Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 27,981 (bp)   Positions: 128
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
BBDP/Wor (RGD) 
.005
.0
.0
.0
.0
.0
.001
.748
.0
.001
.006
.002
.019
.106
.115
.042
.0
.001
.009
.001
.002
.02
.006
.007
.078
.005
.005
.0
.001
.002
.0
.0
.0
.001
.048
.049
.0
.0
.006
.573
.999
.0
.001
.094
.317
.001
.0
.052
.002
.071
.001
.018
.004
--
--
--
--
--
--
--
--
--
--
--
--
--
.012
.434
.001
.0
.003
.0
.03
.002
.004
.001
.0
.0
.0
.041
.026
.109
.072
.168
.033
.03
.001
.001
.665
.0
.005
.001
.0
--
--
.025
.073
.062
.016
.147
.012
.019
.012
.001
.0
.0
.194
.067
.002
.002
.001
.015
.019
.052
.155
.188
.0
.005
.011
--
.001
.41
.0
.0
.005
.006
.002
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
Atp6ap1l
A
T
G
A
A
G
G
G
A
G
G
A
C
T
A
A
T
G
C
C
A
C
G
C
G
C
A
T
G
A
A
T
T
T
A
T
T
A
G
C
A
A
T
A
C
A
A
G
G
A
C
T
A
A
A
T
C
A
G
C
T
G
A
C
C
C
C
A
A
G
G
C
G
A
T
G
G
C
A
A
G
G
G
A
G
A
C
T
T
T
C
G
G
C
C
G
T
A
C
C
G
G
T
T
A
C
G
G
A
C
C
G
A
A
A
T
T
T
T
G
C
A
G
G
A
T
G
G
  19,781,446
  19,781,462
  19,781,463
  19,781,464
  19,781,584
  19,781,589
  19,781,600
  19,781,634
  19,781,871
  19,781,895
  19,782,445
  19,782,614
  19,782,624
  19,782,693
  19,782,841
  19,782,871
  19,782,889
  19,783,106
  19,783,143
  19,783,187
  19,783,190
  19,783,213
  19,783,385
  19,783,398
  19,783,624
  19,783,672
  19,783,777
  19,783,792
  19,783,861
  19,783,864
  19,783,907
  19,783,961
  19,784,029
  19,784,192
  19,784,224
  19,784,312
  19,784,423
  19,784,428
  19,784,436
  19,784,729
  19,784,878
  19,785,340
  19,785,495
  19,785,767
  19,786,344
  19,786,573
  19,786,936
  19,787,403
  19,787,487
  19,787,553
  19,787,566
  19,787,940
  19,788,232
  19,788,660
  19,788,663
  19,788,909
  19,788,944
  19,789,564
  19,789,631
  19,789,788
  19,789,990
  19,790,018
  19,790,846
  19,790,866
  19,791,453
  19,792,639
  19,795,145
  19,795,316
  19,796,004
  19,796,183
  19,797,218
  19,797,228
  19,797,335
  19,797,393
  19,799,368
  19,799,472
  19,799,537
  19,799,975
  19,800,475
  19,801,067
  19,801,206
  19,801,289
  19,801,304
  19,801,682
  19,801,705
  19,802,003
  19,802,265
  19,802,795
  19,803,150
  19,803,271
  19,803,376
  19,803,403
  19,803,418
  19,803,634
  19,803,638
  19,803,844
  19,803,854
  19,803,939
  19,803,983
  19,804,048
  19,804,088
  19,804,547
  19,804,746
  19,805,415
  19,805,527
  19,805,811
  19,805,886
  19,805,897
  19,805,920
  19,805,993
  19,806,054
  19,806,075
  19,806,530
  19,806,534
  19,806,551
  19,806,687
  19,806,735
  19,807,014
  19,807,293
  19,807,627
  19,807,839
  19,808,131
  19,808,345
  19,808,409
  19,808,419
  19,808,572
  19,808,586
  19,809,100
C
C
A
G
G
C
A
A
G
A
A
C
T
C
G
T
C
C
G
T
T
T
C
T
T
T
G
C
A
G
G
C
C
C
G
C
C
T
A
T
T
C
C
G
T
G
C
C
A
G
T
C
T
T
G
C
A
G
A
T
C
A
G
T
T
T
G
G
C
A
A
T
A
G
C
T
A
T
G
G
C
A
C
T
A
G
T
C
C
C
G
A
A
A
A
A
C
G
T
T
A
A
C
C
G
A
A
A
G
T
T
A
T
T
G
C
C
A
A
A
T
C
A
A
G
C
A
T