Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 112,202 (bp)   Positions: 149
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
BBDP/Wor (RGD) 
.002
.001
.0
.178
.001
.998
.169
.084
.003
.001
.003
.332
.043
.602
.884
.951
.949
.0
.276
.062
.019
.001
.0
.002
.003
.001
.001
.0
.017
.006
.012
.001
.016
.0
.001
.001
.906
.234
.001
.0
.0
.024
.0
.001
.631
--
--
--
--
--
.258
.004
.131
.044
.007
.016
.0
.025
.012
.019
.001
.071
.921
--
--
--
--
--
.019
.013
.002
.05
.01
.013
.064
.0
.0
.005
.0
.012
.009
.001
.007
.119
.002
.037
.47
.0
.013
.0
.002
.068
.267
.043
.026
--
.002
.02
.004
.01
.049
.012
.008
.588
.021
.004
.026
.031
.001
.002
.001
--
.01
.0
.005
.016
.016
--
--
--
--
.574
--
.023
.0
.958
.008
.288
.002
--
.005
.002
--
.099
--
--
--
--
--
--
--
.007
.002
.018
.0
.975
.008
.008
.0
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
Cox7b2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
G
C
A
T
G
C
A
G
T
T
C
G
T
G
T
A
T
T
A
G
C
A
T
C
A
A
G
C
A
C
A
T
G
T
A
T
A
T
C
G
T
C
A
G
C
T
A
G
G
A
G
C
T
C
C
T
C
C
T
C
T
C
A
A
A
T
A
T
C
C
A
T
C
C
C
C
C
G
G
A
A
C
G
G
A
C
T
G
A
C
A
G
T
C
A
T
C
C
C
A
A
A
T
G
T
A
T
C
C
T
A
G
C
T
T
G
C
C
C
T
G
G
G
T
G
G
C
C
C
G
C
A
A
G
C
G
A
A
C
G
A
G
G
T
A
G
A
A
  39,257,256
  39,257,288
  39,257,734
  39,258,024
  39,258,138
  39,258,444
  39,259,002
  39,259,004
  39,259,997
  39,260,154
  39,261,083
  39,261,437
  39,261,736
  39,262,956
  39,263,021
  39,263,065
  39,263,269
  39,264,059
  39,264,902
  39,265,502
  39,265,590
  39,265,935
  39,266,028
  39,266,860
  39,266,970
  39,267,080
  39,267,102
  39,267,446
  39,268,337
  39,268,354
  39,268,493
  39,268,537
  39,269,205
  39,269,240
  39,269,303
  39,269,990
  39,270,075
  39,270,203
  39,270,787
  39,271,289
  39,271,343
  39,271,403
  39,272,336
  39,272,616
  39,273,255
  39,273,416
  39,273,542
  39,273,600
  39,273,631
  39,273,845
  39,274,025
  39,274,618
  39,274,666
  39,274,682
  39,274,990
  39,275,318
  39,275,429
  39,275,562
  39,275,711
  39,275,729
  39,275,968
  39,276,036
  39,276,293
  39,280,780
  39,280,984
  39,281,002
  39,281,311
  39,281,373
  39,282,103
  39,282,151
  39,282,868
  39,282,889
  39,283,063
  39,283,064
  39,283,211
  39,283,938
  39,283,940
  39,284,030
  39,284,540
  39,286,584
  39,288,040
  39,288,229
  39,291,279
  39,292,255
  39,292,659
  39,292,681
  39,294,678
  39,295,450
  39,295,906
  39,295,947
  39,300,409
  39,300,733
  39,303,224
  39,307,624
  39,307,643
  39,308,435
  39,312,028
  39,315,325
  39,316,324
  39,316,472
  39,316,846
  39,317,076
  39,317,078
  39,317,142
  39,317,196
  39,317,233
  39,317,300
  39,317,551
  39,318,232
  39,318,444
  39,319,337
  39,319,665
  39,320,692
  39,324,416
  39,325,772
  39,326,916
  39,328,922
  39,329,085
  39,331,163
  39,331,164
  39,331,818
  39,332,544
  39,336,091
  39,337,385
  39,338,729
  39,339,594
  39,340,933
  39,342,086
  39,342,546
  39,347,919
  39,349,575
  39,351,612
  39,352,087
  39,352,253
  39,353,529
  39,355,387
  39,356,394
  39,358,279
  39,359,376
  39,359,583
  39,360,185
  39,365,615
  39,366,017
  39,366,460
  39,367,040
  39,367,347
  39,367,363
  39,367,581
  39,368,336
A
A
T
G
C
A
A
T
C
A
C
G
A
C
A
C
G
C
C
G
A
A
G
C
A
G
G
A
T
T
T
G
C
A
A
G
G
C
C
T
A
C
T
G
A
A
C
C
G/A
T
T
A
T
C
A
T
C
T
T
C
T
C
T
G
G
C
C
T
C
A
T
T
G
G
A
T
G
T
A
A
G
C
G
A
A
G
T
C
A
G
T
T
T
C
T
G
A
T
A
A
G
C
G
G
C
G
G
G
T
A
C
T
A
T
C
G
A
A
A
A
C
C
A
A
C
A
T
G
T
G
T
T
T
C
T
T
T
T
T
T
T
T
A
T
C
T
T
T
G