Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 68,752 (bp)   Positions: 173
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
LEXF1C/Stm (2019) 
.001
.001
.923
1.0
.154
.0
.299
.0
.0
.002
.001
.0
.0
.003
.042
.135
.0
.0
.033
.0
.004
.001
.001
.001
.001
.002
.0
.0
.029
.035
.284
.006
.019
--
--
--
.01
.001
.0
.0
.0
.725
.755
.027
.011
.0
.071
.002
.001
.004
.385
.09
.001
.03
.01
.024
.024
.003
--
.076
--
.093
.008
.168
.011
.049
.003
.105
.045
.024
.267
.072
.213
.189
.081
.036
.009
.0
.0
.001
.003
.086
.021
.003
.006
.006
.898
.342
.383
--
--
.0
.281
.113
.106
.998
.001
.0
.091
.85
.954
.043
.008
.015
.009
.012
.015
.026
.01
.056
.306
.004
.008
.44
.002
.009
.033
.001
.059
--
--
--
--
--
.031
.05
.326
--
--
.009
.007
.023
.622
.004
.176
.024
.076
.104
.11
--
--
.065
.734
.852
.011
.014
.004
.002
.02
.001
.002
.0
.0
.024
.442
.027
.02
.007
.0
.0
.001
.024
.003
.0
.116
.0
.109
.489
.12
.047
.029
.045
.068
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
Fermt2
G
G
G
G
C
T
C
T
C
G
T
C
G
T
G
C
T
A
G
C
C
A
-
-
T
T
A
G
C
A
T
C
C
T
T
2
A
G
T
G
-
-
G
C
T
G
A
G
15
A
14
C
G
G
G
T
G
G
T
-
C
A
C
T
T
C
A
A
A
G
2
C
G
-
-
C
-
G
T
A
T
A
A
A
T
-
-
G
A
C
A
T
-
A
T
C
A
G
A
A
T
-
A
A
G
-
G
G
-
T
A
A
A
G
G
4
C
A
G
T
C
G
G
A
G
-
C
A
G
C
A
C
C
G
G
A
A
G
G
G
C
G
C
11
3
T
A
T
T
G
A
C
C
G
A
C
3
T
3
7
A
A
T
C
C
T
C
2
2
A
-
-
G
  19,809,134
  19,809,522
  19,810,946
  19,810,985
  19,811,180
  19,812,252
  19,812,296
  19,812,803
  19,812,805
  19,813,176
  19,813,622
  19,814,228
  19,814,230
  19,814,266
  19,814,951
  19,815,263
  19,816,075
  19,816,210
  19,816,744
  19,816,951
  19,817,001
  19,817,080
  19,817,657
  19,818,181
  19,818,957
  19,820,978
  19,821,804
  19,821,827
  19,821,984
  19,822,172
  19,822,251
  19,822,290
  19,822,300
  19,822,337
  19,822,341
  19,822,344
  19,822,351
  19,822,972
  19,823,361
  19,823,403
  19,823,498
  19,824,581
  19,824,789
  19,825,849
  19,825,881
  19,826,150
  19,826,525
  19,827,209
  19,827,361
  19,827,494
  19,828,103
  19,828,271
  19,829,325
  19,830,112
  19,830,372
  19,830,861
  19,831,230
  19,831,903
  19,833,102
  19,833,967
  19,834,395
  19,834,955
  19,835,188
  19,835,278
  19,835,418
  19,836,057
  19,836,571
  19,836,946
  19,837,362
  19,837,716
  19,837,866
  19,838,526
  19,838,684
  19,838,773
  19,838,922
  19,839,545
  19,839,580
  19,842,209
  19,842,515
  19,842,618
  19,842,873
  19,843,558
  19,844,574
  19,844,580
  19,844,581
  19,844,630
  19,845,624
  19,845,895
  19,845,897
  19,847,920
  19,848,016
  19,848,469
  19,849,179
  19,849,431
  19,849,432
  19,849,610
  19,850,500
  19,850,558
  19,850,587
  19,850,740
  19,851,293
  19,851,794
  19,851,841
  19,852,371
  19,852,625
  19,852,695
  19,852,940
  19,854,451
  19,855,494
  19,855,507
  19,855,527
  19,856,632
  19,856,633
  19,857,087
  19,857,368
  19,858,892
  19,859,281
  19,859,348
  19,859,411
  19,859,652
  19,859,832
  19,860,125
  19,860,167
  19,860,183
  19,860,364
  19,860,512
  19,860,638
  19,860,982
  19,861,333
  19,861,547
  19,861,944
  19,862,028
  19,862,314
  19,862,336
  19,862,441
  19,862,611
  19,862,736
  19,862,764
  19,862,765
  19,863,419
  19,863,421
  19,865,545
  19,865,584
  19,866,501
  19,866,515
  19,867,101
  19,867,247
  19,867,572
  19,867,835
  19,869,464
  19,870,229
  19,870,916
  19,871,138
  19,871,264
  19,871,382
  19,871,388
  19,871,390
  19,871,393
  19,871,396
  19,871,400
  19,871,480
  19,871,773
  19,871,895
  19,871,986
  19,872,248
  19,872,838
  19,874,343
  19,876,403
  19,876,421
  19,876,434
  19,876,442
  19,876,446
  19,876,485
A
A
A
A
A
C
T
C
T
A
C
G
C
A
A
T
C
G
A
T
T
C
A
2
A
C
C
A
A
T
C
T
A
-
-
2/-
C
A
C
A
11
A
A
T
C
A
C
C
-
C
14/-
T
A
A
A
C
C
C
G
5
A
C
A
C
C
T
G
G
G
A
-
T
A
2
A
T
4
T
C
G
G
T
-
T
G
8
17
A
T
T
T
C
A
T
A
T
G
T
G
G
C
4
C
G
A
A
A
A
5
C
G
T
C
A
A
-
A
G
A
C
A
T
A
G
T
2
T
T
A
T
G
T
A
A
A
G
C
C
A
T
T
T
T
-
-
A
T
C
C
C
G
T
A
C
G
A
-
G
-
-
T
G
C
T
-
G
T
-
-
C
C
C
A