Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 52,223 (bp)   Positions: 78
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
PVG/Seac (2019) 
.19
.0
.0
.005
.022
.011
.408
.19
.02
.001
.018
.004
.103
.127
.02
.987
1.0
.996
.998
.999
1.0
.998
1.0
--
.294
.0
.005
.118
.001
.026
.89
.865
.838
.856
.018
.04
.081
--
.001
.026
.003
.024
.033
.688
.0
.0
.338
.125
.092
.063
.086
.154
.171
.202
.208
.017
.001
.001
.002
.0
.058
.0
.128
.003
.004
.005
.004
.03
.025
.024
.026
.025
.057
.06
.061
.915
.001
.002
Casp7
Casp7
Casp7
Casp7
Casp7
Casp7
Casp7
Casp7
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
-
T
T
A
A
A
T
-
-
A
C
C
G
T
G
T
2
G
T
C
C
G
C
A
A
T
C
T
A
A
T
T
T
A
C
-
G
T
A
T
A
A
G
T
C
A
T
C
C
A
G
A
T
T
G
27
2
G
A
2
A
C
G
A
A
-
T
-
-
T
-
G
T
G
G
G
T
G
  277,190,807
  277,191,744
  277,208,445
  277,209,408
  277,209,477
  277,211,498
  277,212,082
  277,212,227
  277,212,242
  277,212,668
  277,213,012
  277,213,649
  277,213,775
  277,213,825
  277,214,653
  277,215,604
  277,215,614
  277,215,621
  277,215,624
  277,215,636
  277,215,796
  277,216,091
  277,216,099
  277,217,533
  277,220,452
  277,221,709
  277,221,715
  277,221,906
  277,222,962
  277,223,570
  277,223,673
  277,223,675
  277,223,677
  277,224,690
  277,225,690
  277,226,517
  277,226,902
  277,228,299
  277,229,316
  277,229,839
  277,230,122
  277,230,676
  277,232,489
  277,233,903
  277,233,975
  277,234,034
  277,235,921
  277,235,961
  277,235,965
  277,235,969
  277,235,974
  277,235,984
  277,235,989
  277,236,004
  277,236,012
  277,236,288
  277,238,103
  277,238,109
  277,238,110
  277,238,112
  277,238,223
  277,238,807
  277,239,527
  277,239,891
  277,240,748
  277,241,154
  277,241,162
  277,241,176
  277,241,177
  277,241,183
  277,241,189
  277,241,190
  277,241,198
  277,241,200
  277,241,205
  277,241,215
  277,242,012
  277,242,223
T
C
C
G
G
C
A
G
-/2
G
T
T
A
G
A
C
2/-
G/A
C
C/T
G
G/C
C/G
G
C
C
T
G
G
G
A
A
A
G
G
4
A
A
G
C
C
G
A
C
T
G
T/C
C/T
C/T
A/T
G/C
A/C
T/G
T/C
G/T
-
-
T
G
-
G
T
A
T
G
C
C
3
2
C
5
C
C/CC
C
C
-
C
C