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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 274,095 (bp)   Positions: 535
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
.004
.998
.109
.46
.872
.0
.002
.004
.303
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.087
.01
.0
.0
.008
.037
.011
.0
.001
.001
.998
.0
.0
.019
.009
.0
.622
.982
.04
.001
.022
.002
--
--
--
--
--
--
.0
.002
.02
.0
.001
.187
.001
.0
.001
.011
.003
.0
.071
.011
.003
--
.0
--
--
--
--
--
--
--
.015
.002
.001
.0
.007
.075
.0
.0
.001
.0
.001
.0
.021
.001
.018
.776
.001
.001
.0
.003
1.0
1.0
.0
.002
.0
.017
.0
.003
.007
.0
.025
.0
.0
.0
.013
.0
.003
.017
.319
.003
--
.0
.001
.002
.013
.009
1.0
.474
1.0
.001
.001
.018
.003
.004
.0
.012
.356
.006
.057
1.0
.001
.037
.001
.0
.0
.0
.004
.065
.0
.0
.002
.045
.001
.013
.0
.072
.003
.002
.998
.0
.0
.0
.0
.042
.001
.003
.0
.176
.059
.0
.001
.001
.009
.998
1.0
1.0
.0
.0
.0
.012
.007
.002
.169
.534
.001
.019
.001
.09
.0
.0
.001
.0
.0
.008
.005
.001
.003
.017
.002
.001
.028
.29
.0
.0
.001
.002
.013
.005
.002
.0
.045
.0
.002
.004
.105
.072
.009
.0
.0
.057
.072
.127
.01
.0
.002
.011
.0
.0
.0
.092
.841
.931
.972
.001
.039
.0
.007
.002
.0
.009
.0
.707
.003
.072
.0
.005
.0
.0
.004
.0
.021
.018
.773
.042
--
--
--
--
--
--
--
--
--
--
--
--
.119
.043
.022
.014
.004
.001
.001
.006
.0
.002
.006
.004
.005
.009
.025
.053
.054
.038
.006
.0
.001
.002
.002
.003
.005
.005
.01
.017
.013
.002
.022
.063
.195
.148
.0
.009
.003
.023
.149
.088
.056
.0
.001
.002
.001
.001
.005
.004
.037
.101
.103
.0
.001
.006
.012
.007
.001
.133
.087
.017
.019
.015
.055
.073
.096
.003
.001
.0
.002
.002
.0
.001
.003
.002
.013
.005
.01
.002
.004
.006
.002
.012
.036
.134
.065
.045
.003
.024
.049
.072
.049
.128
.017
.002
.008
.148
.088
.064
.111
.091
.133
.001
.0
.125
.372
.625
.516
.456
.161
.074
.066
.002
.066
.043
.018
.034
.012
.006
.005
.044
.012
.005
.01
--
--
--
--
--
--
--
--
--
--
.154
.929
.001
.007
.0
.006
.09
.0
.0
.001
.0
.011
.003
.006
.001
.002
.017
.0
.011
.003
.005
.001
.001
.008
.0
.001
.078
.094
.005
.001
.0
.001
.008
.132
.028
.016
.025
.019
.0
.001
.002
.002
.003
.003
.016
.016
.015
.0
.001
.003
.005
.118
.133
.008
.0
.004
.032
.0
.0
.003
.001
.005
.001
.003
.371
.019
.282
.172
.132
.089
.179
.078
.008
.009
.001
.028
.071
.035
.041
.042
.046
.01
.164
.068
.183
.0
.004
.011
.009
.002
.005
.008
--
--
--
--
--
--
--
--
--
--
--
--
--
.057
.002
.007
.003
.002
.091
.091
.107
.006
.003
.028
.013
.016
--
.001
.021
.001
.006
.011
.053
.003
.001
.002
.0
.245
.931
.039
.0
.05
.001
.993
.001
.941
.987
.0
.004
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
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--
--
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
Gli3
T
G
-
2
2
T
T
T
-
T
-
G
C
A
G
C
T
C
T
A
A
A
G
-
G
C
G
A
A
A
T
T
C
-
A
-
-
A
A
C
A
C
G
T
A
A
A
-
-
A
C
T
2
A
G
A
C
G
T
T
-
G
-
A
A
C
-
-
-
A
C
A
C
-
G
C
A
T
G
5
T
T
A
C
T
A
A
G
G
A
C
A
G
T
T
-
A
T
C
T
C
G
C
2
G
T
T
A
G
C
G
T
2
T
T
A
T
C
-
G
G
G
C
G
7
T
C
G
G
-
-
A
G
-
A
C
A
T
T
A
C
2
6
T
G
C
-
-
C
T
A
T
C
G
G
T
A
G
2
-
T
G
G
T
A
A
C
C
T
C
T
T
T
C
T
C
T
-
T
A
G
A
T
G
-
T
-
C
C
-
A
A
A
-
G
A
T
C
T
A
A
-
T
C
C
G
A
-
A
G
G
A
C
A
G
5
3
C
G
C
A
G
C
A
A
C
A
A
-
T
T
T
C
C
-
A
-
G
G
G
C
-
G
-
A
T
C
G
A
T
G
C
A
-
T
C
-
-
A
A
C
T
4
-
A
G
T
A
T
G
T
A
T
-
-
3
C
T
-
-
A
T
T
T
C
T
A
-
T
G
G
A
-
-
-
2
T
G
G
A
T
C
T
C
A
G
G
-
T
A
G
G
T
C
G
G
C
C
2
-
T
A
T
A
T
T
-
G
3
G
-
T
T
T
2
C
C
C
-
T
C
G
4
G
C
A
G
T
G
A
C
2
C
-
3
2
T
G
C
T
G
C
T
T
-
-
-
T
C
C
A
A
G
-
2
C
-
T
A
A
T
G
-
-
T
G
G
-
G
C
C
G
-
T
C
C
G
T
T
T
G
C
C
C
C
C
T
A
G
G
3
T
-
C
-
C
C
G
C
A
T
-
2
-
T
-
T
-
-
-
-
T
T
T
C
T
-
-
T
A
T
-
G
T
T
G
T
T
-
T
C
C
T
A
G
C
A
T
A
A
G
-
-
-
-
T
A
A
-
-
A
-
G
C
C
-
G
-
A
T
3
T
A
A
-
C
A
G
C
-
T
T
-
-
C
T
A
-
C
-
2
-
C
T
A
C
G
-
-
C
-
-
-
T
C
A
A
A
A
G
G
A
C
C
12
C
-
C
T
G
A
G
A
T
A
  52,311,794
  52,313,104
  52,313,511
  52,313,513
  52,313,660
  52,314,383
  52,314,385
  52,314,387
  52,315,258
  52,316,634
  52,318,076
  52,318,192
  52,318,762
  52,318,934
  52,319,268
  52,319,371
  52,319,724
  52,320,190
  52,320,746
  52,320,944
  52,320,946
  52,320,948
  52,321,057
  52,322,294
  52,322,971
  52,323,051
  52,323,218
  52,323,261
  52,323,388
  52,323,493
  52,323,909
  52,325,687
  52,326,916
  52,328,733
  52,329,023
  52,330,581
  52,330,918
  52,331,103
  52,331,380
  52,331,610
  52,331,731
  52,332,006
  52,333,165
  52,333,348
  52,333,886
  52,336,274
  52,336,466
  52,336,603
  52,336,647
  52,336,990
  52,337,399
  52,339,698
  52,340,344
  52,342,018
  52,343,100
  52,343,433
  52,343,884
  52,346,630
  52,346,776
  52,346,811
  52,346,895
  52,346,915
  52,346,936
  52,346,943
  52,346,948
  52,346,957
  52,346,962
  52,347,012
  52,348,627
  52,348,865
  52,350,128
  52,350,920
  52,351,393
  52,352,029
  52,352,038
  52,353,040
  52,354,108
  52,354,258
  52,354,623
  52,354,677
  52,355,641
  52,356,710
  52,356,761
  52,356,786
  52,356,829
  52,356,871
  52,358,112
  52,359,439
  52,362,505
  52,362,927
  52,363,068
  52,363,379
  52,363,380
  52,363,590
  52,363,943
  52,364,388
  52,364,453
  52,364,949
  52,365,193
  52,365,744
  52,367,095
  52,369,055
  52,371,168
  52,372,038
  52,372,104
  52,372,791
  52,373,135
  52,373,394
  52,373,419
  52,373,757
  52,373,854
  52,373,910
  52,373,974
  52,376,427
  52,376,908
  52,377,025
  52,377,184
  52,377,195
  52,377,262
  52,378,321
  52,378,369
  52,378,791
  52,378,849
  52,379,033
  52,379,515
  52,380,137
  52,380,179
  52,380,411
  52,381,166
  52,382,023
  52,384,347
  52,388,011
  52,390,660
  52,393,476
  52,395,639
  52,400,444
  52,406,944
  52,406,950
  52,407,262
  52,408,336
  52,408,596
  52,411,245
  52,411,270
  52,411,877
  52,412,249
  52,412,296
  52,412,703
  52,413,439
  52,413,600
  52,415,962
  52,417,442
  52,418,866
  52,420,125
  52,422,530
  52,424,085
  52,426,169
  52,426,186
  52,426,513
  52,427,367
  52,427,825
  52,428,112
  52,428,406
  52,428,733
  52,429,092
  52,429,424
  52,429,868
  52,430,287
  52,430,750
  52,430,775
  52,430,846
  52,430,881
  52,431,173
  52,431,339
  52,432,066
  52,432,082
  52,432,472
  52,433,230
  52,433,930
  52,434,089
  52,435,653
  52,437,091
  52,437,284
  52,437,289
  52,437,312
  52,437,324
  52,437,434
  52,437,463
  52,437,575
  52,437,606
  52,437,795
  52,437,818
  52,439,462
  52,440,708
  52,444,967
  52,445,988
  52,448,146
  52,448,174
  52,448,566
  52,448,744
  52,451,112
  52,451,458
  52,454,290
  52,454,449
  52,459,292
  52,460,046
  52,460,563
  52,460,627
  52,461,108
  52,462,119
  52,462,250
  52,465,216
  52,466,452
  52,466,868
  52,467,967
  52,468,064
  52,468,066
  52,468,146
  52,468,202
  52,468,641
  52,468,932
  52,469,623
  52,472,131
  52,472,232
  52,472,599
  52,472,651
  52,473,428
  52,475,572
  52,475,683
  52,476,067
  52,483,263
  52,484,093
  52,486,268
  52,488,884
  52,489,539
  52,494,205
  52,494,317
  52,494,708
  52,494,814
  52,494,899
  52,494,921
  52,495,100
  52,495,455
  52,495,466
  52,495,469
  52,496,171
  52,497,504
  52,497,505
  52,497,536
  52,497,644
  52,497,731
  52,497,808
  52,497,853
  52,498,308
  52,498,452
  52,498,473
  52,498,484
  52,498,817
  52,498,825
  52,498,832
  52,498,839
  52,498,844
  52,498,854
  52,498,879
  52,498,888
  52,498,900
  52,498,903
  52,498,919
  52,498,920
  52,498,925
  52,498,937
  52,498,950
  52,498,959
  52,498,972
  52,498,974
  52,498,976
  52,498,980
  52,498,992
  52,498,993
  52,498,999
  52,499,002
  52,499,007
  52,499,015
  52,499,020
  52,499,029
  52,499,039
  52,499,045
  52,499,061
  52,499,071
  52,499,077
  52,499,081
  52,499,087
  52,499,093
  52,499,105
  52,499,109
  52,499,124
  52,499,143
  52,499,160
  52,499,169
  52,499,172
  52,499,189
  52,499,199
  52,499,205
  52,499,224
  52,499,326
  52,499,327
  52,499,335
  52,499,342
  52,499,349
  52,499,358
  52,499,361
  52,499,362
  52,499,369
  52,499,421
  52,499,422
  52,499,447
  52,499,452
  52,499,469
  52,499,472
  52,499,487
  52,499,492
  52,499,497
  52,499,498
  52,499,510
  52,499,522
  52,499,526
  52,499,531
  52,499,536
  52,499,541
  52,499,543
  52,499,547
  52,499,551
  52,499,554
  52,499,559
  52,499,570
  52,499,574
  52,499,608
  52,499,613
  52,499,623
  52,499,627
  52,499,632
  52,499,638
  52,499,654
  52,499,681
  52,499,707
  52,499,727
  52,499,735
  52,499,740
  52,499,779
  52,499,787
  52,499,789
  52,499,796
  52,499,802
  52,499,807
  52,499,831
  52,499,837
  52,499,857
  52,499,885
  52,499,890
  52,499,897
  52,499,908
  52,499,920
  52,499,932
  52,499,974
  52,499,978
  52,499,983
  52,499,986
  52,500,016
  52,500,029
  52,500,035
  52,500,055
  52,500,060
  52,500,061
  52,500,067
  52,500,107
  52,500,115
  52,500,126
  52,500,136
  52,500,151
  52,500,160
  52,500,168
  52,500,177
  52,500,189
  52,500,192
  52,500,193
  52,503,396
  52,503,453
  52,503,510
  52,503,518
  52,503,528
  52,503,965
  52,504,147
  52,504,159
  52,504,344
  52,504,493
  52,504,901
  52,504,984
  52,505,474
  52,505,558
  52,506,044
  52,506,108
  52,506,292
  52,506,556
  52,506,558
  52,506,881
  52,507,003
  52,508,434
  52,508,474
  52,509,020
  52,509,391
  52,510,223
  52,512,644
  52,512,886
  52,512,936
  52,512,948
  52,514,033
  52,515,252
  52,515,253
  52,515,254
  52,515,384
  52,516,421
  52,516,444
  52,517,105
  52,517,136
  52,517,241
  52,518,344
  52,518,348
  52,518,352
  52,518,357
  52,518,361
  52,518,362
  52,518,365
  52,518,367
  52,518,374
  52,518,394
  52,518,396
  52,518,397
  52,518,403
  52,518,411
  52,518,414
  52,518,418
  52,518,426
  52,518,447
  52,518,452
  52,518,461
  52,518,463
  52,518,469
  52,518,478
  52,518,497
  52,518,519
  52,518,530
  52,520,159
  52,521,051
  52,521,600
  52,521,695
  52,522,254
  52,522,938
  52,523,306
  52,523,660
  52,523,947
  52,524,096
  52,524,406
  52,524,423
  52,524,427
  52,524,430
  52,524,450
  52,524,492
  52,524,539
  52,524,562
  52,524,572
  52,524,633
  52,524,663
  52,524,686
  52,524,690
  52,524,691
  52,524,721
  52,524,802
  52,525,196
  52,525,384
  52,526,414
  52,526,856
  52,528,339
  52,528,410
  52,528,961
  52,529,381
  52,529,959
  52,530,053
  52,531,474
  52,531,481
  52,531,485
  52,531,494
  52,531,567
  52,531,690
  52,531,693
  52,531,788
  52,531,832
  52,531,838
  52,531,855
  52,531,867
  52,531,891
  52,535,841
  52,535,856
  52,535,883
  52,535,932
  52,535,947
  52,535,977
  52,535,982
  52,535,988
  52,536,004
  52,536,010
  52,536,025
  52,536,043
  52,536,044
  52,536,056
  52,537,530
  52,537,690
  52,537,977
  52,538,793
  52,540,095
  52,540,345
  52,540,825
  52,541,463
  52,541,848
  52,542,876
  52,543,295
  52,544,111
  52,545,059
  52,546,018
  52,546,112
  52,546,675
  52,546,749
  52,547,722
  52,551,878
  52,556,560
  52,559,973
  52,561,841
G
C
5
-
-
T/A
A
A
2
C
5
C
T
T
A
A
A
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C
T
T
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C
A
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4
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2
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11
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3
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8
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6
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2
2
3
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2
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2
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