
.0
.133
.0
.021
.0
.03
.021
.0
.013
.002
.008
.0
.0
.0
.0
.0
.005
.0
.002
.76
.617
.001
.006
.016
.0
.014
.001
.0
.025
.295
.001
.033
.0
.806
.076
.084
.0
.001
.0
.005
.0
.0
.001
.008
.002
.0
--
--
.042
.007
.002
.234
.0
.001
.002
.002
.0
.001
.002
.0
.014
.007
.005
.005
.064
.0
.006
.007
.0
.001
.001
.0
.003
.034
.228
.004
.002
.001
.0
.0
.0
.058
.001
.006
.0
.028
.001
.042
.072
.001
.043
.87
.994
.015
.042
.499
.008
.01
.001
.158
.161
.001
.348
.0
.016
.0
.0
.001
--
.214
.041
.001
.0
.0
.098
.003
.01
--
--
.001
.676
.0
.0
.004
.0
.002
.001
.225
.001
.001
.0
.001
.0
.005
.017
.0
.004
.045
.196
.018
.015
.071
.0
.01
.003
.0
.005
--
--
--
.12
.006
.002
.002
.001
.0
.003
.003
.003
.001
.049
.0
.0
.002
.0
.001
.003
.0
.002
.003
.003
.001
.159
.014
.0
.001
.002
.002
.0
.0
.0
.184
.006
.003
.02
.0
.0
.0
.003
.046
.001
.074
.003
.0
.024
.0
.001
.004
.512
.222
.895
.009
.012
.0
.0
.048
.006
.0
.001
.001
.001
.01
.078
.004
--
--
.003
.001
.002
.0
.0
.077
.021
.0
.0
.0
.086
.056
.039
.008
.03
.022
.172
.001
.143
.0
.012
.006
.082
.013
.024
.0
.0
.0
.017
.0
.571
.014
.002
.002
.013
.0
.049
.001
.322
.099
.002
.0
.0
.004
.0
.01
.001
.011
.001
.0
.002
.0
.0
.002
.006
.025
.008
.014
.001
.0
.477
.0
.0
.001
.0
.011
.035
.015
.022
.227
.002
.99
.004
.003
.008
.001
.01
.653
.015
.002
.35
.006
.012
.0
.0
.0
.005
.005
.0
.067
.01
.005
.0
.002
.0
.026
.008
.282
.832
.0
.001
.0
.0
.0
.556
.0
.001
.003
.0
.0
.0
.004
.0
.0
.566
.142
.023
.995
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
Gramd1b
T
T
T
T
T
A
C
T
A
C
T
C
C
T
C
A
T
T
C
G
G
T
C
T
A
A
T
T
T
G
A
G
C
A
G
C
T
A
A
G
A
A
A
C
G
G
T
G
C
G
A
T
G
G
A
C
A
C
A
C
A
C
G
A
A
C
C
T
T
A
G
C
G
T
A
C
C
T
A
T
T
A
A
G
T
C
T
G
G
G
A
G
C
T
A
T
C
A
C
C
A
C
A
T
C
C
G
A
C
G
A
T
T
A
A
G
C
T
G
T
C
G
T
G
T
T
T
T
T
G
T
A
A
T
A
C
C
C
A
G
A
C
T
G
C
A
G
T
A
A
A
G
A
A
A
T
G
G
T
A
C
A
T
A
G
A
A
A
C
C
G
T
T
A
G
A
A
G
C
C
C
G
T
G
T
A
C
A
T
T
A
T
G
A
C
T
T
G
C
G
A
T
A
C
T
T
T
T
C
C
T
T
A
C
C
T
G
C
G
T
G
T
G
T
G
A
G
T
T
A
G
C
G
T
C
A
T
C
G
G
A
G
A
T
A
A
C
C
G
A
T
A
G
G
A
C
G
T
A
C
C
C
G
T
C
G
C
G
G
C
A
G
G
T
T
C
G
T
G
G
G
T
A
A
A
T
C
T
T
C
A
A
T
G
G
C
C
G
T
G
T
A
A
G
T
C
A
T
A
C
C
T
T
A
A
T
C
C
G
T
A
T
G
T
T
G
A
C
C
G
C
G
G
C
C
A
G
T
T
G
T
T
A
A
T
G
C
C
C
A
C
T
G
G
G
C
C
A
A
T
G
G
T
T
T
A
G
A
G
A
A
G
G
A
  44,162,578
  44,163,835
  44,172,819
  44,172,891
  44,173,060
  44,173,657
  44,174,027
  44,176,141
  44,177,829
  44,177,955
  44,178,895
  44,178,928
  44,178,929
  44,179,587
  44,180,381
  44,182,056
  44,182,297
  44,183,320
  44,183,531
  44,183,890
  44,184,752
  44,185,180
  44,185,185
  44,188,508
  44,190,659
  44,192,344
  44,192,805
  44,193,471
  44,193,558
  44,193,714
  44,193,721
  44,194,809
  44,197,798
  44,198,091
  44,198,740
  44,201,278
  44,202,214
  44,202,456
  44,202,489
  44,202,573
  44,202,722
  44,203,219
  44,204,692
  44,204,873
  44,204,893
  44,204,980
  44,205,239
  44,205,358
  44,205,555
  44,206,015
  44,206,110
  44,207,829
  44,208,066
  44,208,932
  44,208,963
  44,209,148
  44,209,734
  44,211,561
  44,212,282
  44,212,979
  44,213,075
  44,214,339
  44,214,746
  44,214,856
  44,215,187
  44,215,862
  44,216,254
  44,216,901
  44,216,929
  44,217,300
  44,217,417
  44,217,516
  44,217,758
  44,217,834
  44,217,989
  44,218,201
  44,218,577
  44,219,094
  44,219,681
  44,223,361
  44,225,028
  44,228,577
  44,228,663
  44,229,941
  44,230,724
  44,230,745
  44,232,348
  44,232,387
  44,232,533
  44,233,371
  44,233,917
  44,234,173
  44,234,488
  44,234,988
  44,235,059
  44,235,229
  44,235,249
  44,235,354
  44,235,481
  44,235,542
  44,235,593
  44,235,629
  44,235,713
  44,235,725
  44,235,753
  44,236,411
  44,236,813
  44,237,653
  44,238,006
  44,238,597
  44,238,605
  44,238,791
  44,239,002
  44,239,881
  44,239,986
  44,240,190
  44,240,438
  44,240,452
  44,240,527
  44,240,760
  44,242,102
  44,243,163
  44,247,125
  44,247,154
  44,248,306
  44,248,498
  44,248,524
  44,248,919
  44,249,135
  44,249,527
  44,249,745
  44,250,606
  44,250,998
  44,251,752
  44,251,783
  44,252,123
  44,252,384
  44,252,559
  44,252,632
  44,253,379
  44,253,607
  44,254,141
  44,254,560
  44,254,988
  44,255,040
  44,255,131
  44,255,240
  44,255,565
  44,256,664
  44,257,430
  44,257,662
  44,257,789
  44,258,514
  44,258,631
  44,259,006
  44,262,631
  44,263,182
  44,263,627
  44,264,111
  44,264,664
  44,265,245
  44,266,119
  44,266,623
  44,266,889
  44,267,199
  44,267,248
  44,267,548
  44,268,063
  44,268,723
  44,269,259
  44,269,275
  44,270,075
  44,271,107
  44,271,434
  44,271,814
  44,272,285
  44,272,518
  44,272,708
  44,272,759
  44,273,282
  44,273,558
  44,274,162
  44,274,914
  44,274,960
  44,276,493
  44,278,315
  44,278,721
  44,279,500
  44,279,582
  44,279,585
  44,280,435
  44,280,464
  44,280,725
  44,280,757
  44,281,147
  44,282,023
  44,282,342
  44,282,398
  44,282,481
  44,283,407
  44,283,657
  44,283,752
  44,284,051
  44,284,065
  44,284,451
  44,284,630
  44,285,266
  44,285,654
  44,285,682
  44,285,886
  44,285,925
  44,286,332
  44,286,407
  44,286,829
  44,286,902
  44,287,092
  44,287,147
  44,287,151
  44,287,230
  44,287,588
  44,287,601
  44,287,612
  44,287,888
  44,288,206
  44,288,372
  44,288,582
  44,288,690
  44,288,893
  44,288,954
  44,289,253
  44,290,048
  44,290,161
  44,290,295
  44,290,901
  44,290,928
  44,291,322
  44,291,466
  44,291,779
  44,293,309
  44,293,557
  44,294,306
  44,294,951
  44,295,377
  44,295,756
  44,295,828
  44,296,809
  44,296,872
  44,297,439
  44,298,447
  44,299,429
  44,299,549
  44,299,843
  44,300,152
  44,300,329
  44,300,431
  44,300,646
  44,300,970
  44,301,107
  44,302,078
  44,302,782
  44,303,991
  44,304,174
  44,304,399
  44,305,354
  44,309,578
  44,309,636
  44,310,296
  44,310,387
  44,310,431
  44,311,206
  44,311,244
  44,311,367
  44,316,104
  44,321,417
  44,321,514
  44,321,884
  44,322,099
  44,322,464
  44,322,624
  44,322,939
  44,323,225
  44,325,077
  44,326,489
  44,333,912
  44,334,285
  44,334,456
  44,334,720
  44,339,006
  44,339,347
  44,339,861
  44,341,496
  44,341,605
  44,347,248
  44,347,460
  44,347,728
  44,347,739
  44,347,801
  44,348,653
  44,348,713
  44,348,832
  44,348,851
  44,348,882
  44,349,307
  44,349,506
  44,351,424
  44,351,728
  44,351,751
  44,352,718
  44,353,066
  44,353,721
  44,354,264
  44,354,312
  44,354,567
  44,354,948
  44,355,707
  44,360,170
  44,360,596
  44,362,685
  44,363,651
  44,364,886
  44,365,041
  44,366,144
  44,366,198
  44,367,089
  44,367,502
  44,367,640
  44,367,704
  44,367,733
  44,368,718
  44,369,283
  44,372,161
  44,372,946
  44,373,734
  44,374,080
  44,375,505
  44,377,401
  44,378,791
  44,380,277
  44,380,749
  44,380,884
  44,381,566
  44,382,437
  44,382,548
  44,382,783
  44,382,793
  44,382,832
  44,382,892
  44,383,001
  44,383,011
  44,384,197
  44,385,129
  44,385,532
  44,385,819
  44,385,863
  44,386,002
  44,387,137
  44,387,393
  44,388,608
  44,388,892
  44,389,154
  44,389,268
  44,389,667
  44,390,349
  44,390,419
  44,390,781
  44,391,723
  44,391,896
  44,392,390
  44,394,074
  44,395,801
  44,396,659
  44,396,662
  44,397,125
  44,397,988
C
C
C
C
C
G
T
C
G
T
G
T
T
G
T
G
A
C
T
A
T
C
T
C
G
G
C
C
C
A
G
A
T
G
A
T
C
G
G
A
C
G
T
A
A
A
C
A
A
A
G
G
A
A
G
T
C
T
G
T
C
C/G
C
G
G
T
T
G
C
G
T
T
A
A
G
T
G
A
G
G
C
T
A/C
A
C
T
C
A
T
A
G
A
T
C
G
C
A
G
G
A
G
T
C
C
A
T
A
G
T
A
G
C
C
G
G
C
T
C
A
C
A
A
A
T
C
G
C
C
C
A
C
G
T
C
G
T
A
T
G
T
A/C
T
C
T
T
C
C
C
T
C
G
A
G
G
C
C
T
A
C
G
G
G
C
G
T
T
G
C
T
T
A
C
G
G
T
G
C
A
A
C/G
G
T
C
A
C
G
T
C
C
C
G
C
A
T
T
C
C
A
T
T
G
G
T
T
C
C
T/C
C
T
T
C
C
G
C/T
G
A
A
T
A
A
A
A
A
C
A
C
T
G
C
G
A
T
A
G
T
G
C
G
A
C
G
T
G
C
T
G
T
T
A
T
G
G
A
A
G
C/G
A
C
G
T
T
A
T
C
A
A
T
A
C
T
G
T
C
C
G
T
A
G
A
T
T
C
G
G
T
C
T
C
G
T
G
T
G
C
A
G
G
T
G
A
A
T
G
C
C
G
C
G
G
T
A
C
C
T
G
C
T
T
T
G
G
C
A
C
C
A
G
T
T
A
T
T
A
T
A
C
A
C
C
A
A
C
T
C
A
A
T
T
G
C
T
G
A
A
C
T
T
C
G
C
A
T
A
C
C
G
A
G
A
G
G
C
A
G