Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 116,400 (bp)   Positions: 180
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
GK/Ox (RGD) 
.0
.0
.003
.001
.001
.034
.069
.001
.971
.0
.0
.001
.0
.003
.017
.036
.0
.045
.002
.0
.003
.003
.002
.005
.794
.005
.027
.013
.001
.0
.0
.0
.001
.005
.067
.008
.907
.001
.016
.001
.0
.028
.007
.023
.004
.009
.001
.0
.0
.001
.001
.001
.0
.0
.004
.0
.0
.0
.0
.0
.006
.0
.001
.004
.005
.177
.02
.003
.253
.002
.002
.001
.007
.003
.0
.001
.108
.001
.001
.0
.001
.0
.002
.0
.0
.007
.0
.147
.681
.005
.0
.038
.001
.0
.0
.001
.011
.0
.0
.0
.001
.0
.0
.003
.002
.023
.0
.0
.041
.012
.003
.0
.0
.0
.029
.0
.0
.0
.0
.0
.522
.027
.002
.001
.002
.0
.001
.012
.001
.0
.0
.007
.129
.004
.0
.004
.001
.01
.644
.002
.05
.331
.628
.0
.0
.002
.037
.004
.001
.003
.01
.0
.003
.858
.995
.0
.002
.002
.0
.001
.049
.0
.0
.004
.001
.0
.002
.002
.001
.091
.766
.027
.064
.002
.002
.001
.039
.998
.994
.998
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
Bcar3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
G
G
A
A
A
C
A
A
C
T
T
C
C
A
T
T
A
C
G
G
T
C
T
T
G
C
A
T
T
T
C
T
C
G
G
T
A
C
C
A
T
A
T
A
A
A
T
A
T
C
T
A
G
T
T
G
A
A
T
G
T
T
G
T
G
G
A
G
A
A
G
G
T
T
A
C
A
C
T
G
T
T
C
C
G
T
G
A
A
A
G
G
G
A
A
G
C
T
G
C
A
T
C
C
G
A
A
A
G
G
T
T
C
T
T
A
C
T
G
C
G
A
T
G
G
C
A
G
T
C
T
C
A
A
G
G
T
A
C
T
A
G
A
G
G
C
A
A
T
C
A
G
T
C
C
G
C
T
C
T
C
G
T
C
G
T
A
T
A
T
G
C
C
G
A
G
C
T
A
  226,563,296
  226,563,509
  226,563,527
  226,567,769
  226,568,162
  226,568,187
  226,568,401
  226,568,596
  226,568,709
  226,570,990
  226,571,091
  226,571,333
  226,571,632
  226,574,011
  226,574,127
  226,574,285
  226,574,776
  226,575,494
  226,576,103
  226,576,584
  226,577,133
  226,577,379
  226,579,439
  226,579,619
  226,580,106
  226,580,927
  226,581,159
  226,581,336
  226,581,447
  226,581,905
  226,582,824
  226,583,263
  226,584,143
  226,584,686
  226,587,318
  226,588,575
  226,590,525
  226,593,755
  226,593,875
  226,593,878
  226,593,879
  226,594,084
  226,594,918
  226,595,434
  226,595,698
  226,597,373
  226,598,199
  226,598,329
  226,598,354
  226,598,911
  226,600,174
  226,601,171
  226,601,950
  226,602,334
  226,602,668
  226,602,986
  226,603,257
  226,603,333
  226,603,413
  226,605,313
  226,607,011
  226,607,690
  226,608,893
  226,609,836
  226,609,932
  226,609,941
  226,611,055
  226,611,465
  226,611,845
  226,612,194
  226,613,108
  226,613,854
  226,614,452
  226,616,605
  226,617,850
  226,619,073
  226,628,749
  226,628,792
  226,628,883
  226,631,571
  226,632,284
  226,633,251
  226,633,646
  226,634,303
  226,636,353
  226,637,371
  226,639,697
  226,639,802
  226,642,605
  226,643,347
  226,643,829
  226,644,475
  226,644,937
  226,645,118
  226,645,124
  226,645,440
  226,646,364
  226,646,620
  226,646,641
  226,646,652
  226,647,144
  226,647,567
  226,648,023
  226,648,119
  226,648,350
  226,648,674
  226,648,833
  226,648,857
  226,648,871
  226,648,940
  226,649,606
  226,649,894
  226,650,704
  226,650,812
  226,650,906
  226,651,576
  226,651,763
  226,651,764
  226,652,232
  226,652,822
  226,653,598
  226,654,279
  226,654,507
  226,654,606
  226,654,836
  226,655,524
  226,656,473
  226,657,775
  226,658,019
  226,659,450
  226,659,473
  226,659,701
  226,659,954
  226,660,310
  226,660,807
  226,660,964
  226,661,198
  226,661,232
  226,661,364
  226,661,465
  226,661,559
  226,661,594
  226,661,606
  226,662,293
  226,662,422
  226,663,266
  226,663,617
  226,664,498
  226,665,131
  226,665,168
  226,665,633
  226,666,897
  226,667,760
  226,667,781
  226,668,151
  226,670,249
  226,671,914
  226,672,105
  226,672,610
  226,672,757
  226,672,793
  226,673,445
  226,673,465
  226,673,564
  226,673,573
  226,673,861
  226,674,546
  226,674,549
  226,675,514
  226,676,220
  226,676,734
  226,676,761
  226,677,601
  226,677,614
  226,677,820
  226,678,368
  226,678,528
  226,678,968
  226,679,294
  226,679,299
G
T
C
G
G
G
T
G
G
T
C
A
T
T
G
C
C
G
T
A
T
C
A
C
G
T
A
G
C
C
C
T
G
T
A
A
C
G
T
T
G
G
G
A
G
G
G
C
G
C
T
C
C
A
C
C
A
G
G
C
T
C
C
A
C
A
A
G
A
G
G
T
A
G
G
G
A
G
A
C
A
C
C
T
T
A
C
A
G
G
G
A
A
A
G
G
A
T
C
A
T
G
C
T
T
T
T
G
T
T
A
C
C
T
C
C
G
T
C
A
T
A
T
G
A
A
T
G
C
C
A
A
T
G
C
T
C
G
C
T
C
G
A
G
A
T
T
T
C
C
A
G
A
C
A
T
A
T
C
T
C
T
A
C
T
A
C
G
C
G
C
C
T
T
A
G
A
T
C
T