Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 231,114 (bp)   Positions: 588
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
.0
.0
.0
.27
.018
.002
.0
.0
.0
.002
.018
.002
.016
.002
.009
.013
.012
.002
.001
.013
.295
.02
.001
.006
.004
.013
.014
.012
.132
.484
.002
.007
.037
.026
.027
.978
.056
.015
.015
.02
.002
.032
.019
.216
.354
.77
.288
.149
.063
.069
.007
.009
.001
.008
.001
.002
.005
.012
.0
.001
.001
.01
.012
.001
.0
.001
.0
.049
.002
.017
.033
.0
.0
.001
.008
.003
.003
.009
.814
.222
.141
.001
.0
.008
.023
.05
.068
.006
.002
.001
.301
.007
.006
.033
.0
.0
.0
.001
.01
.0
.005
.0
.0
.037
.003
.001
.423
.331
.006
.013
.0
.219
.001
.0
.007
.035
.001
.0
.016
.04
.423
.005
.234
.004
.002
.0
.001
.009
.001
.001
.011
.0
.001
.01
.0
.019
.001
.001
.409
.108
.135
.033
.008
.0
.0
.002
.0
.018
.589
.001
.081
.0
.007
.007
.006
.006
.015
.012
.049
.184
.01
.004
.202
.093
.065
.003
.142
.001
.001
.0
.148
.182
.053
.033
.021
.022
.0
.001
.005
.0
.0
.023
.016
.016
.0
.0
.0
.014
.0
.0
.016
.093
.001
.085
.0
.014
.013
.375
.001
.005
.005
.0
.0
.001
.0
.004
.008
.001
.006
.005
.007
.195
.068
.071
.232
.179
.179
.034
--
.002
.115
.011
.001
.002
.0
.007
.004
.011
.006
.034
.003
.001
.031
.046
.147
.013
.6
.018
.283
.325
.331
.182
.093
.99
.001
.001
.198
.005
.0
.002
.013
.0
.0
.009
.259
.244
.009
.017
.001
.001
.001
--
--
--
--
--
--
.002
.0
.001
.016
.002
.003
.028
.032
.003
.005
.054
.037
.021
.018
.003
.002
.001
.032
.436
.451
.459
.511
.002
.112
.044
.002
.036
.047
.001
.068
.057
.035
.565
.004
.002
.002
.005
.004
.038
.045
.057
.006
.924
.001
--
--
.018
.002
.002
.002
.014
.131
.374
.263
.476
.047
.013
.176
.005
.004
.012
.025
.058
.078
.22
.034
.068
.001
.006
.004
.0
.057
.0
.3
.0
.0
.0
.001
.002
.004
.02
.009
.006
.0
.004
.007
.288
.0
.002
.0
.085
.005
.0
.001
.122
--
.002
.001
.0
.0
.001
.0
.007
.0
.0
.001
.001
.049
.033
.001
.03
.007
.015
.001
.024
.033
.0
.095
.012
.0
.0
.002
.001
.001
.0
.0
.0
.006
--
.258
.998
1.0
.0
.029
.0
.0
.124
.006
.036
.026
.012
.027
.042
.028
.02
.055
.117
.001
.038
.033
.271
.003
.005
.008
.063
.026
.001
.001
.013
.0
.001
.025
.002
.002
.002
.004
.018
.003
--
.015
.0
.0
.0
.0
.0
.001
.34
.588
.317
.0
.003
.006
.009
.069
.0
.0
.003
.061
.066
.001
.0
.001
.0
.0
.032
.001
.011
.001
.002
.004
.0
.0
.003
.0
.0
.001
.0
.004
--
--
--
.001
.0
.0
.0
.0
.002
.0
.0
.001
.0
.132
.186
.009
.021
.005
.0
.006
.009
.0
.0
.005
.0
.016
.0
.001
.002
.097
.006
.007
.034
.001
.037
.003
.001
.015
.003
.155
.011
.002
.994
.992
.755
.008
.0
.002
.001
.004
.039
.002
.002
.026
.012
.013
.0
.001
.032
.002
.001
.0
.0
.021
.0
.003
.001
.059
.103
.001
.029
.002
.004
.005
.007
.983
.003
.0
.0
.007
.0
.003
.007
.008
.018
.001
.035
.0
.011
.002
.001
.063
.013
.016
.067
.001
.071
.0
.0
.0
--
--
--
.247
.0
.001
.992
.001
.136
.001
.003
.0
.003
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
Gabrb3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
G
T
2
G
-
A
-
-
C
A
C
C
C
C
T
A
C
C
-
-
G
C
2
T
-
-
C
2
6
C
A
A
T
C
A
-
-
C
-
A
C
T
C
C
-
-
T
C
-
T
-
C
T
G
G
C
-
-
C
C
-
-
G
C
T
T
T
-
G
-
T
-
G
-
T
-
-
-
T
A
C
T
-
G
T
-
T
C
C
-
T
-
G
C
A
A
C
T
C
A
T
G
T
G
-
A
4
C
A
A
G
-
T
A
T
-
-
G
G
C
T
-
G
G
C
C
G
-
T
G
C
T
A
C
A
T
4
T
A
C
G
4
3
A
T
G
T
T
C
A
C
-
-
G
A
-
C
C
T
A
C
T
G
C
C
T
G
A
T
A
C
T
-
G
-
A
G
T
T
G
-
G
G
A
T
C
C
T
C
G
T
C
G
C
C
A
C
C
A
T
G
A
T
G
C
G
-
C
A
C
T
C
C
3
2
14
-
C
T
A
G
G
G
G
G
C
C
C
-
T
G
C
C
A
-
4
G
-
-
-
-
T
G
G
-
T
G
T
T
A
T
T
G
A
A
T
A
C
C
C
G
C
G
6
C
T
A
A
G
-
-
-
-
-
-
-
T
-
A
T
C
T
G
A
-
-
G
2
A
A
T
T
10
G
A
-
3
-
C
A
A
C
C
A
-
T
-
T
T
A
A
C
A
C
C
5
A
5
-
C
A
G
T
A
-
G
T
3
T
G
T
C
T
T
G
C
T
A
T
A
T
T
T
A
T
C
C
A
10
T
A
G
G
T
G
A
G
T
A
T
G
8
C
C
G
G
G
A
G
T
7
A
C
A
-
-
-
-
-
G
T
T
T
G
A
G
A
T
C
C
-
C
G
T
G
G
A
C
G
A
A
T
C
A
T
G
T
G
A
A
A
G
T
T
T
-
A
C
-
G
10
G
C
G
G
C
A
G
A
A
A
T
G
G
T
C
C
T
G
T
T
G
T
G
T
A
A
G
G
A
G
G
-
G
G
G
C
A
C
A
-
A
C
G
G
T
G
A
A
C
C
C
C
A
T
G
G
A
G
G
G
G
C
G
C
T
T
G
C
T
A
T
C
C
A
A
G
A
C
G
C
A
G
G
A
G
T
T
-
C
G
C
G
G
C
A
-
A
T
T
A
C
A
T
T
T
T
-
C
T
C
G
G
A
C
G
T
G
C
A
T
A
T
A
G
T
C
C
A
-
G
C
T
C
C
G
G
-
A
A
C
G
G
C
-
A
G
4
T
C
G
T
T
G
C
G
G
T
A
T
A
-
14
C
A
G
T
  113,034,659
  113,034,726
  113,034,851
  113,034,977
  113,035,006
  113,037,084
  113,037,091
  113,037,103
  113,037,104
  113,037,109
  113,038,687
  113,041,030
  113,041,213
  113,041,223
  113,041,231
  113,041,234
  113,041,240
  113,041,264
  113,041,269
  113,041,273
  113,041,315
  113,041,360
  113,041,365
  113,041,381
  113,041,405
  113,041,424
  113,041,444
  113,041,459
  113,041,474
  113,041,514
  113,041,538
  113,041,540
  113,041,551
  113,041,554
  113,041,621
  113,041,669
  113,041,732
  113,041,788
  113,041,806
  113,041,821
  113,041,835
  113,041,856
  113,041,865
  113,041,943
  113,041,953
  113,042,080
  113,042,099
  113,042,149
  113,042,165
  113,042,173
  113,043,587
  113,043,657
  113,043,680
  113,043,691
  113,043,714
  113,043,720
  113,043,721
  113,043,735
  113,043,783
  113,043,787
  113,043,819
  113,043,860
  113,043,898
  113,043,968
  113,044,011
  113,044,015
  113,044,025
  113,044,045
  113,044,080
  113,044,115
  113,044,130
  113,044,154
  113,044,162
  113,044,184
  113,044,216
  113,044,321
  113,044,379
  113,044,387
  113,044,450
  113,044,455
  113,044,461
  113,044,479
  113,044,483
  113,044,508
  113,044,516
  113,044,517
  113,044,559
  113,044,605
  113,044,608
  113,046,431
  113,047,501
  113,048,492
  113,050,248
  113,051,089
  113,051,444
  113,051,824
  113,052,099
  113,052,342
  113,052,509
  113,052,756
  113,053,014
  113,053,212
  113,053,425
  113,053,450
  113,053,608
  113,053,621
  113,053,769
  113,053,909
  113,054,487
  113,054,566
  113,054,655
  113,054,784
  113,055,253
  113,055,295
  113,055,826
  113,056,957
  113,057,165
  113,057,212
  113,057,339
  113,057,654
  113,060,768
  113,061,145
  113,062,466
  113,062,650
  113,065,501
  113,065,531
  113,065,758
  113,065,762
  113,065,803
  113,066,204
  113,066,591
  113,068,222
  113,068,304
  113,068,333
  113,068,572
  113,069,804
  113,070,669
  113,070,862
  113,071,081
  113,071,109
  113,071,207
  113,071,265
  113,071,350
  113,071,626
  113,071,792
  113,071,799
  113,072,038
  113,072,069
  113,072,166
  113,072,456
  113,072,606
  113,072,695
  113,072,742
  113,072,743
  113,072,745
  113,072,747
  113,072,752
  113,072,816
  113,072,914
  113,072,957
  113,073,029
  113,073,209
  113,073,378
  113,073,428
  113,073,652
  113,073,882
  113,073,924
  113,074,401
  113,074,418
  113,074,441
  113,074,659
  113,074,689
  113,074,795
  113,075,267
  113,075,270
  113,075,435
  113,076,340
  113,076,760
  113,076,823
  113,077,034
  113,077,215
  113,077,554
  113,077,710
  113,077,947
  113,078,027
  113,078,260
  113,078,340
  113,078,427
  113,078,560
  113,078,582
  113,078,946
  113,079,211
  113,079,226
  113,079,255
  113,079,581
  113,079,900
  113,080,079
  113,080,148
  113,080,360
  113,080,393
  113,080,812
  113,081,939
  113,087,267
  113,087,970
  113,088,474
  113,089,563
  113,089,588
  113,090,215
  113,090,582
  113,091,746
  113,092,573
  113,093,184
  113,093,733
  113,093,862
  113,093,968
  113,094,039
  113,094,043
  113,094,153
  113,095,318
  113,097,702
  113,097,833
  113,097,850
  113,097,872
  113,097,875
  113,097,971
  113,098,170
  113,099,842
  113,099,857
  113,099,858
  113,100,547
  113,100,575
  113,100,580
  113,100,586
  113,100,587
  113,100,590
  113,100,950
  113,101,564
  113,104,265
  113,104,667
  113,104,685
  113,104,688
  113,104,698
  113,105,449
  113,108,508
  113,109,456
  113,110,678
  113,112,160
  113,112,525
  113,113,104
  113,116,518
  113,118,279
  113,121,840
  113,121,879
  113,122,202
  113,122,792
  113,122,794
  113,124,780
  113,125,216
  113,126,048
  113,126,340
  113,126,456
  113,126,911
  113,126,982
  113,127,086
  113,127,232
  113,127,250
  113,127,337
  113,127,752
  113,127,868
  113,128,754
  113,129,204
  113,129,208
  113,129,213
  113,129,218
  113,129,221
  113,129,229
  113,129,237
  113,129,262
  113,129,269
  113,129,832
  113,131,461
  113,132,013
  113,132,050
  113,132,351
  113,132,740
  113,132,764
  113,132,766
  113,132,768
  113,132,770
  113,133,242
  113,133,351
  113,133,368
  113,133,369
  113,133,863
  113,134,057
  113,134,088
  113,134,408
  113,134,411
  113,134,415
  113,134,439
  113,135,516
  113,135,606
  113,135,656
  113,135,661
  113,135,662
  113,135,759
  113,135,761
  113,135,780
  113,135,896
  113,135,956
  113,136,184
  113,136,607
  113,136,671
  113,136,867
  113,136,916
  113,136,983
  113,137,231
  113,137,282
  113,137,652
  113,137,703
  113,137,716
  113,137,757
  113,137,806
  113,137,821
  113,137,867
  113,138,098
  113,138,583
  113,138,820
  113,139,206
  113,139,222
  113,139,434
  113,139,505
  113,139,639
  113,139,717
  113,139,854
  113,139,929
  113,140,376
  113,140,511
  113,140,721
  113,140,833
  113,140,963
  113,141,254
  113,141,312
  113,141,432
  113,141,616
  113,141,619
  113,141,904
  113,142,075
  113,142,215
  113,142,572
  113,142,637
  113,143,003
  113,143,381
  113,143,755
  113,144,406
  113,144,837
  113,145,043
  113,145,166
  113,145,449
  113,145,900
  113,145,979
  113,146,687
  113,146,811
  113,146,824
  113,147,630
  113,147,713
  113,147,762
  113,148,251
  113,148,355
  113,152,561
  113,154,573
  113,154,682
  113,155,146
  113,155,206
  113,155,664
  113,155,725
  113,155,860
  113,155,869
  113,156,136
  113,156,138
  113,156,609
  113,157,382
  113,158,061
  113,158,065
  113,158,988
  113,160,205
  113,160,325
  113,160,349
  113,160,457
  113,160,575
  113,160,614
  113,160,952
  113,161,147
  113,161,153
  113,161,563
  113,161,891
  113,162,033
  113,162,781
  113,162,842
  113,163,187
  113,163,438
  113,163,837
  113,164,072
  113,164,186
  113,164,614
  113,165,013
  113,166,900
  113,166,942
  113,167,300
  113,167,335
  113,167,420
  113,168,070
  113,168,080
  113,168,089
  113,168,178
  113,168,312
  113,168,613
  113,168,826
  113,169,435
  113,169,438
  113,169,477
  113,169,536
  113,169,634
  113,169,889
  113,169,975
  113,169,998
  113,170,150
  113,170,151
  113,170,197
  113,170,270
  113,170,318
  113,170,354
  113,170,451
  113,170,545
  113,170,788
  113,171,230
  113,171,471
  113,171,493
  113,171,584
  113,171,613
  113,171,641
  113,172,023
  113,172,111
  113,172,330
  113,172,394
  113,172,475
  113,172,708
  113,172,809
  113,172,827
  113,173,080
  113,173,234
  113,173,291
  113,173,454
  113,173,595
  113,173,691
  113,173,692
  113,174,136
  113,174,394
  113,174,423
  113,174,533
  113,174,908
  113,175,156
  113,175,460
  113,175,553
  113,175,643
  113,175,653
  113,175,858
  113,176,227
  113,176,339
  113,177,457
  113,178,400
  113,178,472
  113,179,414
  113,179,415
  113,179,736
  113,180,034
  113,180,087
  113,180,138
  113,180,324
  113,180,668
  113,180,672
  113,180,676
  113,180,680
  113,180,799
  113,181,354
  113,181,475
  113,182,717
  113,182,899
  113,183,167
  113,183,346
  113,183,566
  113,183,628
  113,184,654
  113,184,658
  113,185,062
  113,185,232
  113,185,362
  113,185,923
  113,186,050
  113,186,586
  113,186,878
  113,186,900
  113,186,981
  113,187,608
  113,188,319
  113,188,722
  113,189,311
  113,189,332
  113,190,083
  113,190,540
  113,190,624
  113,190,629
  113,190,646
  113,191,493
  113,191,755
  113,191,842
  113,192,060
  113,193,431
  113,193,500
  113,193,546
  113,193,636
  113,193,867
  113,193,993
  113,194,197
  113,194,508
  113,195,007
  113,195,227
  113,195,420
  113,195,451
  113,195,788
  113,196,206
  113,196,492
  113,196,908
  113,197,575
  113,197,626
  113,197,803
  113,198,154
  113,198,170
  113,199,092
  113,199,105
  113,199,289
  113,199,808
  113,200,196
  113,200,553
  113,200,677
  113,201,175
  113,201,460
  113,203,217
  113,203,230
  113,203,420
  113,204,244
  113,204,511
  113,204,819
  113,204,927
  113,204,932
  113,205,086
  113,207,336
  113,207,337
  113,211,867
  113,214,862
  113,215,291
  113,218,293
  113,223,357
  113,223,643
  113,231,787
  113,234,353
  113,236,772
  113,237,555
  113,238,270
  113,238,641
  113,239,556
  113,240,186
  113,242,850
  113,243,546
  113,243,924
  113,244,243
  113,247,285
  113,247,324
  113,253,625
  113,255,640
  113,255,689
  113,256,338
  113,257,053
  113,258,663
  113,259,756
  113,260,371
  113,260,936
  113,264,177
G
C
A
-
T
C
-
3
3
G
G
T
-
-
-
-
-
-
-
T
A
-
-
-
-
C
G
-
-
-
G
C
-
-
-
-
G
G
-
C
-
-
-
-
-
2
C
-
-
G
-
G
T
-
-
A
G
A
A
-
-
G
G
-
-
-
-
-
T
-
T
-
2
-
A
-
T
A
A
-
-
-
G
G
T
G
G
-
A
T
T
C
42
-
T
-
C
T
A
T
T
C
C
C
A
4
G
-
A
C
T
A
A
C
T
G
17
C
T
A
T
C
T
A
A
T
T
T
T
C
C
G
C
G
T
G
C
-
C
C
G
A
-
-
G
C
A
C
C
T
C
T
2
T
C
-
A
T
T
C
C
T
-
A
A
-
A
T
G
C
G
T
G
3
A
2
G
A
A
C
A
T
A
C
G
C
A
T
C
T
A
C
T
T
T
G
G
T
T
C
A
A
T
G
A
T
A
C
A
T
T
A
T
G
-
-
-
2
-
C
-
-
T
T
A
A
T
T
T
G/A
A
A
G
T
G
G
-
A
A
A
T
G
C
T
A
2
-
A
C
G
G
C
C
A
G
G
-
G
T
G
T
A
T
A
-
A
A
T
T
A
G
T
G
A
T
3
G
G
6
T
A
T
-
A
G
A
2
A
-
T
T
A
A
-
A
T
A
-
3
T
C
G
A
T
G
-/14
T/G
C
C
C
G
G
G
T
A
T
-
G
-
2
T
T
T
C
G
9
C
C
-
G
A
-
T
C
G
A
T
C
G
C
T
A
C
G
G
C
G
A
G
-
G
G
A
T
C
T
C
T
C
C
C
-
8/-
T
T
A
A
A
-
A
C
-
C
T
-
T
G
9
-/8
-/6
A
C
-
C
A
G
A
G
C
G
T
C
-
A
G
C
A
C
T
A
G
C
C
G
G
C
A
C
C
G
G
C
T
C
C
A
2
G
-
T
C
-
A
-
T
A
T
T
A
G
G
C
A
A
A
G
T
T
C
A
G
C
A
C
A
C
G
G
A
A
G
A
T
A
C
A
A
T
G
T
G
C
G
G
A
A
C
C
C
G
A
A
A
T
G
C
T
A
C
A
A
A
A
T
A
T
C
C
A
T
G
T
C
T
A
G
G
T
C
T
A
T
-
A
T
G
A
A
C
2
T
T
T
T
T
T
G
2
T
C
C
C
T
G
-
C
C
C
9
A
C
T
-
A
T
T
A
A
T
T
G
A
G
G
C
A
C
-
-
G
C
A
T
A
T
A
A
A
T
-
G
T
A
T
T
T
-
A
-
A
A
C
-
C
A
T
C
A
A
G
G
G
8
14/-
T
G
T
G