Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 43,653 (bp)   Positions: 118
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SHRSP/A3NCrl (2019) 
.911
.807
.603
.0
.403
.01
.007
--
.002
.003
.002
.013
.011
.006
.0
.0
.148
.816
.012
.002
.005
.001
.001
.001
.0
.0
.0
.0
.0
.027
.019
.005
.0
.011
.001
.332
.005
.001
--
--
.055
.729
.501
.666
.952
.997
.298
.002
.018
.002
.03
.04
.001
.004
.001
.001
.002
.002
.001
.163
.457
.108
.133
.018
.048
--
.074
.048
.484
.001
.002
.432
.299
.0
.015
.141
.181
.993
.957
.998
.773
.015
.01
.013
.167
.011
.031
.003
.125
.989
.999
1.0
.998
1.0
.619
.993
.993
.005
.035
.871
.997
1.0
1.0
1.0
1.0
1.0
1.0
1.0
1.0
1.0
1.0
1.0
1.0
1.0
1.0
.999
1.0
1.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Gabpb1
Gabpb1
Gabpb1
Gabpb1
Gabpb1
Gabpb1
Gabpb1
Gabpb1
Gabpb1
Gabpb1
Gabpb1
Gabpb1
T
T
98
C
-
C
T
-
C
G
A
-
-
T
G
T
A
A
G
A
A
-
G
T
T
7
-
-
G
2
2
G
-
-
-
G
A
A
-
-
C
G
T
T
A
C
A
A
C
-
T
A
C
-
G
-
A
-
-
C
C
T
G
C
C
T
C
T
A
-
-
A
-
T
G
C
T
T
G
G
A
3
C
G
-
A
-
-
A
-
-
-
G
-
G
-
-
C
A
-
2
T
T
-
G
-
-
-
G
G
2
-
A
G
T
T
T
G
  119,092,286
  119,092,440
  119,093,446
  119,094,159
  119,095,136
  119,095,419
  119,097,315
  119,097,538
  119,098,331
  119,098,839
  119,098,840
  119,099,065
  119,099,109
  119,099,422
  119,099,972
  119,100,033
  119,100,561
  119,100,687
  119,101,818
  119,101,822
  119,101,826
  119,101,834
  119,101,836
  119,101,838
  119,101,848
  119,101,850
  119,101,907
  119,101,910
  119,101,918
  119,101,962
  119,101,967
  119,101,970
  119,101,973
  119,101,978
  119,101,996
  119,102,385
  119,102,916
  119,103,217
  119,104,969
  119,105,043
  119,105,536
  119,106,171
  119,106,387
  119,107,185
  119,107,209
  119,107,778
  119,107,880
  119,110,898
  119,112,846
  119,114,569
  119,116,313
  119,116,743
  119,118,087
  119,118,285
  119,120,931
  119,122,102
  119,122,425
  119,124,156
  119,124,665
  119,125,326
  119,125,352
  119,125,505
  119,125,527
  119,125,782
  119,126,139
  119,127,127
  119,129,601
  119,130,025
  119,130,199
  119,131,892
  119,131,894
  119,132,162
  119,132,254
  119,132,524
  119,132,822
  119,132,855
  119,132,864
  119,133,247
  119,133,259
  119,133,293
  119,133,325
  119,133,912
  119,134,603
  119,134,773
  119,134,931
  119,134,939
  119,134,944
  119,134,952
  119,134,956
  119,134,965
  119,134,974
  119,134,978
  119,134,987
  119,134,995
  119,135,008
  119,135,024
  119,135,026
  119,135,042
  119,135,046
  119,135,055
  119,135,071
  119,135,144
  119,135,149
  119,135,159
  119,135,162
  119,135,177
  119,135,182
  119,135,200
  119,135,207
  119,135,209
  119,135,219
  119,135,238
  119,135,254
  119,135,261
  119,135,271
  119,135,272
  119,135,291
  119,135,299
C
C
-
T
2
T
C
2
T
T
T
11
G
G
A
C
G
G
-
-
-
T
C
C
G
-
C
C
-
-
-
-
C
T
A
A
G
G
3
26
A
T
C
G
G
T
G
G
T
A
C
G
T
G
A
A
G
A
4
T
G
C
A
T
T
C
T
C
C
2
34
-
2
G
T
G
G
G
A
A
G
-
T
A
G
-
G
G
-
2
C
A
C
C
-
C
G
-
C
C
-
-
-
A
-
C
A
C
-
A
-
C
-
-
-
G
-
-