Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 100,767 (bp)   Positions: 113
Conservation 
Genes ( + ) 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
WKY/NHsd (RGD) 
.003
.0
.005
.327
.193
.063
--
.122
.29
.986
.997
1.0
.998
1.0
.212
.055
.001
.111
.038
.003
.051
.836
.021
.152
.009
.081
.001
.82
.824
.006
.043
.0
.004
.006
.003
.076
.031
.009
.004
.001
.4
.002
.309
.091
.0
.001
.0
.014
.0
.0
.023
.353
.203
.008
.023
.003
.026
.0
.127
.006
.025
.011
.003
.066
.0
.002
.004
.062
.094
.033
--
.048
.006
.166
.01
.048
.031
.155
.002
--
--
.0
.002
.166
.009
.002
.177
--
--
.001
.003
.391
.01
.0
.091
.213
.079
.182
.0
.005
.001
.0
.001
.604
.0
.027
.001
.014
.0
.0
.016
.0
.0
Alms1
Alms1
Alms1
Alms1
Alms1
Alms1
Alms1
Alms1
Alms1
Alms1
Alms1
Alms1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
C
A
A
A
T
G
C
C
G
T
C
A
G
G
T
G
A
G
C
C
T
G
A
A
G
A
A
G
T
T
C
G
A
A
G
C
G
T
C
C
A
T
G
G
G
T
A
G
C
G
T
C
C
A
T
C
G
A
G
C
C
T
T
T
T
A
G
T
A
C
C
C
A
C
G
A
C
G
A
G
G
C
G
G
T
A
G
G
C
T
A
A
A
A
G
C
A
G
G
C
C
G
A
G
A
C
T
G
A
C
G
A
  117,371,757
  117,372,516
  117,373,891
  117,373,954
  117,375,571
  117,377,313
  117,378,272
  117,379,338
  117,379,430
  117,379,910
  117,379,928
  117,380,181
  117,380,182
  117,380,228
  117,381,162
  117,382,797
  117,383,566
  117,383,975
  117,383,980
  117,384,073
  117,385,039
  117,385,164
  117,385,488
  117,386,896
  117,388,282
  117,389,119
  117,391,271
  117,392,577
  117,392,831
  117,393,085
  117,393,222
  117,393,400
  117,393,921
  117,395,433
  117,396,441
  117,398,122
  117,398,842
  117,398,874
  117,398,979
  117,399,016
  117,400,304
  117,400,606
  117,400,884
  117,401,318
  117,403,099
  117,403,135
  117,404,458
  117,404,863
  117,406,895
  117,407,136
  117,407,599
  117,407,603
  117,407,605
  117,407,962
  117,408,296
  117,408,654
  117,409,894
  117,410,526
  117,413,934
  117,413,969
  117,413,997
  117,415,970
  117,416,723
  117,419,685
  117,419,943
  117,420,419
  117,420,728
  117,420,895
  117,421,019
  117,422,386
  117,423,282
  117,423,862
  117,424,600
  117,425,952
  117,426,114
  117,426,596
  117,426,608
  117,426,834
  117,427,665
  117,429,253
  117,429,283
  117,430,071
  117,430,411
  117,432,355
  117,432,714
  117,435,212
  117,435,800
  117,437,544
  117,440,188
  117,442,464
  117,444,756
  117,445,803
  117,448,579
  117,449,357
  117,454,639
  117,455,215
  117,456,456
  117,458,543
  117,458,939
  117,459,691
  117,460,309
  117,465,436
  117,466,719
  117,467,119
  117,467,202
  117,467,910
  117,467,971
  117,468,176
  117,470,493
  117,470,923
  117,471,099
  117,471,952
  117,471,956
G
A
G
T
G
C
C
T
T
C
C
T
G
A
A
G
T
C
A
T
T
C
A
T
C
A
G
T
A
C
C
T
A
G
G
A
T
A
C
T
A
T
A
T
T
A
C
G
A
T
G/C
T/A
C/A
T
T
C
T
A
T
A
T
G
C
A
A
C
G
A
C
G
T
T
G
G
T
A
G
T
A
G
A
C
T
A
A
C
T
C
A
T
G
C
C
G
G
A
T
T
C
T
T
T
A
G
A
C
G
C
A
G
G
A
G