Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 115,750 (bp)   Positions: 227
Conservation 
Genes ( + ) 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
WKY/NCrl (RGD) 
.047
.345
.002
.055
.005
.935
.021
.187
.009
.0
.144
.0
.0
.008
.21
.006
--
--
.006
.009
.003
.065
--
.009
.0
.995
.013
.018
.014
.0
.0
.537
.618
.482
.279
.099
.323
.0
.034
.014
.206
.012
.017
.988
.999
.017
.0
.001
.97
.001
.001
.002
.012
.003
.008
.0
.415
.002
.018
.063
.056
.978
.001
.001
.01
.0
.001
.004
.001
.238
.102
.152
.013
.003
--
--
.0
1.0
.983
.0
.002
.002
.037
.001
.0
.001
.0
.015
.508
.64
.007
.872
.008
--
--
--
--
.015
.114
--
--
.018
.008
.007
.134
.006
.001
.002
.004
.005
.008
.059
.0
.003
.002
.022
.017
.001
.004
.018
.005
.1
.223
.03
.104
.182
.037
.043
.021
.564
.848
.081
.001
.019
.001
.005
.001
--
--
--
--
--
--
--
--
--
.024
.202
.009
.005
.006
.003
.01
.0
.084
.22
.144
.002
.003
.015
.789
.004
.004
.0
.003
.013
.004
.018
.0
.01
.02
.214
.0
.02
.156
.067
.015
.224
.004
.002
.0
.002
.073
--
.024
.174
.026
.041
.293
.283
.049
.321
.102
.14
.001
.003
--
--
--
.002
.001
.004
.003
.007
--
.002
.027
.2
.219
.215
.025
.001
.001
.005
.01
.005
.006
.018
.001
.002
.001
.03
.035
.226
.269
.004
.501
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
Gpr63
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
A
A
G
A
G
A
C
C
G
G
A
G
G
G
C
T
A
A
T
A
G
T
A
T
C
G
T
A
G
C
G
C
C
C
A
G
A
T
G
C
C
G
G
C
A
G
G
A
G
A
T
C
C
C
A
G
T
C
A
G
A
A
G
C
C
T
T
G
C
T
C
A
T
A
G
A
G
G
A
T
G
T
T
G
C
A
G
A
G
C
T
G
C
C
G
G
G
C
A
T
C
T
C
A
T
T
C
A
C
C
T
C
A
A
G
T
T
G
A
T
T
T
A
C
C
T
T
A
C
T
T
G
T
T
G
G
G
C
T
A
C
C
G
T
A
T
C
T
C
G
C
C
G
C
C
A
T
C
C
T
G
T
C
G
T
T
C
T
G
A
C
A
T
C
A
G
T
C
A
T
A
A
G
A
G
A
A
T
A
A
G
G
T
A
C
C
T
G
C
G
T
A
A
T
A
T
G
G
A
C
G
A
A
A
C
G
A
T
C
C
A
G
C
T
C
G
  39,260,696
  39,261,222
  39,261,338
  39,261,894
  39,262,215
  39,265,400
  39,265,879
  39,266,133
  39,266,214
  39,266,505
  39,266,675
  39,267,167
  39,268,054
  39,271,052
  39,271,554
  39,271,574
  39,272,207
  39,272,495
  39,272,627
  39,272,791
  39,272,814
  39,272,904
  39,273,120
  39,273,637
  39,273,713
  39,273,775
  39,273,846
  39,273,920
  39,276,169
  39,276,920
  39,276,960
  39,277,085
  39,277,171
  39,277,216
  39,277,564
  39,277,592
  39,278,787
  39,279,232
  39,279,416
  39,279,664
  39,279,722
  39,280,861
  39,280,903
  39,281,476
  39,281,513
  39,281,880
  39,282,360
  39,283,502
  39,284,449
  39,284,885
  39,284,886
  39,284,893
  39,285,814
  39,285,818
  39,285,857
  39,285,945
  39,286,010
  39,286,486
  39,286,572
  39,287,363
  39,287,545
  39,288,146
  39,288,505
  39,288,506
  39,288,551
  39,288,583
  39,288,649
  39,288,769
  39,288,936
  39,289,502
  39,289,520
  39,289,530
  39,289,544
  39,289,993
  39,290,198
  39,290,205
  39,290,428
  39,291,375
  39,291,494
  39,291,622
  39,291,742
  39,291,836
  39,291,838
  39,291,925
  39,291,942
  39,291,978
  39,292,021
  39,292,464
  39,293,506
  39,293,522
  39,293,761
  39,293,807
  39,293,845
  39,294,111
  39,294,300
  39,294,332
  39,294,403
  39,294,420
  39,294,459
  39,299,404
  39,299,645
  39,300,101
  39,300,385
  39,302,520
  39,303,242
  39,303,608
  39,303,625
  39,304,374
  39,304,378
  39,304,702
  39,304,982
  39,305,024
  39,306,825
  39,307,254
  39,307,270
  39,307,303
  39,307,762
  39,307,852
  39,307,982
  39,308,831
  39,308,845
  39,308,957
  39,308,965
  39,309,290
  39,309,504
  39,309,516
  39,309,751
  39,310,043
  39,311,451
  39,311,944
  39,312,031
  39,312,725
  39,313,187
  39,313,305
  39,313,467
  39,313,589
  39,313,595
  39,313,712
  39,313,781
  39,313,784
  39,313,918
  39,314,193
  39,314,220
  39,314,293
  39,314,389
  39,314,401
  39,314,536
  39,314,817
  39,315,294
  39,317,148
  39,317,261
  39,317,885
  39,319,579
  39,320,581
  39,321,221
  39,321,941
  39,321,942
  39,322,290
  39,322,346
  39,322,417
  39,322,518
  39,322,682
  39,323,170
  39,326,023
  39,326,324
  39,326,605
  39,326,625
  39,327,455
  39,329,134
  39,330,329
  39,330,559
  39,331,450
  39,335,115
  39,335,226
  39,335,259
  39,336,499
  39,337,686
  39,339,274
  39,339,295
  39,344,707
  39,348,767
  39,348,841
  39,349,712
  39,350,497
  39,351,576
  39,351,666
  39,351,690
  39,357,741
  39,357,858
  39,357,859
  39,358,007
  39,358,096
  39,358,123
  39,358,144
  39,358,161
  39,358,536
  39,358,753
  39,358,776
  39,358,777
  39,360,411
  39,360,498
  39,360,846
  39,361,329
  39,361,348
  39,361,890
  39,362,082
  39,362,129
  39,362,372
  39,362,397
  39,362,402
  39,362,621
  39,362,784
  39,362,819
  39,363,020
  39,363,024
  39,363,427
  39,363,523
  39,364,366
  39,364,628
  39,364,920
  39,367,834
  39,367,869
  39,367,932
  39,368,070
  39,369,112
  39,371,001
  39,373,891
A
G
G
A
G
A
T
T
T
A
A
G
A
A
C
A
A
G
G
A
C
A
C
T
C
T
A
C
G
T
T
A
T
A
T
G
T
C
A
A
T
T
A
A
A
G
C
A
C
G/T
A/G
T/A
A
G
A
C
A
C
T
G
C
T
T
A
T
T
C
C
T
T
C
T
C
C
C
A
G
A
A
G
C
A
G
C
C
G
T
A
C
A
T
G
C
A
T
C
A
T
A
G
C
T
G
G
T
C
C
T
G
A
T
G
A
G
G
A
C
C
A
G
C
C
C
G
A
T
C
A
G
G
C
C
A
C
C
C
C
A
T
G
G
T
A
A
C
G
C
T
C
T
A
T
T
A
G
T
T
C
T
T
A
A
C
T
A
C
C
T
C
A
T
T
G
T/C
T
G
A
C
T
G
C
G
G
A
G
C
G
G
C
T
C
A
T
C
G
T
T
C
T
T
A
C
G
T
T/A
G
A
A
A
G
T
A
G
C
G
T
A
G
C
T
T
T
T
T
C
T
T