Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 74,406 (bp)   Positions: 91
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
COP/CrCrl (MCW & UW) 
.008
.002
.004
.442
.001
.013
.064
--
.038
.055
.004
.0
.15
.452
.001
.011
.013
.003
.005
.026
.026
.0
.002
.005
.009
.012
.002
1.0
.92
.043
.079
.009
.03
.001
.998
.002
.015
.072
.0
.0
.01
.001
.001
.032
.007
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.007
.0
.008
.004
.002
.033
.0
.035
.885
.001
.001
.019
.008
--
--
--
--
.009
.009
.046
.001
.001
.003
.006
.423
.017
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Dcdc2c
Dcdc2c
Dcdc2c
Dcdc2c
Dcdc2c
Dcdc2c
Dcdc2c
Dcdc2c
Dcdc2c
Dcdc2c
A
G
A
G
T
C
G
A
C
A
G
A
A
G
G
C
T
T
C
G
T
C
G
G
C
A
A
T
G
T
A
A
G
G
T
G
C
A
G
A
T
A
A
A
C
C
G
A
G
T
G
T
T
G
A
G
C
G
G
C
T
C
C
G
C
A
C
C
A
T
G
T
T
C
A
A
G
A
T
A
G
G
A
A
G
G
A
A
T
C
A
  47,766,293
  47,766,325
  47,766,329
  47,766,380
  47,777,549
  47,778,075
  47,779,303
  47,779,686
  47,780,382
  47,780,722
  47,780,781
  47,781,016
  47,781,583
  47,781,662
  47,782,738
  47,782,764
  47,783,154
  47,783,354
  47,783,572
  47,783,590
  47,783,677
  47,784,153
  47,784,778
  47,784,847
  47,784,929
  47,785,882
  47,785,964
  47,786,153
  47,786,244
  47,786,500
  47,786,504
  47,787,737
  47,787,861
  47,789,251
  47,789,500
  47,790,194
  47,790,222
  47,790,335
  47,790,519
  47,790,537
  47,790,764
  47,790,947
  47,790,960
  47,791,242
  47,791,661
  47,791,792
  47,791,803
  47,791,902
  47,792,150
  47,792,271
  47,792,405
  47,792,462
  47,792,519
  47,792,867
  47,793,157
  47,793,162
  47,793,164
  47,793,174
  47,793,190
  47,793,218
  47,793,463
  47,793,689
  47,793,730
  47,793,762
  47,793,773
  47,794,716
  47,794,730
  47,794,781
  47,795,136
  47,797,067
  47,797,705
  47,797,891
  47,798,757
  47,799,291
  47,799,706
  47,799,910
  47,800,278
  47,801,501
  47,803,088
  47,803,175
  47,803,179
  47,803,242
  47,803,923
  47,803,924
  47,804,032
  47,804,436
  47,806,336
  47,806,434
  47,806,551
  47,806,704
  47,808,144
A/G
G/A
A/G
G/A
C
T
A
C
T
C
T
C
G
A
A
T
C
C
T
A
A
G
A
C
G
G
T
G
A
C
G
G
A
A
C
A
T
G
T
G
G
G
C
G
T
G
A
G
C
C
A
G
C
A
A/C
G/A
C/T
G/A
G/A
C/G
A
C/T
C/T
G/A
C/T
G
G
G
T
G
A
C
C
T
G
C
A
G
A
G
A
T
T
C
A
T
G
G
C
T
G