Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 92,121 (bp)   Positions: 194
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
ACI/EurMcwi (RGD) 
.0
.026
.0
.01
.003
.042
.0
.0
.0
.001
.0
.0
.639
.009
.004
.0
.0
.001
.003
.0
.035
.765
.628
.001
.0
.001
.125
.001
.0
.003
.045
.0
.002
.0
.007
.0
.007
.024
.0
.0
.006
.263
.0
.01
.07
.0
.194
.588
--
--
--
.657
.539
.004
.004
.001
.081
.145
.001
.001
.0
.002
.001
.0
.001
.0
.001
.0
.0
.0
.062
.0
.037
.007
.01
.0
.007
.001
.001
.12
.007
.01
.0
.01
.013
.001
.03
.026
.015
.007
.049
.004
.007
.316
.485
.187
.013
.046
.146
.001
.002
.068
.001
.967
.729
.001
.0
.851
.999
.0
.274
.0
.006
.0
.0
.002
.027
.015
.002
.124
.005
.003
.018
.006
.018
.017
.027
.002
.009
.0
.002
.004
.002
.0
.0
.001
.0
.52
.01
.0
.008
.071
.001
1.0
.001
.01
.012
.004
.0
.044
.132
.274
.119
.0
.08
.998
.001
.001
.013
--
.01
.011
.003
.002
.004
.0
.012
.0
.044
.003
.01
.0
.077
--
.0
.003
.008
.083
.277
.04
1.0
.992
.0
.003
.017
.0
.008
.052
.01
.0
.001
.005
--
--
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
Dnajc5b
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
G
C
T
G
G
T
T
C
C
A
T
T
A
C
C
C
A
G
C
A
G
C
G
T
A
T
A
T
T
C
T
T
A
C
A
T
G
T
T
C
C
T
G
A
C
A
C
C
C
C
C
G
G
C
G
G
G
T
A
C
C
G
A
C
C
C
T
G
T
C
T
A
A
T
C
A
T
A
G
A
T
A
C
A
A
A
T
G
C
C
A
G
G
C
G
A
C
T
A
A
A
G
C
T
C
T
G
G
G
C
T
C
G
G
A
A
C
C
C
A
T
A
C
G
A
G
A
G
T
C
T
C
G
G
C
A
C
T
C
C
T
A
C
C
G
T
C
A
A
G
T
G
A
A
A
C
G
A
T
C
T
A
G
A
T
G
T
C
A
G
G
C
T
C
A
G
T
T
A
T
C
A
A
C
G
G
T
G
C
A
C
A
G
  104,291,039
  104,291,322
  104,291,669
  104,291,816
  104,292,048
  104,292,147
  104,292,313
  104,292,439
  104,292,477
  104,292,593
  104,293,399
  104,293,424
  104,293,901
  104,294,333
  104,294,471
  104,294,610
  104,294,671
  104,295,009
  104,295,542
  104,295,935
  104,297,344
  104,297,418
  104,297,582
  104,297,732
  104,297,784
  104,298,164
  104,298,253
  104,298,944
  104,301,059
  104,301,836
  104,302,141
  104,302,929
  104,303,053
  104,304,014
  104,304,579
  104,304,644
  104,304,665
  104,304,781
  104,305,238
  104,305,832
  104,305,864
  104,306,251
  104,306,465
  104,307,059
  104,307,797
  104,308,845
  104,309,419
  104,310,125
  104,310,562
  104,310,656
  104,310,672
  104,310,783
  104,310,800
  104,311,093
  104,311,680
  104,311,962
  104,312,067
  104,312,089
  104,312,134
  104,312,357
  104,312,490
  104,312,505
  104,312,665
  104,312,759
  104,314,776
  104,315,235
  104,315,280
  104,315,327
  104,315,503
  104,315,504
  104,315,893
  104,316,102
  104,316,337
  104,316,816
  104,317,278
  104,317,511
  104,317,592
  104,317,702
  104,317,872
  104,318,294
  104,318,784
  104,319,361
  104,319,372
  104,319,506
  104,320,275
  104,320,390
  104,320,857
  104,320,890
  104,321,173
  104,321,192
  104,322,607
  104,322,651
  104,322,660
  104,322,763
  104,323,187
  104,323,431
  104,323,733
  104,324,235
  104,324,344
  104,325,531
  104,325,773
  104,326,091
  104,326,882
  104,327,052
  104,327,381
  104,327,484
  104,327,542
  104,327,745
  104,327,811
  104,328,124
  104,328,167
  104,328,524
  104,328,569
  104,328,932
  104,329,660
  104,329,717
  104,329,994
  104,330,079
  104,330,275
  104,330,464
  104,330,966
  104,331,043
  104,331,093
  104,331,410
  104,331,414
  104,331,417
  104,331,618
  104,331,684
  104,331,799
  104,331,937
  104,332,727
  104,332,843
  104,333,247
  104,333,312
  104,333,419
  104,333,895
  104,334,083
  104,334,134
  104,334,388
  104,334,433
  104,334,692
  104,334,744
  104,335,116
  104,335,315
  104,336,012
  104,337,019
  104,337,446
  104,337,820
  104,337,848
  104,338,194
  104,339,163
  104,339,560
  104,339,927
  104,341,159
  104,342,718
  104,343,006
  104,343,389
  104,343,558
  104,344,541
  104,347,690
  104,347,786
  104,347,854
  104,348,095
  104,348,125
  104,348,342
  104,348,843
  104,348,910
  104,349,115
  104,349,230
  104,349,406
  104,350,034
  104,352,493
  104,353,265
  104,355,071
  104,356,314
  104,356,328
  104,356,836
  104,356,849
  104,359,518
  104,360,609
  104,362,169
  104,362,241
  104,362,316
  104,362,568
  104,363,886
  104,364,539
  104,366,288
  104,366,639
  104,366,997
  104,367,167
  104,373,352
  104,373,538
  104,378,116
  104,378,117
C
T
G
C
A
C
G
C
T
T
G
C
C
G
A
T
T
G
A
T
T
A
T
A
G
C
C
C
C
C
A
C
C
G
T
G
C
A
C
C
T
T
C
A
T
T
G
T
T
T
A
A
A
A
T
A
A
A
G
G
A
G
A
G
T
T
T
C
A
A
A
C
T
T
C
T
C
C
G
T
G
C
G
T
G
G
G
G
A
T
T
T
A
A
T
A
G
T
A
C
C
C
T
T
C
T
C
A
A
A
T
G
T
A
T
C
G
T
A
T
G
G
T
T
A
G
A
G
A
C
T
C
T
T
A
G
G
T
C
G
A
G
G
G
G
A
C
T
G
G
A
C
A
G
T
C
T
A
G
G
G
G
G
A
G
A
A
G
A
G
T
A
G
C
T
G
A
C
C
G
C
T
G
G
T
T
A
C
C
T
C
A
G
A