Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 231,301 (bp)   Positions: 597
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
.168
.044
.999
.966
.005
.004
.0
.02
.003
.101
.0
.903
.993
.002
.148
.008
.0
.015
.024
.019
.0
.002
.005
.006
.002
.0
.366
.024
.0
.002
.0
.0
.0
.003
.001
.001
.003
.009
.023
.954
.996
.0
.0
.002
.909
.002
.0
.001
.002
.005
.004
.008
.001
--
--
.095
.065
.002
.006
.0
.016
.0
.006
.001
.001
.007
.0
.001
.001
.003
.016
.093
.001
.0
.006
.002
.246
.0
.002
.009
.001
.005
.014
.117
--
.006
.539
.399
.007
.002
.032
.033
.146
.241
.171
.021
.03
.018
.034
.006
.0
.0
.001
.001
.001
.001
.0
.001
.004
.003
.003
.001
.001
.001
.002
.001
.001
.004
.0
.032
.0
.043
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.1
.001
.027
.002
.0
.001
.016
.375
.003
.001
.139
.976
.004
--
.006
.063
.028
.089
.0
.0
.007
.001
.001
.0
.007
.001
.0
.0
.001
.003
.02
.247
.0
.012
.0
.001
.0
.0
.0
.0
.007
.0
.001
.001
.0
.0
.0
.0
.001
.002
.001
.001
.005
.0
.0
.028
.049
.01
.023
.002
--
.344
.001
.0
.0
.0
.0
.0
.0
.001
.131
.149
.003
.043
.0
.0
.098
.018
.001
.001
.002
.001
.002
.017
.008
.02
.0
.003
.038
.097
.002
.032
.044
.018
.026
.0
.037
.004
.017
.003
.0
.008
.006
.004
.0
.079
.001
.009
.014
--
--
--
--
--
.029
.004
.642
.069
.003
.003
.1
.805
.0
.004
--
.008
.017
.002
.001
.003
.005
.001
.0
.0
.003
.001
.057
.0
.009
.387
.004
.23
.0
.004
.014
.001
.002
.006
.005
.001
.002
.011
.0
.001
.07
.026
.003
.078
.205
.079
.006
.002
.0
.0
.109
.125
.001
.007
.175
.003
.008
.245
.018
.109
.01
.002
.035
.021
.012
.014
.19
.42
.01
.082
.007
.78
.032
.034
.011
.0
.001
.037
.086
.0
.0
.016
.001
.028
.001
.003
--
--
--
--
--
--
--
.0
.0
.002
.035
.001
.002
.0
.0
.012
.002
.776
.001
.011
.01
1.0
.006
.0
.002
.005
.001
.002
.007
.022
.0
.0
.027
.01
.007
.003
.001
.0
.0
.001
.001
.0
.008
.0
.0
.507
.05
.001
.019
.004
.112
--
--
.22
.001
.058
.0
.0
.016
.052
.009
.193
.0
.023
.087
.0
.143
.04
.011
.003
.019
.002
.016
.025
.01
--
--
--
--
--
--
--
--
.84
.061
.0
.005
.004
--
--
--
--
--
--
--
--
--
--
.005
.01
.017
.091
.002
--
--
.012
.0
.009
.012
.104
.359
.007
.001
.005
.0
.0
.0
.254
.002
.013
.001
.0
.0
.016
.0
.004
.019
.091
--
--
.001
.203
.55
.17
--
.007
.008
.055
.001
.003
.008
.0
.065
.04
.0
.001
.0
.011
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.001
.333
.0
.005
.0
.001
.0
.033
.0
.003
.0
.992
.002
.001
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
Camk2d
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
C
T
T
C
G
-
T
T
C
T
-
C
3
T
C
C
-
T
4
C
C
-
C
T
T
T
T
C
C
A
A
A
G
T
G
A
A
G
C
A
T
G
T
C
G
A
-
T
T
C
C
2
T
C
A
C
G
T
G
C
C
A
G
T
5
A
A
G
G
-
A
G
C
T
A
-
T
A
T
C
C
A
T
G
G
-
A
A
-
T
C
-
-
-
-
-
C
A
C
C
C
C
T
C
C
C
C
-
-
-
5
C
C
C
-
C
T
C
A
C
-
G
-
-
A
C
2
C
T
T
A
G
-
G
-
-
C
G
G
-
G
2
2
C
A
T
T
C
T
G
A
T
T
C
G
T
2
G
A
T
G
G
G
C
3
G
G
T
C
G
2
C
A
T
G
-
2
A
T
2
C
A
C
G
2
G
G
-
A
C
T
T
C
2
G
A
T
T
4
C
-
2
A
C
C
-
C
T
-
A
C
T
G
T
G
G
T
A
G
T
G
A
A
T
C
-
T
39
A
A
C
C
A
C
A
T
T
T
A
C
T
G
G
T
C
G
C
T
T
T
-
T
G
C
C
G
A
C
A
A
C
A
T
T
A
A
5
C
A
G
C
T
T
T
G
6
A
C
C
C
C
C
C
G
A
T
A
T
C
G
A
A
A
T
T
T
C
T
T
C
T
C
T
A
G
G
C
T
A
T
T
A
A
G
C
A
C
T
C
A
A
T
-
C
T
T
T
C
A
G
C
-
G
C
C
G
A
T
G
T
4
G
A
A
C
G
T
C
6
A
G
G
T
G
C
G
A
A
-
T
-
C
A
T
G
G
G
G
A
T
A
25
C
-
-
C
C
-
5
A
T
A
108
A
A
C
T
T
A
C
-
A
A
G
G
G
C
C
2
G
C
G
C
G
C
G
G
C
T
C
A
G
-
T
A
A
G
G
T
C
A
G
G
T
G
T
C
A
T
A
G
A
G
G
C
C
C
G
3
G
C
T
G
T
-
C
A
A
T
G
G
G
T
A
T
T
A
G
G
C
C
T
A
A
T
T
C
T
G
G
G
8
A
C
T
A
A
T
4
G
C
G
C
A
G
A
G
C
G
A
C
C
C
G
G
A
G
A
T
A
C
C
T
4
C
C
C
-
C
T
-
16
T
G
T
T
C
A
C
G
C
A
T
G
G
G
G
C
C
T
T
-
G
A
A
A
G
A
-
A
C
2
-
3
4
T
A
5
C
A
T
A
C
T
T
T
T
T
A
C
C
T
-
G
G
C
T
T
C
G
C
T
C
T
G
A
T
G
C
-
-
G
G
A
T
T
T
A
-
C
G
-
G
A
T
A
  230,901,432
  230,901,433
  230,901,744
  230,901,864
  230,902,010
  230,902,015
  230,902,173
  230,902,224
  230,902,645
  230,903,128
  230,903,285
  230,903,389
  230,903,683
  230,903,712
  230,903,903
  230,903,967
  230,904,216
  230,904,273
  230,904,408
  230,904,500
  230,904,855
  230,904,860
  230,904,865
  230,904,879
  230,904,980
  230,905,133
  230,905,155
  230,905,167
  230,905,303
  230,905,319
  230,905,384
  230,905,498
  230,905,805
  230,905,902
  230,906,252
  230,906,253
  230,906,407
  230,906,410
  230,906,615
  230,906,916
  230,906,927
  230,907,016
  230,907,248
  230,907,270
  230,907,341
  230,907,385
  230,907,449
  230,907,708
  230,907,929
  230,908,111
  230,908,113
  230,908,132
  230,908,280
  230,908,498
  230,908,730
  230,908,790
  230,908,852
  230,908,954
  230,908,966
  230,908,972
  230,909,056
  230,909,390
  230,909,443
  230,910,003
  230,910,077
  230,910,229
  230,910,647
  230,910,753
  230,911,104
  230,911,118
  230,911,280
  230,911,398
  230,911,945
  230,912,020
  230,912,253
  230,912,337
  230,912,536
  230,912,988
  230,912,996
  230,913,082
  230,913,460
  230,913,582
  230,914,007
  230,914,189
  230,915,276
  230,916,105
  230,916,155
  230,916,316
  230,917,475
  230,917,481
  230,917,488
  230,917,489
  230,917,493
  230,917,500
  230,917,508
  230,917,510
  230,917,528
  230,917,545
  230,917,611
  230,918,266
  230,919,448
  230,919,459
  230,919,485
  230,919,491
  230,919,502
  230,919,504
  230,919,508
  230,919,523
  230,919,529
  230,919,544
  230,919,545
  230,919,548
  230,919,590
  230,919,591
  230,919,617
  230,919,624
  230,919,627
  230,919,629
  230,919,645
  230,920,486
  230,922,390
  230,924,916
  230,924,974
  230,924,993
  230,925,000
  230,925,006
  230,925,024
  230,925,049
  230,925,053
  230,925,055
  230,925,057
  230,925,064
  230,925,071
  230,925,074
  230,925,077
  230,925,143
  230,925,148
  230,925,175
  230,925,183
  230,925,187
  230,925,193
  230,925,201
  230,925,208
  230,925,215
  230,925,220
  230,925,226
  230,925,252
  230,925,256
  230,925,259
  230,925,261
  230,925,291
  230,925,294
  230,925,299
  230,925,323
  230,925,329
  230,925,336
  230,925,343
  230,925,351
  230,925,363
  230,925,376
  230,925,377
  230,925,398
  230,925,406
  230,925,421
  230,925,433
  230,925,444
  230,925,458
  230,925,479
  230,925,487
  230,925,492
  230,925,496
  230,925,500
  230,925,504
  230,925,515
  230,925,525
  230,925,565
  230,925,572
  230,925,581
  230,925,586
  230,925,598
  230,925,609
  230,925,615
  230,925,619
  230,925,644
  230,925,655
  230,925,671
  230,925,690
  230,925,699
  230,925,704
  230,925,712
  230,925,732
  230,925,737
  230,925,749
  230,925,760
  230,925,773
  230,925,793
  230,925,799
  230,925,803
  230,925,816
  230,925,825
  230,925,836
  230,925,840
  230,925,849
  230,925,862
  230,925,876
  230,925,919
  230,925,935
  230,925,963
  230,925,971
  230,926,035
  230,926,042
  230,926,122
  230,926,161
  230,926,230
  230,926,249
  230,926,619
  230,931,109
  230,932,275
  230,934,129
  230,934,416
  230,934,576
  230,935,025
  230,935,683
  230,936,024
  230,936,428
  230,937,853
  230,941,166
  230,941,478
  230,942,679
  230,944,319
  230,944,452
  230,944,581
  230,946,586
  230,946,775
  230,947,482
  230,948,516
  230,950,864
  230,951,151
  230,951,839
  230,952,387
  230,953,171
  230,953,758
  230,953,759
  230,954,552
  230,954,894
  230,955,076
  230,955,629
  230,955,777
  230,955,830
  230,956,302
  230,956,420
  230,956,715
  230,956,879
  230,957,106
  230,957,211
  230,957,249
  230,957,979
  230,958,217
  230,958,663
  230,959,262
  230,959,352
  230,959,366
  230,959,431
  230,961,754
  230,962,165
  230,962,190
  230,965,192
  230,965,382
  230,966,048
  230,966,302
  230,967,384
  230,969,657
  230,974,982
  230,974,991
  230,975,141
  230,975,482
  230,978,787
  230,979,489
  230,980,511
  230,980,513
  230,980,515
  230,980,517
  230,980,519
  230,980,533
  230,982,886
  230,982,900
  230,982,915
  230,983,123
  230,983,348
  230,983,708
  230,983,818
  230,984,008
  230,984,170
  230,984,215
  230,984,217
  230,984,224
  230,984,338
  230,984,365
  230,984,430
  230,984,991
  230,985,395
  230,985,757
  230,985,893
  230,986,481
  230,986,489
  230,986,592
  230,986,677
  230,986,709
  230,987,124
  230,987,299
  230,989,231
  230,989,374
  230,989,589
  230,990,676
  230,990,794
  230,990,801
  230,991,877
  230,992,433
  230,992,519
  230,992,610
  230,992,620
  230,992,717
  230,992,725
  230,992,959
  230,993,069
  230,994,001
  230,994,014
  230,994,177
  230,994,271
  230,994,489
  230,994,942
  230,995,290
  230,995,463
  230,996,252
  230,997,012
  230,997,652
  230,997,751
  230,998,224
  230,998,229
  230,998,755
  231,001,430
  231,002,467
  231,002,661
  231,003,376
  231,003,538
  231,004,651
  231,005,101
  231,005,328
  231,005,762
  231,006,232
  231,006,325
  231,006,623
  231,007,528
  231,007,603
  231,008,125
  231,008,361
  231,008,423
  231,008,528
  231,008,904
  231,008,961
  231,008,996
  231,009,091
  231,009,299
  231,009,338
  231,009,593
  231,009,699
  231,010,071
  231,010,349
  231,010,513
  231,010,558
  231,010,861
  231,010,874
  231,013,486
  231,013,907
  231,014,664
  231,015,212
  231,015,325
  231,015,526
  231,015,538
  231,015,558
  231,015,580
  231,015,970
  231,016,055
  231,016,746
  231,016,930
  231,017,392
  231,017,631
  231,017,939
  231,017,968
  231,018,160
  231,018,528
  231,018,657
  231,019,328
  231,019,762
  231,019,847
  231,019,892
  231,019,925
  231,020,037
  231,020,192
  231,020,737
  231,022,122
  231,022,176
  231,023,136
  231,023,172
  231,024,128
  231,024,290
  231,024,393
  231,024,941
  231,025,067
  231,025,199
  231,026,194
  231,026,202
  231,026,673
  231,026,763
  231,026,778
  231,026,818
  231,027,032
  231,027,174
  231,027,592
  231,027,912
  231,028,081
  231,028,318
  231,028,551
  231,028,911
  231,029,076
  231,029,925
  231,030,026
  231,030,089
  231,030,639
  231,030,936
  231,031,323
  231,031,338
  231,031,643
  231,031,806
  231,031,894
  231,031,895
  231,033,377
  231,033,727
  231,034,814
  231,034,962
  231,036,101
  231,036,548
  231,037,122
  231,039,047
  231,039,327
  231,039,556
  231,040,456
  231,040,526
  231,040,703
  231,043,837
  231,044,844
  231,044,854
  231,044,957
  231,046,120
  231,047,262
  231,047,347
  231,047,989
  231,048,311
  231,049,003
  231,049,273
  231,049,433
  231,050,658
  231,051,418
  231,052,074
  231,052,097
  231,053,710
  231,054,590
  231,054,756
  231,055,031
  231,055,360
  231,055,449
  231,057,095
  231,059,734
  231,065,341
  231,065,368
  231,065,392
  231,065,765
  231,070,581
  231,072,246
  231,074,344
  231,075,242
  231,078,880
  231,080,428
  231,080,817
  231,083,654
  231,084,419
  231,084,687
  231,085,085
  231,087,045
  231,087,675
  231,088,507
  231,088,590
  231,090,456
  231,090,472
  231,090,535
  231,090,801
  231,090,847
  231,090,929
  231,091,077
  231,091,158
  231,097,458
  231,097,555
  231,097,727
  231,099,893
  231,099,901
  231,100,188
  231,100,190
  231,100,199
  231,100,203
  231,100,211
  231,100,214
  231,100,227
  231,100,283
  231,100,480
  231,100,534
  231,100,672
  231,100,961
  231,101,173
  231,101,287
  231,101,306
  231,101,652
  231,101,994
  231,102,000
  231,102,197
  231,103,592
  231,103,606
  231,103,725
  231,105,320
  231,105,413
  231,105,447
  231,105,461
  231,105,472
  231,105,726
  231,105,759
  231,106,008
  231,106,501
  231,106,652
  231,107,072
  231,107,239
  231,107,446
  231,107,459
  231,107,972
  231,108,881
  231,109,016
  231,109,098
  231,109,109
  231,109,258
  231,109,427
  231,109,455
  231,110,538
  231,110,820
  231,111,398
  231,112,182
  231,112,404
  231,113,130
  231,113,199
  231,113,209
  231,113,736
  231,113,978
  231,114,544
  231,114,624
  231,114,805
  231,114,932
  231,115,198
  231,115,459
  231,115,613
  231,115,692
  231,115,806
  231,115,856
  231,118,406
  231,118,478
  231,118,484
  231,118,488
  231,118,521
  231,118,750
  231,119,011
  231,119,012
  231,119,026
  231,119,030
  231,119,544
  231,119,629
  231,119,756
  231,120,031
  231,122,113
  231,122,691
  231,123,910
  231,124,163
  231,125,059
  231,125,613
  231,126,166
  231,126,276
  231,129,714
  231,129,836
  231,130,467
  231,131,997
  231,132,044
  231,132,130
T
T
C
C
G
T
T
C
G
T
C
G
T
-
C
G
T
T
-
-
A/A
A/A
A
A
C
G
C
C
A
T
G
C
G
A
C
T
A/C
T
C
A
G
G
A
G
T
C
G
A
A
G
T
A
-
C
T
G
T
A
C
A
T
G
C
A
C
-
G
G
A
A
C
G
A
G
C
G
T
C
G
C
A
-
G
A
T
-
A
-
-
A
C
T
T
T
T
C
2
T
T
T
G
T
T
C
A
A
A
A
2
A
3
-
G
A
G
G
A
C
A
T
A
C
-
C
T
-
-
-
A
-
-
-
-
A
-
T
A
-
T
-
G
A
-
-
-
-
-
-
T
C
A
G
-
-
-
-
-
-
-
C
A
-
-
A
-
-
-
-
-
T
-
-
-
-
-
-
2
-
T
-
-
A
T/C
-
-
-
-
-
T
-
-
G
-
-
-
-
-
-
-
-
-
T
-
-
-
-
A
-
-
A
G
-
-
A
-
C
T
C
T
T
C
T
C
G
A
T
A
G
-
G
T
T
T
G
T
T
C
C
C
C
T
C
A
A
-
T
T
A
C
C
C
3
A
C
T
T
A
G
T
G
C
T
G
C
-
G
G
-
G
G
T
T
G
C
A
A
-
G
A
A
A
A
A
A
A
G
G
-
G
A
A
G
G
G
C
C
-
T
C
G
T
C
T
A
G
A
A
T
A
G
C
G
T
G
C
T
G
T
A
G/T
G
G
C
T
T
A
A
C
T
C
A
T
T
A
T
T
A
G
C
A
G
-
A
G
G
T
A
C
T
-
G
A
A
A
A
A
A
C
T
12
G
2
T
G
C
A
A
A
A
-
C
G
-
T
6
12
A
T
21
-
G
G
G
-
T
G
T
A
G
G
G
T
G
G
A
-
-
T
G
-
A
-
T
T
A
A
T
A
T
C
A
G
A
T
C
G
T
G/C
G/C
G
T
G
A
T
G
A
C
T
G
C
G
A
C
A
A
T
-
-
T
-
A
T
C
A
C
6
T
C
G
-
A
T
T
C
G
G
-
G
A
A
T
T
C
-
G
A
A
G
C
T
C
C
-
T
A
C
T
G
C
-
A
T
A
T
C
A
G
A
-
A
A/G
C/T
C/T
A
G/T
G/A
T/G
A
G
C
G
G
T
A
-
T
T
T
2
T
C
T
-
-
A
G
G
T
G
T
T
G
G
C
A
C
G/T
C
T
G
C
G
T
T
-
G
G
T
C
2
G
T
-
2
-
-
C
T
-
T
C
G
G
T
A
C
A
-
C
C
G
T
G
G
A
A
T
C
A
T
A
T
C
T
C
A
G
A
A
T
T
4
T
C
G
C
G
C
G
G
-
A
A
A
G
C
G