Variant Visualizer (Variants)

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Sequence Annotation

Assembly Rnor_6.0

Conservation

Genes ( + )

Genes ( - )

Rnor 6.0

HXB4/IpcvMcwi (2020)

.001	.023	.084	.018	.128	.006	.052	.001	.074	.118	--	.016	.037	.015	.232	.626	.604	.0	.007	.054	.054	.0	.0	.037	.055	.029	--	--	--	--	--	--	.001	.037	.001	.0	.038	.001	.014	.005	.013	.0	.003	.029	--	.003	.003	.057	.013	.003	.153	.036	.007	--	--	.706	.001	.001	1.0	.001	.024	.004	.021	.0	.014	.028	.006	.016	.042	.013	.394	.14	.0	.001	.001	.238	.211	.009	.004	.001	.144	.0	.016	.007	.01	.358	.311	.121	.001	.0	.007	.009	.003	.061	.057	.009	--	--	--	--	--	.007	.102	.109	.005	.002	.001	.021	.0	.008	.002	.008	.004	.003	.001	.002	.017	.003	.179	.018	.19	.085	.036	.984	.71	.206	.008	.002	.013	--	--	.012	.292	.0	.002	.073	.055	.149	.974	.098	--	.016	.028	.479	.445	.282	.189	--	.107	.563	.062	.034	.077	.537	--	--	--	--	--	.048	.113	.034	.994	.038	.103	.001	.0	.001	.122	.045	.079	.009	.019	.008	.014	.006	.008	.021	.012	.008	.006	.01	.02	.001	.006	.01	.076	.061	.016	.019	.114	.044	.008	.147	.168	.093	.052	.025	.037	.012	.011	.036	.547	.0	.922	.176	.185	.065	.002	.163	.318	.134	.08	.011	.003	.003	.425	.465	.301	.271	.435	.24	.997	.005	.47	.258	.001	.667	.007	.913	.213	.008	.001	.613	.032	.021	.0	.012	.001	.004	.004	.067	.004	.0	.002	.015	.006	.005	.002	.032	.005	.004	.003	.005	.025	.03	.0	.042	.059	.005	.002	.011	.007	.118	.005	.001	.01	.013	.001	.001	--	--	.001	.001	.132	.0	.003	.032	.0	.0	.0	.0	.053	.974	.001	.004	.08	.093	.075	.644	.011	.001	.001	.002	.004	.013	--	.009	.004	.207	.008	.048	.0	.009	.001	.069	.001	.011	.276	.082	.004	.042	.099	.005	.002	.002	.029	.0	.01	.001	.004	.001	.0	.001	.0	.982	.002	.0	.002	.001	.001	.008	.006	.009	.0	.002	.001	.0	.0	.066	.074	.013	.004	.003	.017	.006	.001	.033	.014	.09	.0	.002	.0	.0	.984	.464	.301	.008	.112	.337	.052	.226	.013	.049	.065	.004	.0	.001	.018	.011	.002	.042	.01	.138	.004	.001	.001	.006	.007	.002	.026	.124	.006	.123	.322	.001	.002	.047	.023	.004	.011	.017	.016	.005	.025	.055	.051	.01	.503	.255	.016	.035	.035	--	--	--	--	--	--	.279	.001	.025	.005	.002	.618	--	.0	.028	.007	.794	.01	.013	.001	.002	.0	.998	.004	.016	.018	.0	.013	.998	.154	.007	.021	.006	.14	.05	.001	.04	.008	.147	.003	.002	.026	.016	.085	.008	.001	.0	.001	.002	.043	--	.016	.0	.033	.001	.012	.006	.02	.01	.003	.03	.0	.0	.49	.006	.0	.074	.0	.0	.141	.023	.024	.012	.002	.001	.001	.007	.0	.02	.009	.008	.027	.089	.133	.0	.029	.004	.0	.0	.0	.004	.0	.012	.001	.0	.001	.0	.0	.0	.042	.005	.019	.0	.001	.001	.156	.142	.026	.012	.003	.0	.178	.114	.014	.0	.006	.005	.008	.001	.0	.033	.005	.027	.011	.029	.003	.0	--	--	--	--	--	.586	--	--	--	.044	.002	.065	.005	.092	.006	.049	.0	--	--	--	.031	.008	.0	.005	.0	.005	.004	.0	.091	.005	.002	.007	.015	.019	.0	.0	.0	1.0	.054	.031	.143	.004	--	--	.034	.011	.061	.007	.001	.007	.114	.999	.0	.0	.004	.182	.146	.081	.211	.001	.051	.081	1.0	.018	.033	--	.004	.0	.002	.001	1.0	.003	.002
Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a										Cacna1a
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
C	C	C	A	C	C	C	A	C	3	T	T	A	C	T	A	C	T	T	G	8	G	T	G	T	T	G	C	G	G	C	T	C	C	A	T	C	A	G	A	T	C	C	A	T	-	A	G	A	T	T	A	G	-	-	2	A	C	C	C	T	C	G	C	-	C	A	A	3	T	C	C	G	T	G	C	G	C	T	T	C	A	G	T	G	27	T	T	T	T	T	A	-	-	T	T	G	-	G	G	T	T	A	T	C	A	G	-	-	A	T	C	T	G	G	A	A	A	-	-	-	G	4	T	C	A	G	G	C	C	A	G	C	-	C	A	13	C	T	C	T	T	A	T	C	C	A	G	-	T	A	T	T	A	G	G	-	G	G	G	A	A	C	G	G	C	G	G	A	A	C	A	2	-	-	-	A	-	-	-	-	A	-	C	-	A	T	-	C	T	-	-	-	A	T	A	A	C	C	A	C	T	G	T	G	T	A	T	A	12	C	A	C	2	A	T	T	T	G	C	A	G	G	A	G	T	T	C	2	8	A	C	C	-	C	G	G	A	A	2	16	T	G	-	A	C	T	G	G	T	G	C	C	A	G	C	C	C	G	C	A	T	C	G	G	G	4	G	G	T	-	A	2	-	G	G	C	T	G	A	C	C	T	-	T	-	-	T	C	C	C	-	2	C	G	G	T	G	A	C	T	T	C	C	G	G	A	T	G	C	C	G	A	A	A	T	C	G	A	C	T	T	A	T	A	T	-	T	G	-	A	G	A	2	A	C	A	G	C	G	2	T	G	T	G	G	A	G	A	G	G	A	A	T	G	-	-	A	A	A	A	108	A	T	G	C	C	-	G	T	-	T	C	2	G	G	G	-	T	C	G	G	G	C	C	A	T	-	C	G	C	-	-	-	-	-	G	T	-	C	-	G	A	-	-	G	-	-	-	2	C	-	-	G	A	T	T	T	G	-	A	G	G	G	T	T	A	C	T	G	A	C	G	2	C	G	A	117	A	G	G	4	12	G	10	A	-	G	T	T	G	C	A	-	T	C	T	G	C	C	T	A	-	T	A	T	G	A	A	-	G	A	-	G	A	G	G	G	A	-	A	C	A	C	G	G	C	A	C	A	C	A	A	G	G	G	A	A	-	T	T	G	A	G	A	G	G	G	C	G	A	2	T	G	A	C	C	T	G	19	A	G	T	A	C	G	A	-	G	C	G	G	G	T	C	T	G	G	A	A	G	19	C	C	A	A	T	T	G	T	G	C	A	C	A	-	C	-	C	C	T	-	A	A	G	A	A	T	T	A	G	A	T	C	C	A	T	T	C	3	4	C	A	A	14	A	-	C	G	G	-	-	G	C	A	A	A	A	C	A	A	T	G
25,453,314	25,454,137	25,454,224	25,454,805	25,455,483	25,455,643	25,456,243	25,456,364	25,456,859	25,456,924	25,458,009	25,458,241	25,458,471	25,458,493	25,458,643	25,458,921	25,458,960	25,459,352	25,459,958	25,460,023	25,460,325	25,461,016	25,461,362	25,461,391	25,462,431	25,462,951	25,463,282	25,463,345	25,463,363	25,463,446	25,463,457	25,463,600	25,463,804	25,464,008	25,464,400	25,464,424	25,465,018	25,465,421	25,465,946	25,466,036	25,466,318	25,466,439	25,467,203	25,467,786	25,467,901	25,467,992	25,467,993	25,468,107	25,468,131	25,468,185	25,468,381	25,468,544	25,468,587	25,468,756	25,468,911	25,468,949	25,469,539	25,469,625	25,470,113	25,470,233	25,470,331	25,470,336	25,470,851	25,471,254	25,471,451	25,471,612	25,472,374	25,472,407	25,472,627	25,472,679	25,472,699	25,473,085	25,473,298	25,473,457	25,473,979	25,474,154	25,474,185	25,474,357	25,474,424	25,474,580	25,474,607	25,474,954	25,475,050	25,475,807	25,476,851	25,476,902	25,477,040	25,477,097	25,477,818	25,477,915	25,477,969	25,478,154	25,478,160	25,478,875	25,478,877	25,478,895	25,479,471	25,479,482	25,479,509	25,479,843	25,480,047	25,480,404	25,480,809	25,480,827	25,481,346	25,481,368	25,481,617	25,482,468	25,482,850	25,483,098	25,483,115	25,483,423	25,483,796	25,484,447	25,484,652	25,484,979	25,485,389	25,485,519	25,485,627	25,485,691	25,485,713	25,486,005	25,487,374	25,487,597	25,487,795	25,487,808	25,488,056	25,488,260	25,488,419	25,488,671	25,488,877	25,489,979	25,490,341	25,490,463	25,490,685	25,491,010	25,491,055	25,491,709	25,492,024	25,492,941	25,494,429	25,494,619	25,494,819	25,495,519	25,495,794	25,495,880	25,496,454	25,496,974	25,497,113	25,498,159	25,498,246	25,498,305	25,499,004	25,499,159	25,499,233	25,499,247	25,499,274	25,499,278	25,499,305	25,499,425	25,499,972	25,500,222	25,500,496	25,500,655	25,500,695	25,501,004	25,501,134	25,501,362	25,502,107	25,502,747	25,503,348	25,503,496	25,503,757	25,503,762	25,503,770	25,503,792	25,503,798	25,503,807	25,503,824	25,503,826	25,503,834	25,503,836	25,503,841	25,503,855	25,503,858	25,503,860	25,503,909	25,503,932	25,503,936	25,503,940	25,503,961	25,504,417	25,504,598	25,505,037	25,505,545	25,505,593	25,505,688	25,505,734	25,505,894	25,506,139	25,506,522	25,506,703	25,506,730	25,506,787	25,506,964	25,507,051	25,507,442	25,508,057	25,508,897	25,509,109	25,509,436	25,510,222	25,510,477	25,511,056	25,511,582	25,512,190	25,512,426	25,512,434	25,512,593	25,513,044	25,513,177	25,513,369	25,513,966	25,515,157	25,515,710	25,515,906	25,516,047	25,516,347	25,516,646	25,518,123	25,519,661	25,520,067	25,520,461	25,524,105	25,524,159	25,525,381	25,527,508	25,527,924	25,528,110	25,530,150	25,530,153	25,531,260	25,531,635	25,531,654	25,531,659	25,532,133	25,532,164	25,532,633	25,532,813	25,534,829	25,535,210	25,535,372	25,535,531	25,535,640	25,535,700	25,535,847	25,536,276	25,536,761	25,536,843	25,536,982	25,537,328	25,537,707	25,538,142	25,538,151	25,538,287	25,538,450	25,538,713	25,540,264	25,540,884	25,541,574	25,542,133	25,542,201	25,542,235	25,542,794	25,543,286	25,544,022	25,544,901	25,545,385	25,545,834	25,546,509	25,546,845	25,547,230	25,547,292	25,551,053	25,551,261	25,551,445	25,552,057	25,552,058	25,552,148	25,553,530	25,553,742	25,554,840	25,554,841	25,554,843	25,554,960	25,555,386	25,555,534	25,555,914	25,555,943	25,557,206	25,557,298	25,557,406	25,558,282	25,558,401	25,559,707	25,559,884	25,560,379	25,561,297	25,561,401	25,562,740	25,563,210	25,565,482	25,567,182	25,568,037	25,568,063	25,569,013	25,569,444	25,569,607	25,569,700	25,569,952	25,570,156	25,570,165	25,570,517	25,570,878	25,570,887	25,571,179	25,571,551	25,571,565	25,571,599	25,571,601	25,571,616	25,571,754	25,571,758	25,571,765	25,571,772	25,571,776	25,571,780	25,571,796	25,571,799	25,571,805	25,571,813	25,571,824	25,571,829	25,571,830	25,571,843	25,571,856	25,573,111	25,573,905	25,574,329	25,574,436	25,574,937	25,575,066	25,575,290	25,576,135	25,576,814	25,577,022	25,579,487	25,580,117	25,580,201	25,580,262	25,580,287	25,580,480	25,580,652	25,580,715	25,580,888	25,581,410	25,581,920	25,581,923	25,582,299	25,582,315	25,582,876	25,584,246	25,584,363	25,585,064	25,586,584	25,587,154	25,589,218	25,590,502	25,590,791	25,591,512	25,592,258	25,592,329	25,593,117	25,594,003	25,594,691	25,594,954	25,595,992	25,597,316	25,597,322	25,597,327	25,597,340	25,597,344	25,597,355	25,597,361	25,597,379	25,597,391	25,600,711	25,601,029	25,603,866	25,603,902	25,606,753	25,607,616	25,608,412	25,609,819	25,609,822	25,609,899	25,609,906	25,609,910	25,609,917	25,609,953	25,610,014	25,610,022	25,610,040	25,612,648	25,615,280	25,619,739	25,620,524	25,622,231	25,622,590	25,625,568	25,625,895	25,626,540	25,627,462	25,627,921	25,629,260	25,629,436	25,629,803	25,630,724	25,630,765	25,630,855	25,631,057	25,632,388	25,633,772	25,635,467	25,635,667	25,635,757	25,636,622	25,637,957	25,638,955	25,639,381	25,640,088	25,640,297	25,642,386	25,642,432	25,642,438	25,643,733	25,643,958	25,644,560	25,644,674	25,647,750	25,650,265	25,650,267	25,652,372	25,653,541	25,654,697	25,656,771	25,659,178	25,661,202	25,661,511	25,663,130	25,663,926	25,664,660	25,664,807	25,664,823	25,666,134	25,668,329	25,668,725	25,670,167	25,671,398	25,674,735	25,675,314	25,675,826	25,676,341	25,678,186	25,678,211	25,678,245	25,678,637	25,678,860	25,678,905	25,678,995	25,679,040	25,679,160	25,679,342	25,679,882	25,680,176	25,680,427	25,680,469	25,680,837	25,680,879	25,681,303	25,681,380	25,681,461	25,681,473	25,682,388	25,682,426	25,682,492	25,683,314	25,683,478	25,683,646	25,683,980	25,684,494	25,684,596	25,685,849	25,685,865	25,685,892	25,686,605	25,686,780	25,686,781	25,688,901	25,688,903	25,689,011	25,689,665	25,690,376	25,690,649	25,690,895	25,691,086	25,691,838	25,692,051	25,692,155	25,692,185	25,692,423	25,692,481	25,692,529	25,692,709	25,692,768	25,692,791	25,693,583	25,693,843	25,694,364	25,694,488	25,695,319	25,695,320	25,695,329	25,695,333	25,695,334	25,696,130	25,696,540	25,696,543	25,696,827	25,697,681	25,697,763	25,698,822	25,698,934	25,699,569	25,699,580	25,699,616	25,700,304	25,700,885	25,701,127	25,701,281	25,702,319	25,702,348	25,702,788	25,703,048	25,703,363	25,703,502	25,703,823	25,705,888	25,707,113	25,707,311	25,708,026	25,708,595	25,708,596	25,708,598	25,708,754	25,708,898	25,709,062	25,710,929	25,714,029	25,715,757	25,716,057	25,717,331	25,717,488	25,717,666	25,718,042	25,718,217	25,718,651	25,719,043	25,721,196	25,722,880	25,723,195	25,724,503	25,725,601	25,726,190	25,728,295	25,729,074	25,729,246	25,729,648	25,730,000	25,731,070	25,733,497	25,736,449	25,737,559	25,738,380	25,738,390	25,738,513	25,745,074	25,745,704	25,746,020	25,747,676	25,748,044	25,748,627	25,749,194
T	T	T	G	T	A	G	C	T	-	C	C	T	T	C	G	T	C	C	A	-	A	A	A	G	C	A	T	A	A	A	C	T	G	G	C	T	G	-	G	G	T	T	G	C	T	T	C	G	G	C	G	T	2	4	-	G	T	T	T	G	A	C	G	3	T	G	T	-	C	T	T	A	C	C	T	A	T	A	G	-	C	A	C	A	-	G	C	G	C	C	G	9	-/9	T/C	T/C	A	6	C	T	A	C	G	G	G	G	-	A	C	G	C	T	A	T	A	G	G	T	2	4	16	A	-	C	T	G	C	C	G	T	G	A	T	3	T	G	-	A	-	T	G	C	C	C	T	A	G	A	T	-	G	A	A	T	T	T	3	T	A	A	G	G	T	T	A	A	A	A	G	-	T	G	-	3	A	C	-	A	C	C	T	C	2	-	C	C	-	2	A	-	C	4	A	G	C	G	G	T	T	G	T	A	A	C	T	C	G	C	T	-	G	G	T	-	G	C	C	G	T	G	-	-	A	G	A	C	G	A	2/-	-	G	T	G	3	T	C	T	G	G	-	-	A	A	2	C	G	C	A	A	G	A	T	A	G	A	G	T	T	A	T	G	C	T	T	A	A	-	T	A	G	8	C	2/-	C	A	A	T	C	A	G	T	T	C	33	G	15	3	A	A	T	T	3	-	A	A	C	C	A	G	G	C	C	G	G	A	A	G	C	T	T	T	A	G	G	G	C	A	T	G	T	G	A	G	C	G	C	T	-	A	A	-	-	G	-	-	-	-	T	-	-	-	-	-	C	-	-	G	A	G	-	A	G	G	C	A	5	6	G	G	G	G	-	C	C	A	G	-	2	T	C	C	C	T	-	A	T	-	2	G	T	C	T	A	T	T	G	C	G	-	-	-	G	G	G	G	G	A	C	4	T	T	-	G	G	T	-	G	T	T	-	-	G	A	A	C	T/G	C	C	A	4	G	A	C	A	C	C	G	T	C	A	G	A	A	2/-	T	T	T	117/-	G	A	A	-	-	A	10/-	G	2	A	C	C	G/T	C/T	G	12	C	T	C	A	T	T	G	G	4	C	G	C	A	G	G	A	A	G	A	A	G	T	T	A	G	T	G	A	G	T	A	-	T	T	T	G	T	G	G	A	T	T	G	G	T	C	G	C	G	A	-	A	A	A	A	C	G	-	C	A	C	T	T	C	A	-	G	A	C	G	A	A	G	3	A	T	G/C	G/C	G/C	T/-	C/A	-	A	A	C	G	T	-	T	T	G	G	C	C	C	C	A	T	G	T	G	10	T	C	T	T	G	T	T	-	A	G	G	C	C	G	A	G	C	T	A	G	C	C	T	-	4/-	G	T	C	-	-	3	T	C	A	A	4	A	-	C	C	-	G	T	G	-	C	A