Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 39,986 (bp)   Positions: 90
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
SS/Jr (RGD) 
.849
.002
.002
.0
.086
.0
.018
.017
.016
.024
.143
.222
.149
.051
.003
.003
.01
.007
.045
.005
.0
.006
.326
--
.029
.045
.137
.005
.019
.001
.002
.051
.115
.032
.199
.121
.01
.147
.128
.071
.084
.006
.003
.014
.043
.151
.005
.002
.003
.154
.012
.003
.001
.002
.0
.0
.001
.0
.01
.015
.0
.001
.001
.0
.047
.006
.012
.07
.067
.123
.008
.051
.024
.019
.44
.139
.075
.0
.001
.002
.0
.004
.007
.002
.0
.001
.001
.019
.016
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Bcap29
Bcap29
Bcap29
Bcap29
Bcap29
Bcap29
Bcap29
Bcap29
Bcap29
C
T
T
C
T
C
C
C
C
G
A
C
G
G
T
A
A
T
G
G
A
A
G
A
C
T
G
G
A
T
T
G
T
C
T
T
A
T
G
G
A
A
A
A
A
C
A
T
A
T
C
T
A
T
T
G
A
T
C
T
T
A
T
A
G
G
T
G
A
G
C
G
C
C
A
A
T
A
T
T
A
T
T
G
A
T
C
G
G
C
  50,883,969
  50,884,417
  50,884,953
  50,885,258
  50,887,855
  50,888,560
  50,888,638
  50,889,354
  50,889,637
  50,892,004
  50,892,212
  50,892,432
  50,892,494
  50,892,548
  50,893,685
  50,895,184
  50,895,206
  50,896,025
  50,896,071
  50,896,172
  50,896,474
  50,896,974
  50,898,029
  50,898,260
  50,898,823
  50,899,065
  50,905,930
  50,906,373
  50,907,311
  50,908,310
  50,910,796
  50,910,863
  50,911,152
  50,912,662
  50,912,778
  50,912,800
  50,912,813
  50,912,872
  50,912,889
  50,913,275
  50,913,278
  50,913,385
  50,913,541
  50,914,048
  50,914,175
  50,914,187
  50,914,237
  50,914,421
  50,914,428
  50,914,960
  50,915,546
  50,915,712
  50,916,031
  50,916,476
  50,916,501
  50,916,502
  50,916,599
  50,916,624
  50,917,108
  50,917,138
  50,917,651
  50,917,791
  50,917,898
  50,918,055
  50,918,394
  50,918,532
  50,918,659
  50,919,029
  50,919,031
  50,919,038
  50,919,262
  50,919,281
  50,919,504
  50,919,513
  50,919,762
  50,920,109
  50,920,216
  50,920,758
  50,921,162
  50,921,757
  50,921,844
  50,921,871
  50,922,327
  50,922,417
  50,922,785
  50,922,792
  50,923,024
  50,923,171
  50,923,198
  50,923,275
T
C
C
T
C
T
T
T
T
A
G
T
A
A
C
G
G
G
A
A
G
G
A
C
T
C
C
A
G
G
C
C
C
T
C
C
G
C
A
A
G
C
G
C
G
T
G
C
G
G
T
C
C
C
C
A
G
C
A
C
C
G
G
G
A
A
G
A
G
A
G
A
G
T
G
G
C
G
C
C
G
A
C
T
G
G
A
A
A
G