Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 152,295 (bp)   Positions: 91
Conservation 
Genes ( + ) 
Genes ( - ) 
Genes ( - ) 
Rnor 6.0  
BN/SsN (2020) 
.018
.014
.005
.01
.044
.003
.135
.079
.003
--
--
--
--
--
--
--
--
--
--
--
--
.528
.162
.01
.303
.628
.029
.004
.001
.0
.008
.004
.004
.018
.003
.0
.004
.0
.137
.002
.007
.088
.005
.004
.047
.052
.153
.606
.567
.55
.159
.023
.057
.371
.589
.981
.585
.544
.374
.89
.014
.006
.004
.971
1.0
1.0
.997
.171
.013
.01
.013
.004
.015
.004
.002
.0
.004
.052
.002
.003
.936
.002
.044
.035
.019
.07
.075
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Atad1
Atad1
Atad1
Atad1
Atad1
Atad1
Atad1
Atad1
Atad1
Atad1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
G
G
G
G
T
T
-
-
G
C
G
T
G
-
G
G
2
G
2
G
C
T
T
G
T
G
A
G
C
T
C
A
A
T
A
A
C
T
G
G
A
G
C
G
C
T
A
A
C
G
T
C
C
A
C
A
A
G
2
C
A
-
T
G
A
G
C
-
A
C
A
C
T
T
C
A
C
A
T
-
A
A
-
-
-
-
A
-
G
C
  251,255,839
  251,255,840
  251,255,873
  251,255,874
  251,255,884
  251,259,842
  251,260,711
  251,263,703
  251,288,940
  251,299,829
  251,299,834
  251,299,928
  251,300,222
  251,300,227
  251,300,472
  251,310,194
  251,310,204
  251,310,219
  251,311,709
  251,311,723
  251,311,891
  251,331,177
  251,331,194
  251,331,235
  251,331,258
  251,331,288
  251,331,312
  251,331,317
  251,331,340
  251,331,343
  251,331,507
  251,331,526
  251,331,527
  251,331,557
  251,331,565
  251,331,576
  251,331,580
  251,331,587
  251,331,598
  251,331,614
  251,331,716
  251,331,720
  251,331,769
  251,331,823
  251,331,829
  251,332,506
  251,332,517
  251,332,569
  251,332,570
  251,332,571
  251,332,903
  251,332,938
  251,332,940
  251,332,956
  251,332,957
  251,332,964
  251,332,991
  251,332,999
  251,333,016
  251,333,379
  251,362,053
  251,362,193
  251,371,457
  251,371,880
  251,371,899
  251,371,901
  251,371,927
  251,371,951
  251,371,969
  251,371,984
  251,371,988
  251,371,998
  251,371,999
  251,372,023
  251,372,033
  251,372,179
  251,372,181
  251,372,193
  251,372,265
  251,372,273
  251,372,295
  251,372,318
  251,372,352
  251,372,368
  251,373,749
  251,373,754
  251,373,755
  251,384,956
  251,385,189
  251,385,312
  251,386,047
T/C
G/A
G/A
G/A
G/A
C
-
12
78
-
-
A
T/C
G/A
32
-
-
-
-
-
-
T
A
C
A
C
A
G
A
A
A
T
G
T
C
T
G
T
-
A
A
G
C
T
A
T
C
G
T
T
A
G
-
T
G
T
G
C
T
-
T
C
24
A
T
G
-
-
C
-
-
C
A
-
-
-
-
-
-
-
A
-
-
T
4/G
2
29
C
T
T
C/T