Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 71,829 (bp)   Positions: 156
Conservation 
Genes ( + ) 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SBN/Ygl (RGD) 
.001
.016
.116
.006
.002
.076
1.0
.031
.003
.555
.042
.018
.007
.0
.001
.374
.771
.0
.001
.026
.02
.159
.031
.025
.004
.005
.278
--
.017
.02
.012
.045
.006
.392
.006
.099
.492
.005
.196
.002
.404
.243
.0
.001
.554
1.0
.001
.0
.0
.002
.2
.0
.0
.012
.0
.001
.0
.003
.013
.0
.003
.062
.0
.003
.209
.175
.0
.027
.001
.0
.0
.001
.25
.255
.001
.005
.042
--
--
.092
.001
.012
.08
.008
.002
.003
.116
.04
--
--
.308
.305
.533
.037
.169
.002
.009
.0
.698
.701
.107
--
.981
.017
.02
.004
.001
.001
.004
.0
.002
.001
.003
.0
.003
.0
.028
.044
.003
.0
.229
.0
.001
.569
.412
.006
.0
.68
.012
.062
.0
.0
.001
.0
.022
.337
.001
.002
.002
.052
--
.0
.0
.002
.025
.677
.002
.009
.001
.986
.001
.001
.0
.004
.016
1.0
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
Clcn3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Cbx3l1
--
--
--
--
--
--
--
--
--
G
G
A
A
C
C
C
G
G
G
G
A
G
C
A
G
A
A
G
T
C
A
T
T
G
A
T
G
C
G
C
G
A
A
C
G
A
C
A
A
T
C
C
C
A
A
A
C
T
G
T
G
C
A
G
C
G
C
G
C
A
A
C
G
A
A
T
T
A
A
A
C
A
A
G
G
A
A
T
G
G
G
G
G
C
T
G
C
C
C
T
C
A
A
A
C
G
C
C
G
G
G
G
A
G
G
T
A
T
T
T
T
A
G
T
T
C
G
G
C
T
G
C
G
G
G
G
C
G
C
G
A
A
A
T
A
T
A
T
G
T
T
C
A
T
T
A
C
G
A
T
G
C
G
G
A
  32,448,964
  32,449,609
  32,449,815
  32,449,972
  32,450,217
  32,450,340
  32,450,495
  32,450,682
  32,451,460
  32,451,645
  32,452,095
  32,456,038
  32,456,092
  32,457,077
  32,457,198
  32,457,436
  32,458,850
  32,460,470
  32,460,732
  32,460,779
  32,461,840
  32,462,955
  32,463,147
  32,464,480
  32,464,518
  32,464,531
  32,464,824
  32,464,926
  32,465,152
  32,465,802
  32,465,996
  32,466,369
  32,466,777
  32,467,010
  32,467,923
  32,468,059
  32,468,159
  32,469,034
  32,471,086
  32,472,657
  32,474,867
  32,474,872
  32,475,191
  32,475,386
  32,475,632
  32,475,665
  32,478,581
  32,478,668
  32,478,681
  32,478,699
  32,478,899
  32,479,453
  32,479,482
  32,479,754
  32,479,903
  32,480,241
  32,480,497
  32,480,615
  32,481,008
  32,482,217
  32,482,905
  32,483,029
  32,483,279
  32,483,895
  32,483,984
  32,484,471
  32,485,098
  32,486,023
  32,486,197
  32,486,203
  32,486,207
  32,486,424
  32,486,490
  32,486,607
  32,486,775
  32,486,779
  32,486,939
  32,486,985
  32,486,989
  32,487,288
  32,487,580
  32,487,812
  32,488,142
  32,488,148
  32,488,313
  32,488,315
  32,488,466
  32,488,734
  32,488,921
  32,488,946
  32,489,333
  32,489,334
  32,489,382
  32,489,440
  32,489,573
  32,489,597
  32,489,797
  32,489,821
  32,491,253
  32,491,271
  32,491,776
  32,492,371
  32,492,642
  32,492,932
  32,494,148
  32,494,723
  32,494,755
  32,494,782
  32,495,807
  32,495,814
  32,495,851
  32,495,984
  32,496,187
  32,496,234
  32,496,583
  32,496,841
  32,497,048
  32,497,058
  32,497,199
  32,497,770
  32,498,080
  32,498,684
  32,499,754
  32,499,789
  32,500,123
  32,500,881
  32,501,269
  32,501,566
  32,501,981
  32,503,515
  32,504,031
  32,504,093
  32,504,314
  32,504,654
  32,504,705
  32,504,721
  32,505,316
  32,505,698
  32,505,721
  32,506,156
  32,506,669
  32,507,097
  32,507,591
  32,507,742
  32,507,752
  32,508,272
  32,510,311
  32,511,622
  32,512,174
  32,517,236
  32,518,229
  32,519,441
  32,519,511
  32,520,152
  32,520,253
  32,520,574
C
C
G
G
T
A
G
A
C
T
A
G
A
G
G
A
G
G
A
A
A
T
C
A
A
G
C
A
T
A
T
A
C
T
T
A
C
T
T
C
A
T
T
T
T
T
C
T
C
A
T/G
A
T
G
A
T
T
A
A
T
G
G
T
A
G
G
C
G
G
G
G
A
G
G
T
A
C
T
A
A
A
A
A
T
T
A
A
G
A
G
G
T
T
G
T
T
A
A
T
C
A
C
T
G
C
C
A
C
C
C
C
A
C
A
G
A
T
A
A
T
C
T
T
A
A
A
C
T
A
G
A
G
G
T
C
T
A
G
C
A
C
A
T
G
A
C
T
A
A
G
C
T
T
A
T
G