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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 356,834 (bp)   Positions: 287
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
.57
--
--
--
--
--
.007
.0
.011
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.015
.003
.001
.001
.001
.003
.052
.159
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
1.0
1.0
.319
.548
.979
.986
1.0
1.0
1.0
1.0
1.0
.026
.145
.145
.002
.0
.0
.002
.001
.006
.001
.003
.005
.002
.029
.012
.049
.047
.001
.002
.002
.001
.003
.005
.016
.023
.012
.009
.005
.004
.001
.009
.013
.057
.35
.0
.018
.011
.159
.0
.0
.007
.001
.0
.01
.021
.021
.034
.009
.0
.0
.004
.001
.001
.037
.004
.0
.005
.001
.0
.0
.0
.057
.058
.087
.073
.039
.011
.002
.001
.001
.986
.995
.287
.073
.102
.011
.0
.0
.0
.0
.002
.005
.007
.003
.0
.001
.014
.0
.001
.0
.014
.0
.002
.0
.0
.085
.0
.003
.018
.075
.001
.0
.0
.023
.214
.359
.458
.833
.804
.916
.919
.527
.094
.023
.024
.022
.007
.003
.004
.002
.029
.029
.049
.005
.033
.208
.0
.185
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.041
--
--
--
.03
.005
.008
.001
--
--
--
--
.295
.002
.015
.003
.001
.004
.056
.07
.017
.011
.001
.003
.03
.002
.0
.004
.003
.006
.016
.017
.006
.001
.001
.001
.013
.013
.0
.004
.009
.001
.0
.001
.0
.0
.34
.929
.473
.997
.997
1.0
1.0
1.0
.997
1.0
1.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
Col19a1
G
C
C
G
T
C
G
5
-
-
G
A
G
G
G
G
-
3
2
C
A
-
A
T
-
-
-
-
C
C
-
2
2
G
G
14
T
6
T
-
-
2
G
-
G
A
T
C
A
C
T
8
G
T
G
C
A
A
A
A
A
A
C
A
T
C
T
T
G
C
-
-
-
C
-
A
2
-
T
-
A
C
-
A
C
-
G
-
-
-
2
-
G
T
-
C
-
A
G
T
A
T
G
-
-
C
-
T
C
G
C
-
-
T
-
-
T
-
G
C
T
T
T
G
C
A
-
-
T
G
A
C
C
C
A
2
T
A
A
C
T
2
T
-
-
-
-
A
-
G
G
G
G
G
A
2
-
T
G
C
T
2
-
2
-
2
-
-
-
-
-
-
T
-
C
-
G
-
-
A
-
-
2
-
A
-
2
-
-
-
-
A
-
-
C
-
G
T
C
T
G
A
-
A
-
-
C
C
-
-
C
C
G
G
T
-
C
-
C
2
-
T
-
G
T
A
T
-
-
C
-
8
C
G
G
T
G
T
-
-
-
G
-
-
-
-
G
C
-
-
G
-
T
T
2
4
T
A
A
C
G
T
G
-
-
G
G
5
-
T
T
A
2
-
G
A
C
A
2
A
C
T
-
2
2
C
-
  30,529,316
  30,580,605
  30,580,613
  30,581,655
  30,582,288
  30,582,798
  30,587,940
  30,590,381
  30,592,145
  30,599,292
  30,599,301
  30,599,499
  30,599,513
  30,599,541
  30,599,543
  30,599,549
  30,599,558
  30,599,573
  30,599,609
  30,599,701
  30,599,716
  30,599,729
  30,599,741
  30,599,745
  30,599,755
  30,599,760
  30,599,764
  30,599,770
  30,599,773
  30,599,774
  30,599,779
  30,599,783
  30,599,786
  30,599,788
  30,599,792
  30,599,795
  30,599,811
  30,599,818
  30,599,827
  30,599,829
  30,599,832
  30,599,834
  30,599,845
  30,599,863
  30,639,588
  30,654,351
  30,654,353
  30,654,354
  30,654,355
  30,654,383
  30,658,817
  30,677,591
  30,685,820
  30,685,829
  30,685,844
  30,685,856
  30,685,963
  30,685,966
  30,685,970
  30,685,971
  30,685,976
  30,685,983
  30,685,984
  30,685,993
  30,687,749
  30,687,854
  30,688,039
  30,688,171
  30,688,404
  30,718,383
  30,718,392
  30,718,405
  30,718,564
  30,718,614
  30,718,637
  30,718,651
  30,718,656
  30,718,661
  30,718,664
  30,718,667
  30,737,291
  30,737,296
  30,737,308
  30,737,325
  30,737,331
  30,737,339
  30,737,342
  30,737,349
  30,737,354
  30,737,356
  30,737,359
  30,737,370
  30,737,374
  30,737,383
  30,737,390
  30,737,410
  30,737,420
  30,737,435
  30,737,445
  30,737,448
  30,737,452
  30,737,458
  30,737,460
  30,737,464
  30,737,470
  30,737,476
  30,737,480
  30,737,484
  30,737,485
  30,737,487
  30,737,495
  30,737,505
  30,737,507
  30,737,518
  30,743,238
  30,749,368
  30,749,373
  30,749,389
  30,752,445
  30,752,494
  30,771,940
  30,771,993
  30,772,031
  30,772,062
  30,772,070
  30,772,071
  30,772,080
  30,772,130
  30,772,143
  30,772,144
  30,772,159
  30,772,166
  30,772,174
  30,772,184
  30,772,202
  30,772,206
  30,772,238
  30,772,252
  30,772,256
  30,772,274
  30,772,276
  30,772,285
  30,772,296
  30,772,302
  30,772,309
  30,772,318
  30,772,320
  30,772,323
  30,772,325
  30,775,656
  30,775,733
  30,775,826
  30,775,841
  30,775,844
  30,775,866
  30,777,502
  30,777,505
  30,777,512
  30,777,513
  30,777,520
  30,777,524
  30,777,531
  30,777,543
  30,777,544
  30,777,576
  30,777,578
  30,777,589
  30,777,595
  30,777,622
  30,777,649
  30,777,824
  30,777,872
  30,777,883
  30,777,965
  30,778,102
  30,778,108
  30,778,141
  30,778,281
  30,778,334
  30,778,347
  30,778,428
  30,778,432
  30,778,464
  30,778,476
  30,778,482
  30,778,485
  30,778,487
  30,778,497
  30,778,502
  30,778,510
  30,778,518
  30,778,530
  30,778,553
  30,778,588
  30,778,593
  30,778,598
  30,778,606
  30,778,617
  30,778,618
  30,778,627
  30,778,641
  30,778,643
  30,778,664
  30,779,901
  30,780,432
  30,801,732
  30,803,071
  30,803,113
  30,804,335
  30,804,342
  30,804,364
  30,804,379
  30,804,385
  30,804,395
  30,804,402
  30,804,427
  30,804,450
  30,804,456
  30,804,630
  30,804,632
  30,804,635
  30,804,638
  30,804,642
  30,804,644
  30,804,646
  30,810,191
  30,810,234
  30,810,240
  30,810,326
  30,810,399
  30,810,443
  30,822,729
  30,822,746
  30,822,750
  30,834,404
  30,834,416
  30,834,429
  30,838,880
  30,850,489
  30,850,495
  30,850,730
  30,850,858
  30,852,676
  30,854,337
  30,854,347
  30,854,357
  30,854,364
  30,854,391
  30,854,394
  30,854,400
  30,854,406
  30,854,414
  30,854,421
  30,854,559
  30,854,567
  30,854,619
  30,854,639
  30,854,644
  30,854,661
  30,854,666
  30,854,692
  30,854,693
  30,857,386
  30,857,405
  30,857,425
  30,857,433
  30,857,448
  30,857,453
  30,857,524
  30,857,546
  30,857,551
  30,857,563
  30,857,567
  30,857,581
  30,857,585
  30,857,588
  30,857,630
  30,857,644
  30,857,656
  30,857,673
  30,857,687
  30,857,692
  30,857,726
  30,857,730
  30,857,740
  30,857,747
  30,857,770
G/A
C/G
C/T
G/T
T/C
C/T
-
-
5
A
-
-
-
-
-
-
A
-
-
-
-
2
C
-
T
G
A
A
-
A
A
-
-
A
-
-
G
-
G
A
A
-
-
A
-
G
C
T
G
T
C
-
G/A
T/C
G/C
C/T
A/G
A/G
A/G
A/G
A/G
A/G
C/A
A/G
T/C
A
T/G
T/C
G/T
-
G
T
A
-
G
-
-
T
-
T
-
-
G
-
-
3
-
T
A
A
-
3
T
-
G
-
A
-
-
C
C/C
C
T
T
T
A
A
G
T
T
A
A
A
-
G
G
-
T
A
-
T/-
G
G
T
T
C
T
A
G
T
-
T
-
-
-
-
-
-
-
T
C
-
-
T
C
C
C
C
2
-
-
-
-
-
-
-
3
G
T
T
-
-
C
-
6
-
T
2
A
2
G
T
-
A
-
T
-
A
2
-
C
A
-
3
-
G
-
T
A
T
T
-
2
T
T
T
A
G
T
G
T
-
A
G
13
4
-
-
A
G
-
-
-
-
-
C/A
G
A
G
-
3
-
T
-
-
-
-
C
A
-
T
-
G
A
-
-
-
A
G
A
A
-
A
A
A
T
-
-
9
T
A
C
-
-
-
-
-
-
-
-
T
G
-
C
T
T
-
-
C
-
-
-
-
C
C
-
-
-
-
-
T
-
T
-
-
-
2