Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 341,686 (bp)   Positions: 570
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
.397
.0
.902
.006
.882
.572
.0
.627
.002
.002
.019
.031
.046
.037
.97
1.0
.023
.001
.999
.723
.052
.0
.0
.001
.0
.0
.001
.002
.006
.009
.001
.0
.008
.0
.0
.001
.001
.002
.002
.0
.001
.001
.001
.005
.012
.002
.0
.003
.001
.001
.002
.003
.0
.004
.001
.008
.012
.015
.014
.002
.001
.001
.003
.002
.926
.0
.0
.001
.0
.0
.0
.001
.0
.0
.001
.004
.002
.0
.061
.002
.0
.991
.0
.001
.133
.003
.514
.021
.01
.421
.033
.666
.04
.032
.0
.03
.0
.0
.692
.0
.002
.0
.0
.029
.0
.788
.995
.004
.005
.0
.003
.016
.008
1.0
.655
.0
.984
.981
.002
--
--
.045
.07
.996
.002
.16
.0
.158
.001
.0
.966
.005
.035
.267
.001
.985
.998
.074
.008
.017
.039
.0
.992
1.0
1.0
.095
.007
.0
.0
.002
.0
.0
.002
.012
.811
.004
.004
.0
.007
.0
.001
.004
.318
.84
1.0
.0
.896
.97
.529
.001
.0
.0
.17
1.0
.98
.846
.17
.001
.024
.0
.0
.016
.001
.012
.123
.014
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.002
.009
.008
.053
.019
.001
.003
.006
.007
.014
.002
.192
.048
.031
.007
.006
.019
.011
.017
.063
.117
.094
.04
.041
.027
.084
.039
.004
.025
.0
.017
.0
.0
.181
.18
.102
.012
.312
.0
.009
.01
.004
.01
.001
.012
.008
.013
.005
.036
.0
1.0
--
--
--
.994
.382
.247
.041
.003
.0
.007
.019
.008
.006
.051
.005
.058
.002
.957
.002
.002
.0
.013
.0
.001
.238
.004
.0
.0
.0
.001
.0
.001
.001
.001
.0
.001
.054
.994
.0
.99
.0
.118
.041
.007
.0
.002
.06
.002
.001
.002
.0
.172
.008
.996
.061
.009
.009
1.0
1.0
.046
.024
.001
.002
.0
.001
.0
.03
.002
.008
.0
.001
.701
.0
.0
.002
.222
.968
.002
.002
.746
.0
.002
.006
.002
.004
.424
.0
.0
.002
.223
.021
.001
.005
.003
.005
.003
.001
.001
.068
.803
.0
.0
.0
.0
.0
.002
.89
.019
.695
.047
.775
.447
.884
.989
.906
.797
.81
.966
.982
.849
.002
.06
.665
.479
.083
.002
.999
.004
.997
.012
.126
.0
.002
.0
.0
.003
.003
.012
.0
.808
.003
1.0
.06
.0
.04
.08
--
--
--
--
--
.005
.005
.004
.006
.084
.013
.001
.0
.003
.083
.0
.01
.024
.124
.281
.469
.157
.001
.003
.0
.0
.008
.001
.287
.008
.0
.181
.043
.997
.003
.001
.015
.053
.078
.078
1.0
.531
.779
.982
.002
.0
.001
.0
.008
.003
.002
.164
.013
.022
.015
.01
.017
.029
.001
.005
.0
.039
.041
.0
.318
.001
.001
.0
.01
.009
.011
.026
.141
.574
.001
.001
.0
1.0
.996
1.0
.003
.003
.001
1.0
.132
1.0
.0
.01
1.0
1.0
.982
.0
.0
.003
.064
.01
.0
.0
.0
.002
.001
.002
.076
.0
.022
.999
.001
.001
.495
.0
1.0
.007
.0
.948
.001
.001
.802
.023
.564
.726
.001
.003
.0
.0
1.0
.0
.0
.989
.0
.001
.002
.208
.102
.998
1.0
.993
.991
.0
.003
.917
.987
.0
.0
.007
1.0
.03
.298
.0
.0
.006
.0
.001
.0
.001
.005
.037
.255
.089
.0
.0
.0
.016
.0
.069
.0
.0
.001
.569
.962
.0
.004
.003
.002
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
Cadm1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
LOC102550632
LOC102550632
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
C
T
A
T
G
T
T
A
T
T
-
-
C
T
-
C
-
C
2
A
A
A
A
C
A
C
-
-
C
G
G
C
G
G
G
A
T
C
T
T
G
G
C
C
T
T
T
G
A
A
T
G
T
G
C
G
A
G
A
A
A
9
G
G
C
T
C
C
A
C
T
-
-
6
-
-
T
C
T
A
G
A
C
-
G
C
C
C
-
G
C
-
T
-
C
C
A
T
A
A
C
30
C
G
G
C
A
-
T
2
C
-
T
A
C
2
4
A
4
6
T
T
T
A
A
C
A
T
T
T
G
T
G
C
T
T
G
A
C
T
G
C
G
A
-
C
T
T
2
A
-
C
-
G
G
T
T
C
G
T
T
4
G
T
G
T
A
A
G
G
C
-
G
T
A
G
A
C
C
-
T
C
-
T
T
C
-
-
C
T
A
-
A
G
-
-
T
-
C
T
T
-
-
T
-
3
G
-
A
C
A
G
G
A
A
T
-
-
-
-
-
-
A
2
C
-
-
G
-
C
T
C
G
17
C
A
C
C
G
G
G
G
T
G
G
G
A
-
T
-
C
T
C
G
C
A
C
G
A
T
-
T
G
T
G
T
A
G
C
-
A
-
A
C
A
C
C
A
A
G
C
C
T
G
T
A
-
G
A
G
C
C
A
A
G
T
-
-
T
T
-
G
A
G
A
-
C
T
T
G
G
G
G
G
-
A
G
A
18
G
C
A
G
T
C
G
T
T
T
T
G
C
G
C
G
T
-
A
T
A
G
C
T
T
C
G
A
A
-
-
C
T
C
T
G
G
G
T
A
A
A
C
G
C
C
G
C
G
G
G
2
2
-
4
3
A
A
C
A
24
8
-
-
C
T
G
C
A
T
A
G
-
C
T
T
A
T
C
T
A
A
C
A
A
A
C
-
-
43
A
T
A
G
G
-
G
2
-
2
C
A
G
C
T
A
C
G
G
A
A
C
C
-
T
-
-
G
G
3
G
C
T
C
A
G
C
T
A
G
G
T
4
4
G
T
4
4
T
3
4
4
G
G
A
C
T
C
C
T
T
A
10
3
T
G
G
-
T
C
A
T
T
T
T
T
A
T
A
T
T
A
-
G
C
C
G
A
G
T
C
A
C
T
T
-
A
G
4
-
A
T
G
T
G
A
T
C
G
C
A
G
C
G
A
T
C
A
T
A
A
G
T
4
T
T
C
-
G
T
-
3
C
C
A
A
-
A
T
T
G
G
G
-
-
G
T
A
T
T
-
C
3
-
-
G
G
-
A
A
  51,859,749
  51,860,300
  51,860,568
  51,862,773
  51,863,396
  51,865,632
  51,868,041
  51,869,077
  51,869,488
  51,870,290
  51,876,675
  51,879,138
  51,885,243
  51,885,273
  51,885,476
  51,885,493
  51,886,018
  51,895,029
  51,896,217
  51,896,869
  51,898,900
  51,901,841
  51,901,853
  51,901,860
  51,901,873
  51,901,877
  51,901,881
  51,901,886
  51,902,542
  51,902,548
  51,902,551
  51,902,559
  51,902,565
  51,902,574
  51,902,576
  51,902,580
  51,902,584
  51,902,591
  51,902,593
  51,902,600
  51,902,601
  51,902,605
  51,902,610
  51,902,615
  51,902,619
  51,902,627
  51,902,631
  51,902,636
  51,902,641
  51,902,645
  51,902,647
  51,902,654
  51,902,662
  51,902,669
  51,902,675
  51,902,686
  51,902,687
  51,902,692
  51,908,757
  51,908,817
  51,908,933
  51,909,911
  51,909,916
  51,909,948
  51,910,206
  51,910,525
  51,910,530
  51,910,624
  51,910,629
  51,910,632
  51,910,635
  51,910,648
  51,910,655
  51,910,657
  51,910,661
  51,910,788
  51,911,158
  51,911,676
  51,911,738
  51,913,117
  51,913,474
  51,913,533
  51,918,111
  51,918,133
  51,918,260
  51,918,917
  51,920,903
  51,921,441
  51,921,703
  51,921,889
  51,923,081
  51,923,346
  51,924,477
  51,924,482
  51,924,858
  51,927,749
  51,928,531
  51,928,895
  51,930,970
  51,933,391
  51,933,547
  51,933,723
  51,934,644
  51,937,564
  51,939,345
  51,940,199
  51,941,719
  51,942,960
  51,945,816
  51,948,605
  51,948,769
  51,948,815
  51,948,821
  51,949,890
  51,951,625
  51,954,859
  51,955,458
  51,955,462
  51,957,338
  51,959,985
  51,959,995
  51,961,190
  51,961,305
  51,963,053
  51,963,687
  51,965,992
  51,966,517
  51,968,312
  51,968,700
  51,968,830
  51,969,512
  51,970,651
  51,970,846
  51,971,982
  51,972,629
  51,976,562
  51,976,588
  51,977,110
  51,977,502
  51,977,876
  51,977,967
  51,980,176
  51,980,399
  51,980,436
  51,981,934
  51,983,182
  51,985,383
  51,987,874
  51,988,000
  51,988,695
  51,988,697
  51,988,699
  51,989,501
  51,990,049
  51,992,079
  51,992,690
  51,993,940
  51,994,276
  51,995,660
  51,996,055
  51,996,184
  51,996,287
  51,996,293
  51,996,358
  51,996,668
  51,997,035
  51,997,225
  51,997,293
  51,997,328
  51,997,754
  51,998,161
  51,998,482
  51,998,671
  51,998,996
  51,999,056
  51,999,062
  51,999,362
  52,001,013
  52,001,030
  52,001,085
  52,001,353
  52,001,629
  52,002,049
  52,002,075
  52,002,846
  52,002,925
  52,002,966
  52,002,983
  52,003,005
  52,003,014
  52,003,021
  52,003,026
  52,003,033
  52,003,038
  52,003,039
  52,003,055
  52,003,058
  52,003,065
  52,003,077
  52,003,082
  52,003,103
  52,003,117
  52,003,145
  52,003,169
  52,003,175
  52,003,185
  52,003,197
  52,003,224
  52,003,233
  52,003,236
  52,003,247
  52,003,255
  52,003,279
  52,003,282
  52,003,291
  52,003,295
  52,003,300
  52,003,332
  52,003,346
  52,003,360
  52,003,366
  52,003,369
  52,003,376
  52,003,380
  52,003,385
  52,003,412
  52,003,421
  52,003,450
  52,003,475
  52,003,487
  52,003,494
  52,003,931
  52,004,528
  52,004,833
  52,004,835
  52,006,691
  52,007,327
  52,007,845
  52,007,890
  52,007,906
  52,007,907
  52,007,950
  52,007,952
  52,007,964
  52,007,970
  52,007,976
  52,010,623
  52,010,704
  52,010,889
  52,011,540
  52,013,962
  52,020,120
  52,020,486
  52,020,957
  52,021,388
  52,021,643
  52,021,675
  52,022,704
  52,023,688
  52,025,531
  52,025,726
  52,025,888
  52,026,230
  52,026,507
  52,027,113
  52,027,557
  52,027,826
  52,028,206
  52,028,436
  52,029,258
  52,029,549
  52,030,886
  52,032,014
  52,032,291
  52,032,454
  52,033,096
  52,033,228
  52,033,529
  52,033,638
  52,033,829
  52,034,048
  52,034,583
  52,035,895
  52,036,230
  52,036,287
  52,036,791
  52,036,940
  52,037,356
  52,037,456
  52,037,518
  52,038,468
  52,039,702
  52,039,729
  52,040,607
  52,040,844
  52,041,299
  52,043,513
  52,043,651
  52,045,224
  52,045,225
  52,045,227
  52,045,230
  52,046,077
  52,046,484
  52,046,608
  52,046,882
  52,047,713
  52,048,548
  52,050,042
  52,050,722
  52,051,267
  52,051,559
  52,051,817
  52,051,892
  52,051,928
  52,051,950
  52,051,959
  52,052,009
  52,052,272
  52,052,603
  52,052,933
  52,052,935
  52,054,103
  52,054,854
  52,054,871
  52,055,120
  52,055,157
  52,055,509
  52,055,596
  52,056,011
  52,056,080
  52,056,260
  52,056,292
  52,056,786
  52,057,115
  52,057,834
  52,057,846
  52,057,876
  52,057,881
  52,057,886
  52,057,953
  52,058,167
  52,058,360
  52,058,517
  52,058,553
  52,058,579
  52,058,628
  52,058,653
  52,058,791
  52,059,136
  52,059,326
  52,059,682
  52,059,707
  52,060,322
  52,060,524
  52,060,554
  52,060,666
  52,060,835
  52,060,886
  52,061,300
  52,061,399
  52,062,002
  52,062,137
  52,062,211
  52,062,217
  52,062,222
  52,062,225
  52,062,229
  52,062,240
  52,062,251
  52,062,274
  52,062,285
  52,062,302
  52,062,618
  52,062,622
  52,062,629
  52,062,866
  52,063,854
  52,064,110
  52,064,318
  52,064,882
  52,064,924
  52,065,933
  52,065,939
  52,066,026
  52,066,629
  52,066,876
  52,066,878
  52,067,721
  52,067,945
  52,068,391
  52,068,744
  52,069,084
  52,069,481
  52,069,602
  52,071,046
  52,072,416
  52,073,138
  52,073,142
  52,073,143
  52,073,149
  52,073,156
  52,073,167
  52,073,168
  52,073,198
  52,073,201
  52,073,214
  52,073,276
  52,076,419
  52,077,086
  52,077,648
  52,079,004
  52,079,042
  52,079,059
  52,080,607
  52,080,938
  52,081,063
  52,081,543
  52,081,573
  52,081,618
  52,082,090
  52,082,119
  52,082,536
  52,082,625
  52,082,656
  52,082,982
  52,083,251
  52,083,690
  52,083,852
  52,083,962
  52,084,198
  52,084,768
  52,084,876
  52,085,019
  52,085,026
  52,085,033
  52,085,041
  52,085,406
  52,085,525
  52,085,661
  52,086,267
  52,086,351
  52,086,422
  52,086,461
  52,086,540
  52,086,549
  52,086,568
  52,086,623
  52,086,730
  52,086,803
  52,087,263
  52,087,270
  52,087,501
  52,087,573
  52,087,755
  52,087,762
  52,087,993
  52,088,009
  52,088,021
  52,088,023
  52,088,065
  52,088,104
  52,088,280
  52,088,651
  52,088,675
  52,089,723
  52,089,724
  52,089,923
  52,089,954
  52,090,130
  52,090,284
  52,091,054
  52,091,177
  52,093,790
  52,094,230
  52,094,503
  52,095,214
  52,095,375
  52,095,831
  52,095,832
  52,120,331
  52,121,169
  52,121,221
  52,121,901
  52,122,784
  52,122,862
  52,124,219
  52,124,639
  52,124,760
  52,124,932
  52,125,473
  52,126,331
  52,126,387
  52,127,414
  52,128,543
  52,128,594
  52,128,625
  52,129,007
  52,129,523
  52,129,953
  52,130,820
  52,131,323
  52,132,600
  52,133,211
  52,135,011
  52,135,485
  52,137,683
  52,138,199
  52,141,127
  52,142,398
  52,142,529
  52,148,059
  52,149,116
  52,150,009
  52,151,924
  52,152,637
  52,155,924
  52,156,209
  52,159,739
  52,159,769
  52,159,777
  52,160,695
  52,162,466
  52,164,573
  52,167,171
  52,167,890
  52,168,935
  52,171,270
  52,172,258
  52,173,122
  52,173,913
  52,173,981
  52,174,102
  52,174,132
  52,175,102
  52,175,233
  52,175,483
  52,175,679
  52,176,276
  52,176,627
  52,177,435
  52,177,790
  52,178,044
  52,178,466
  52,178,787
  52,179,412
  52,181,659
  52,181,881
  52,182,173
  52,182,447
  52,182,911
  52,183,570
  52,184,404
  52,186,219
  52,186,236
  52,186,432
  52,186,564
  52,186,612
  52,187,431
  52,188,409
  52,189,427
  52,189,541
  52,189,717
  52,189,864
  52,189,883
  52,191,001
  52,192,281
  52,197,144
  52,197,151
  52,199,336
G
G
C
G
G
A
G
G
C
C
C
-/4
3
-
G
15
T
C
T
-
-
C
G
G
T
T
-
T
A
A
T
T
-
C
-
C
-
-
A
G
C
-
-
-
-
-
-
-
-
C
-
-
-
-
T
G
T
-
A
T
G
G
-
A
A
T
C
-
T
G
-
A
T
3
-
C
C
C
T
C
G
A
-
-
5
A
T
T
T
G
T
T
2
C
2
T
T
G
C
T
-
T
30/-
T
A
A
T
C
9
C
-
-
C
C
-
T
-
-
T
-
-
C
G
C
T
G
T
C
C
C
C
A
C
A
T
G
C
A
G
T
C
A
G
A
T
12
T
G
C
-
C
T
T
4
T
A
A
C
G
A
C
C
-
A
A
A
C
T
G
A
A
T
C
C
G
C
A
C
T
T
A
C
T
29
C
A
-
G
T
-
-
-
2
G
A
A
G
-
G
-
-
A
T
T
-
T
-
-
G
-
T
-
-
A
-
-
-
T
G
A
G
G
T
-
-
-
T
C
-
T
-
G
T
-
-
T
C
G
A
A
A
-
A
-
-
-
A
-
4
G
T
C/A
T/A
T
C
T
G
G
-
G
A
13
G
A
-
A
C
G
A
T
A
G
2
G
T
T
T
T
G
G
C
A
T
C
A
C
G
C
T
G
T
G
T
G
G
A
C
T
2
G/3
A
A
A
G
A
G
T
T
C
C
A
A
A
A
A
C
G
A
G
18/-
T
T
G
T
C
T
-
G
C
C
C
C
T
T
A
A
C
-/2
G
C
G
T
T
G
G
G
A
G
G
-/G
A
A
C
T
C
A
T
T
G
G
C
G
A
-
-
-
-
-
-
-
-
-
-
3
-
-
C
G
-
G
-
-
3
6
T
C
A
T
G
-
G
A
T
T
C
C
G
G
G
G
G
G
T
G
-
T
-
38
T
-
T
A
G
A
A
6
C
-
4
-
T
G
T
T
C
C
T
A
A
G
G
T
T
4
C
T
3
A
C
-
T
A
A
T
G
A
T
A
G
-
A
-
4/-
-
A
-
-
4/-
T/-
3/-
4/-
-
T
A
G
A
C
T
T
C
C
G
-
-
C
C
A
T
A
T
G
A
G
G
C
C
G
C
C
C
C
T
3
A
A
A
A
G
T
C
G
C
A
C
C
-/T
G
A
-
C
G
C
A
-
A
G
C
T
A
A
G
A
T
-
C
C
T
C
A
G
G
A
G
-
C
-
T
A
A
G
C
-
T
A
T
G
T
G
C
A
A
A
A
T
T
G/C
C
-
-
C
T
-
3/-
A
T
C
C
C
C
G