Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 139,124 (bp)   Positions: 93
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
Buf/N (MCW) 
.049
--
.005
.018
.046
--
--
--
--
.106
.001
.676
.891
.031
.662
.006
.009
.009
.001
--
.088
.038
.042
.166
.073
.011
.201
.006
.46
.225
--
--
--
--
--
.278
.006
.001
.004
.001
.017
--
--
.029
.473
.026
.931
.798
--
--
--
--
--
--
--
--
--
--
.12
.391
.001
.382
.002
.003
.008
.009
.024
.087
--
--
--
--
--
--
.023
.009
.001
.007
.006
.328
.021
.023
.019
.584
.057
.029
.005
.032
.146
.018
.037
.004
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Boll
Boll
Boll
Boll
Boll
Boll
Boll
Boll
Boll
Boll
T
A
A
T
G
G
C
G
G
T
C
C
A
C
C
G
G
C
A
A
G
A
C
T
T
G
T
T
C
T
C
G
C
A
T
A
C
A
T
A
C
T
G
C
A
G
A
A
C
A
T
G
T
A
C
C
T
T
A
G
G
T
C
T
A
G
T
G
T
C
T
A
T
A
A
C
C
C
C
C
A
C
C
C
T
T
C
C
G
C
C
T
A
  61,839,496
  61,840,124
  61,844,045
  61,845,194
  61,848,017
  61,849,097
  61,873,975
  61,874,437
  61,876,404
  61,876,676
  61,877,196
  61,877,468
  61,877,512
  61,878,523
  61,879,187
  61,879,547
  61,884,320
  61,885,232
  61,885,802
  61,887,899
  61,889,203
  61,889,582
  61,889,585
  61,896,511
  61,896,776
  61,899,168
  61,900,655
  61,900,781
  61,901,959
  61,902,228
  61,903,436
  61,903,467
  61,906,222
  61,911,264
  61,912,089
  61,913,622
  61,913,715
  61,915,198
  61,915,225
  61,917,258
  61,917,275
  61,918,066
  61,919,609
  61,921,482
  61,923,967
  61,924,274
  61,925,835
  61,928,761
  61,930,645
  61,930,739
  61,930,771
  61,931,700
  61,932,303
  61,933,325
  61,933,571
  61,935,339
  61,935,798
  61,936,153
  61,937,377
  61,937,533
  61,937,611
  61,938,755
  61,939,190
  61,939,623
  61,939,881
  61,939,936
  61,940,227
  61,940,339
  61,943,149
  61,943,208
  61,944,258
  61,944,493
  61,947,211
  61,947,275
  61,947,808
  61,955,291
  61,955,301
  61,956,115
  61,956,945
  61,958,061
  61,960,855
  61,961,027
  61,961,031
  61,963,848
  61,964,265
  61,964,712
  61,964,913
  61,967,508
  61,967,670
  61,969,479
  61,969,595
  61,970,239
  61,972,548
G
G
T
C
G/A
A
T
G/A
A
A
G
T
T
T
T
C
C
T
T
G
A
C
A
C
C
A
G
C
G
A
G
T
G
G
T/A
G
T
G
C
G
T
C
A
T
G
A
G
G
T
G
C
A
G
C
T
T
T/C
C
A/G
T
A
C
T
A
G
T
A
A
C
T
C
G
C
T
G
C/G
T
G
G
T
G
G
A
T
C
C
T
T
T
T
T
A
G