Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 54,583 (bp)   Positions: 187
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
F344/NRrrc (MCW) 
.676
.007
.009
.206
.038
.0
.023
.018
.029
.001
--
--
.006
.053
.008
.002
.784
.038
.186
.02
.129
.007
.001
.013
.0
.004
.001
.001
.002
.171
.0
.001
.0
.02
.001
.0
.005
.0
.003
.0
.007
.0
.0
--
.009
.013
.002
.057
.002
.004
.044
.001
.067
.003
.005
.001
.006
.0
.0
.354
.352
.002
.058
.004
.008
.358
.096
.033
.027
.0
.0
.001
.0
.0
.0
.0
.005
.001
.107
.001
.001
.186
.997
.0
.004
.0
.0
.001
.0
.0
.022
.015
.09
.01
.048
.012
.011
.04
.831
.001
.0
.002
.0
.0
.0
.001
.001
.001
.959
.046
.0
.014
.005
.0
.001
.002
.006
.007
.008
.005
.048
.106
.031
.004
.182
.089
.044
.994
.976
.675
.117
.003
.006
.0
.019
.001
.001
.012
.0
.004
.004
.001
.002
.001
.009
.0
.01
.008
.017
.003
.003
.0
.0
.07
.006
.099
.073
.011
.003
.028
.004
.115
.175
.024
.0
.0
.0
.001
.002
--
--
.027
.0
.0
.005
.019
.022
.001
.009
.006
.0
.001
.037
.002
.001
.001
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
Anxa3
G
T
C
A
G
A
T
T
A
A
A
T
A
A
T
G
T
G
C
C
T
A
G
C
G
G
A
C
C
A
C
T
C
C
G
A
C
G
A
A
G
A
A
A
G
C
G
G
A
T
C
G
T
C
C
T
A
C
T
C
T
T
G
T
G
C
A
A
T
A
C
G
T
C
C
T
T
G
G
A
T
C
C
G
G
G
A
T
C
C
C
C
G
C
T
G
T
T
T
T
A
G
A
G
C
T
A
T
G
A
A
A
C
T
C
T
A
A
A
T
C
C
G
A
T
A
T
A
A
C
A
G
C
C
A
C
T
G
C
G
T
G
C
A
T
G
A
C
G
T
A
G
C
G
G
G
T
T
T
C
G
T
G
T
C
T
A
A
G
T
A
C
T
G
G
A
T
G
G
T
C
T
C
C
G
G
T
  14,372,325
  14,373,217
  14,373,572
  14,373,632
  14,374,089
  14,374,668
  14,375,391
  14,375,405
  14,375,596
  14,375,739
  14,375,921
  14,375,944
  14,376,639
  14,376,668
  14,376,682
  14,376,708
  14,376,850
  14,377,012
  14,377,907
  14,378,098
  14,378,211
  14,378,248
  14,378,274
  14,378,357
  14,378,817
  14,379,153
  14,379,377
  14,379,633
  14,379,802
  14,380,279
  14,380,477
  14,380,530
  14,383,859
  14,384,484
  14,384,553
  14,385,009
  14,385,022
  14,385,045
  14,386,364
  14,390,505
  14,391,366
  14,391,408
  14,391,413
  14,392,114
  14,392,176
  14,392,281
  14,392,719
  14,392,890
  14,393,025
  14,393,379
  14,393,662
  14,393,813
  14,393,978
  14,393,989
  14,394,035
  14,394,042
  14,394,071
  14,394,194
  14,394,248
  14,394,714
  14,394,715
  14,395,382
  14,395,717
  14,396,005
  14,396,006
  14,396,359
  14,396,518
  14,396,770
  14,396,782
  14,398,187
  14,398,458
  14,398,466
  14,398,519
  14,398,691
  14,398,740
  14,398,828
  14,398,882
  14,399,124
  14,399,245
  14,399,612
  14,401,158
  14,401,706
  14,402,576
  14,403,155
  14,403,364
  14,403,638
  14,404,768
  14,404,896
  14,405,095
  14,405,207
  14,405,570
  14,406,512
  14,406,528
  14,406,604
  14,406,648
  14,407,509
  14,407,590
  14,407,679
  14,407,753
  14,409,062
  14,410,822
  14,410,996
  14,411,094
  14,411,423
  14,411,473
  14,411,767
  14,411,854
  14,411,903
  14,412,367
  14,412,661
  14,413,373
  14,414,269
  14,414,536
  14,415,550
  14,416,559
  14,416,626
  14,416,939
  14,417,021
  14,417,085
  14,417,449
  14,417,500
  14,418,407
  14,418,740
  14,419,341
  14,419,468
  14,419,760
  14,420,403
  14,420,500
  14,420,681
  14,420,756
  14,420,784
  14,420,824
  14,420,832
  14,420,863
  14,420,873
  14,420,943
  14,420,996
  14,421,548
  14,421,594
  14,421,844
  14,421,859
  14,421,869
  14,422,216
  14,422,404
  14,422,415
  14,422,421
  14,422,517
  14,422,526
  14,422,576
  14,422,626
  14,422,668
  14,422,674
  14,422,759
  14,422,908
  14,423,070
  14,423,445
  14,423,469
  14,423,501
  14,423,519
  14,423,542
  14,423,629
  14,423,698
  14,423,711
  14,424,005
  14,424,126
  14,424,212
  14,424,215
  14,424,266
  14,424,363
  14,424,392
  14,424,532
  14,424,770
  14,425,287
  14,425,305
  14,425,369
  14,425,465
  14,425,466
  14,425,557
  14,425,589
  14,425,591
  14,425,625
  14,425,626
  14,425,684
  14,425,945
  14,425,977
  14,426,291
  14,426,354
A
G
T
G
A
G
C
C
G
C
G
C
G
G
G
A
G
C
T
T
C
C
A
C/T
T
A
G
G
T
G
T
G
T
T
T
G
T
A
T
G
A
G
G
A/G
A
A
C
A
G
C
T
A
A
A
A
C
G
T
C
T
A
C
T
C
A
T
G
G
A
T
T
A
C
A
T
C
C
A
C
C
C
T
T
A
G/A
A
G
C
T
T
T
T
A
T
C
A
A
C
C
C
T
T
C
A
T
C
G
C
A
G
G
G
T
C
G
C
A/G
C
G
C
T
C/T
T
G
C
G
A
A/C
C
T
G
A
T
T
C
T
C
T
T
A
C
A
T
G
C
A
G
T
A
C
G
C
T
A
A
A
C
C
C
T
A
C
C
G
T
C
G
T
A
T/C
C
T
C
C
A
A/C
T/C
T
A
C
C/A
A
T
A
A
A
C