Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 30,805 (bp)   Positions: 127
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
MHS/Gib (RGD) 
.059
.0
.0
.0
.827
.011
.001
1.0
.003
.0
.002
.026
.509
.495
.0
.003
.024
.021
.001
.0
.0
.003
.009
.0
.183
.0
.13
.002
.004
.0
.003
.019
.027
.004
.0
.008
.0
.0
.002
.002
.0
.001
.006
.013
.001
.004
.014
.012
.001
.003
.01
--
--
--
.673
.566
.033
.002
.014
.01
.095
.118
.001
.246
.004
.007
.419
.258
.244
.183
.088
.094
.0
.0
.01
.002
.011
.002
.002
.001
.0
.043
.021
.007
.062
.086
.014
.0
.028
.0
.001
.295
.798
.292
.023
.005
.001
.003
.055
.0
.001
.006
.025
.146
.026
.01
.008
.883
.003
.046
.003
.0
.0
.0
.001
.688
.958
.015
.002
.009
.044
.149
.001
.002
.01
.001
.065
--
--
--
--
--
LOC102547959
LOC102547959
LOC102547959
LOC102547959
LOC102547959
LOC102547959
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Gen1
Gen1
Gen1
Gen1
Gen1
Gen1
Gen1
Gen1
Gen1
Gen1
Gen1
Gen1
Gen1
A
A
T
T
T
C
A
A
T
A
A
C
G
C
C
C
C
T
A
G
C
T
A
C
T
C
C
A
A
T
A
G
A
T
G
G
A
A
G
A
G
T
C
A
C
G
G
T
T
A
T
A
C
C
T
G
C
G
C
T
C
C
A
G
A
G
T
T
C
G
G
T
G
A
G
A
A
T
A
A
A
T
C
G
A
A
C
C
A
G
C
C
C
T
T
C
G
A
T
G
C
C
C
C
T
A
C
G
C
A
T
C
C
T
T
G
A
A
T
T
G
A
C
C
T
A
T
  36,910,580
  36,911,361
  36,911,579
  36,911,766
  36,912,346
  36,913,016
  36,913,195
  36,913,241
  36,913,546
  36,913,714
  36,914,583
  36,915,109
  36,915,240
  36,915,241
  36,916,241
  36,918,425
  36,918,506
  36,918,843
  36,919,613
  36,919,639
  36,919,666
  36,919,684
  36,919,692
  36,920,058
  36,920,110
  36,920,161
  36,921,519
  36,922,187
  36,922,329
  36,922,535
  36,922,764
  36,922,928
  36,923,050
  36,923,353
  36,923,539
  36,923,830
  36,924,029
  36,924,039
  36,924,155
  36,924,205
  36,924,327
  36,924,518
  36,924,721
  36,924,734
  36,924,748
  36,924,955
  36,924,993
  36,925,374
  36,925,803
  36,925,945
  36,926,029
  36,927,813
  36,927,831
  36,928,021
  36,928,093
  36,928,101
  36,928,192
  36,928,673
  36,928,701
  36,928,741
  36,928,846
  36,929,017
  36,929,109
  36,929,309
  36,929,319
  36,929,406
  36,929,466
  36,929,484
  36,929,608
  36,929,710
  36,929,715
  36,929,832
  36,930,016
  36,930,060
  36,930,124
  36,930,192
  36,930,196
  36,930,226
  36,930,266
  36,930,274
  36,930,378
  36,930,792
  36,930,820
  36,930,832
  36,931,057
  36,931,077
  36,931,345
  36,931,369
  36,931,602
  36,931,631
  36,931,667
  36,931,843
  36,931,855
  36,931,866
  36,932,031
  36,932,070
  36,932,134
  36,932,192
  36,932,350
  36,932,579
  36,932,612
  36,932,711
  36,932,810
  36,933,344
  36,933,423
  36,933,609
  36,933,886
  36,934,389
  36,934,713
  36,934,720
  36,934,789
  36,934,983
  36,935,029
  36,935,083
  36,935,084
  36,935,266
  36,935,394
  36,935,421
  36,935,431
  36,935,766
  36,936,033
  36,936,316
  36,937,284
  36,937,629
  36,938,457
  36,939,160
  36,940,066
G
C
C
C
C
T
T
C
C
T
T
T
C
T
A
T
T
C
C
A
T
C
G
T
C
T
T
T
T
C
G
A
G
C
C
A
G
G
T
G
A
G
T
G
T
A
A
C
C
G
C
G
A
G
A
C
A
C
T
C
T
T
G
A
G
A
C
C
T
G/T
G/T
G
T
T
A
G
T
A
G
G
G
C
A
C
G
T
G
T
G
C
T
T
T
C
C
T
A
G
G
C
T
T
T
A
G
G
T
A
T
G
C
T
T
C
C
A
G
G
C
G
T
T
A
A
C
T
C