Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 367,627 (bp)   Positions: 131
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
BN-Lx/CubMcwi (2019) 
.071
.101
.001
.001
.013
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.016
.0
.0
.045
.039
.021
.001
.002
.003
.001
.002
.004
.002
.11
.205
.177
.052
.088
.064
.054
.003
.002
--
--
--
--
--
--
--
--
--
--
--
--
--
.034
--
--
--
--
.002
.0
.026
.055
.51
.516
.626
.902
.895
.986
.014
.333
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.003
.059
--
--
--
--
--
--
--
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.14
--
--
--
--
--
--
--
--
--
.002
Faf1
Faf1
Faf1
Faf1
Faf1
Faf1
Faf1
Faf1
Faf1
Faf1
Faf1
Faf1
Faf1
Faf1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
-
A
C
A
G
C
T
2
C
C
C
C
A
A
G
G
A
G
G
C
T
C
G
G
C
C
2
G
2
2
T
3
-
T
T
T
A
C
G
2
2
T
T
T
C
T
-
2
-
T
T
G
3
7
3
G
2
3
T
C
G
T
C
T
G
G
G
G
G
A
G
G
G
T
-
C
G
T
G
G
C
A
G
T
G
G
G
A
C
G
C
T
C
G
T
G
C
A
-
A
C
G
A
T
A
G
G
A
G
T
C
G
T
A
T
T
C
T
A
-
C
A
T
A
G
T
C
T
G
A
  129,379,535
  129,392,419
  129,403,985
  129,404,028
  129,404,042
  129,417,958
  129,418,023
  129,418,063
  129,418,147
  129,418,158
  129,418,169
  129,418,437
  129,418,485
  129,418,528
  129,419,412
  129,421,119
  129,421,130
  129,421,139
  129,421,149
  129,421,150
  129,421,661
  129,421,687
  129,421,692
  129,421,694
  129,448,029
  129,461,672
  129,461,676
  129,468,609
  129,468,619
  129,468,623
  129,468,629
  129,468,634
  129,468,639
  129,468,656
  129,468,659
  129,468,674
  129,468,679
  129,468,691
  129,468,702
  129,468,706
  129,468,709
  129,468,734
  129,468,739
  129,468,742
  129,468,758
  129,468,759
  129,468,773
  129,468,781
  129,468,785
  129,468,796
  129,468,801
  129,468,804
  129,468,809
  129,468,814
  129,468,819
  129,468,905
  129,468,909
  129,468,912
  129,468,920
  129,487,856
  129,502,584
  129,502,630
  129,504,235
  129,504,244
  129,523,497
  129,523,498
  129,523,538
  129,523,542
  129,523,625
  129,523,627
  129,523,635
  129,523,646
  129,523,651
  129,523,667
  129,530,659
  129,536,476
  129,544,774
  129,560,102
  129,560,117
  129,560,125
  129,560,141
  129,560,168
  129,560,200
  129,560,464
  129,560,478
  129,560,479
  129,561,966
  129,562,567
  129,562,982
  129,579,032
  129,583,313
  129,583,530
  129,588,524
  129,588,527
  129,588,534
  129,588,646
  129,595,230
  129,609,260
  129,609,267
  129,614,494
  129,647,947
  129,650,869
  129,653,807
  129,653,843
  129,653,881
  129,654,133
  129,654,220
  129,654,233
  129,655,460
  129,656,385
  129,656,733
  129,656,801
  129,656,835
  129,672,991
  129,672,996
  129,678,511
  129,680,164
  129,680,240
  129,680,498
  129,680,607
  129,688,916
  129,692,390
  129,692,419
  129,692,432
  129,692,475
  129,692,530
  129,694,560
  129,695,136
  129,695,217
  129,695,596
  129,716,400
C
16
T
-
-
G/C
C/A
T/C
2/-
C/T
C/T
C/A
C/T
A/C
A/G
G/A
G/T
A/T
G/T
G/T
C/T
T/C
C/A
G/A
-
T
T
-
-
-
-
-
-
T
-
-
-
-
-
T
-
-
-
C
C
A
-
C
-
2
-
-
-
-
-
-
-
-
-
C
C/T
G/C
T/A
C/A
-
A
-
-
-
-
-
-
-
-
G
4
T
G/T
T/A
G/A
G/A
C/T
A/G
G/T
T/C
G/A
T
G/A
A/T
A
A
A
T/A
C/T
G/A
T/C
G/C
-
-
A
-
-
G/A
A/C
T/-
A/C
G/A
G/C
A/T
G/A
T/C
C/T
G/A
A
-
T/A
T/G
C/T
T/C
A/C
A
G
C
G
C
A
T/C
C/A
T/C
G/A
C