Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 95,076 (bp)   Positions: 233
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
ACI/EurMcwi (MCW) 
.0
.001
.998
1.0
.001
.0
.0
.001
.0
.0
.003
.006
.008
.0
.005
.001
.0
.005
.0
.007
--
.023
.004
.043
.0
.001
.74
.003
.0
.001
.001
.014
.014
.0
.004
.0
.023
.001
.081
.0
.002
.001
.011
.002
.087
.846
.0
.0
.0
.0
.0
.0
.029
.005
.003
.129
.011
.006
.0
.0
.001
.064
.011
.001
.073
.075
.044
.0
.0
.001
.024
.001
.002
.0
.164
.274
.159
.003
.001
.0
.022
.001
.026
.001
.006
.0
.002
.001
.236
.001
.0
.009
.945
.0
.002
.0
.0
.0
.02
.013
.01
.0
.007
.0
.0
.023
.086
.054
.039
.076
.0
.0
.017
.0
.002
.113
.015
.141
.0
.248
.001
.008
.0
.128
.0
.001
.505
.539
.001
.459
.001
.0
.001
.013
.001
.0
.021
.001
.001
.0
.0
.0
.0
.016
.192
.001
.0
.0
.003
.006
.008
.329
.772
.795
.001
.0
.002
.0
.002
.002
.0
.378
.212
.041
.0
.002
.004
.006
.001
.0
.0
.002
.0
.0
.913
.002
.001
.008
.015
.0
.006
.001
.689
.998
.024
.029
.192
.142
.65
.006
.0
.0
.021
.016
.0
.0
.0
.0
.0
.015
.001
.017
.007
.028
.028
.044
--
--
--
--
--
--
--
--
.035
.009
.0
.005
.0
.886
.01
.023
.002
.002
.03
.269
.004
.003
.0
.0
.874
.011
.0
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
Flrt2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
T
C
C
G
C
G
T
G
C
C
C
A
G
T
A
T
C
C
A
T
G
T
G
G
G
G
T
T
T
T
G
A
T
C
T
T
C
T
C
T
T
A
T
G
A
T
A
T
T
A
T
G
G
C
A
C
G
C
C
T
G
C
C
T
C
C
G
T
C
C
G
A
A
C
C
C
T
G
T
G
T
T
T
A
T
T
G
C
C
G
G
G
C
G
A
C
T
A
G
G
C
G
A
C
G
C
G
G
A
G
A
T
C
T
A
G
C
A
C
T
A
G
G
G
A
C
C
A
A
G
C
T
C
G
A
G
C
C
T
C
C
G
G
G
T
A
T
T
A
G
A
T
G
C
C
G
A
G
C
C
A
A
T
A
G
G
G
G
C
C
C
A
T
T
T
A
C
G
A
G
C
T
T
C
A
A
T
A
G
A
C
A
T
T
G
C
T
A
C
T
G
A
T
A
A
C
G
A
T
G
G
G
T
T
C
G
T
T
G
C
T
G
A
T
G
C
C
T
C
T
T
C
  119,522,892
  119,522,919
  119,523,148
  119,527,586
  119,530,238
  119,530,264
  119,534,157
  119,536,311
  119,536,976
  119,537,254
  119,537,720
  119,539,172
  119,539,173
  119,539,186
  119,540,690
  119,541,884
  119,543,536
  119,543,548
  119,543,618
  119,544,295
  119,544,855
  119,545,276
  119,545,570
  119,545,575
  119,546,400
  119,547,156
  119,547,221
  119,548,118
  119,548,590
  119,548,705
  119,548,718
  119,549,526
  119,550,188
  119,550,285
  119,550,299
  119,550,501
  119,552,957
  119,553,316
  119,553,500
  119,553,989
  119,554,023
  119,554,027
  119,554,136
  119,554,576
  119,554,653
  119,554,772
  119,555,279
  119,555,281
  119,555,444
  119,555,480
  119,555,754
  119,556,050
  119,556,433
  119,556,642
  119,556,725
  119,556,907
  119,557,448
  119,557,628
  119,558,861
  119,559,369
  119,559,710
  119,559,908
  119,560,307
  119,560,370
  119,562,944
  119,562,973
  119,563,125
  119,563,380
  119,563,600
  119,563,827
  119,563,913
  119,564,227
  119,564,461
  119,564,547
  119,565,587
  119,565,703
  119,565,924
  119,566,550
  119,566,731
  119,567,098
  119,568,086
  119,568,512
  119,568,783
  119,569,198
  119,569,985
  119,574,290
  119,576,292
  119,576,711
  119,576,785
  119,581,590
  119,582,574
  119,583,703
  119,584,339
  119,584,532
  119,584,592
  119,585,222
  119,585,413
  119,585,538
  119,585,559
  119,585,702
  119,585,713
  119,585,797
  119,586,048
  119,586,101
  119,586,534
  119,587,105
  119,587,199
  119,587,220
  119,587,224
  119,587,432
  119,587,896
  119,587,996
  119,588,139
  119,588,551
  119,589,219
  119,589,375
  119,589,554
  119,589,990
  119,590,851
  119,590,984
  119,591,080
  119,591,266
  119,591,273
  119,591,286
  119,591,308
  119,591,410
  119,591,418
  119,591,427
  119,591,576
  119,591,843
  119,591,896
  119,592,111
  119,592,214
  119,592,509
  119,592,598
  119,592,979
  119,593,249
  119,593,367
  119,593,487
  119,593,541
  119,593,560
  119,593,635
  119,593,727
  119,593,830
  119,593,869
  119,594,115
  119,594,362
  119,594,465
  119,594,520
  119,594,903
  119,595,191
  119,595,226
  119,595,306
  119,595,316
  119,595,506
  119,595,591
  119,595,695
  119,595,883
  119,595,998
  119,597,382
  119,597,879
  119,598,171
  119,598,893
  119,599,096
  119,599,142
  119,599,518
  119,599,587
  119,599,623
  119,599,801
  119,599,874
  119,600,102
  119,600,630
  119,600,633
  119,600,743
  119,600,865
  119,601,319
  119,601,332
  119,601,476
  119,601,480
  119,601,496
  119,601,512
  119,601,599
  119,601,609
  119,601,723
  119,601,784
  119,601,785
  119,601,802
  119,601,804
  119,601,945
  119,602,066
  119,602,071
  119,602,106
  119,602,211
  119,602,277
  119,602,301
  119,602,308
  119,602,339
  119,602,372
  119,602,379
  119,602,521
  119,602,555
  119,602,575
  119,602,647
  119,602,924
  119,603,021
  119,603,065
  119,603,290
  119,603,355
  119,603,430
  119,603,463
  119,603,556
  119,603,630
  119,603,646
  119,603,681
  119,603,764
  119,603,851
  119,603,895
  119,603,901
  119,604,155
  119,604,427
  119,604,649
  119,604,665
  119,604,674
  119,604,685
  119,604,974
  119,605,091
  119,605,434
  119,605,877
  119,606,276
  119,611,985
  119,612,749
  119,612,952
  119,613,194
G
C
G
T
A
T
A
G
A
T
G
T
G
G/A
C
C
G
T
T
T
C
A
C
A
A
T
A
C
C
G
C
C
C
C
T
C
C
T
A
C/G
T/G
T/G
T
C
A
G
C
G
G
C
C
G
T
A
G
G
A
A
T
T
G
T
T
T
A
T
T
A
C
A
T
A
C
C
T
G
T
C
C
C
A
C
C
C
C
C
A
T
T
T
A
C
A
G
T
G
T
A
T
A
A
A
C
G
T
A
T
C
T
G
A
G
A
T
C
C
A
G
G
T
A
G
A
A
A
G
T
T
T
T
A
T
C
T
A
G
A
G
A
C
T
T
A
A
A
C
G
A
C
C
T
G
C
T
T
T
A
G
A
T
T
G
G
A
G
C
A
A
C
G
T
T
T
T/G
C
A
G
T
T
C
A
T
C
A
T
G
G
G
G
A
G
T
T
G
C
A
G
C
G
G
C
A
G
G
C
G
A
T
G
C
C
A
C
C
C
T
A
C
A
T
T
A
T
T
C
A
A
A
G
A
G
C
T