Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 79,255 (bp)   Positions: 106
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
F344/NCrl (RGD) 
.952
.001
.0
.002
.249
.0
.0
.0
.0
1.0
.004
.001
.007
.0
.003
.011
.061
.002
.073
.583
.0
.001
.0
.0
.864
.0
.001
.008
.0
.001
.0
.027
.001
.413
.0
.0
.006
.206
.016
.0
.0
.0
.0
.045
.004
.001
.005
.004
.0
.0
.002
.003
.017
.355
.0
.001
.002
.075
.0
.003
.005
.001
.958
.986
.0
.051
.004
.011
.001
.001
.003
.001
.002
.049
.0
.001
.014
.0
.0
.0
.0
.011
.001
.0
.0
.0
.0
.0
.0
.0
.0
.256
.001
.0
.003
.002
.0
.008
.002
.018
.0
.803
.0
.004
.009
.001
Aldh1a2
Aldh1a2
Aldh1a2
Aldh1a2
Aldh1a2
Aldh1a2
Aldh1a2
Aldh1a2
Aldh1a2
Aldh1a2
Aldh1a2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
C
C
A
T
C
C
G
T
C
G
T
C
T
C
C
G
T
C
A
A
T
C
G
C
G
A
A
G
T
T
C
G
A
G
T
C
G
C
A
T
T
G
A
G
A
G
G
G
C
T
T
C
A
T
C
T
C
A
G
A
T
T
G
G
C
C
T
G
A
T
A
A
T
A
A
T
T
C
T
T
G
G
C
C
G
A
A
C
T
C
C
T
A
T
C
T
C
G
G
G
C
A
G
T
T
  77,642,276
  77,642,344
  77,645,200
  77,645,281
  77,645,356
  77,647,735
  77,648,738
  77,649,878
  77,651,466
  77,652,780
  77,653,354
  77,654,140
  77,655,858
  77,659,280
  77,659,575
  77,659,880
  77,659,959
  77,660,000
  77,660,024
  77,662,752
  77,662,785
  77,663,047
  77,663,237
  77,663,543
  77,666,280
  77,666,422
  77,667,107
  77,668,608
  77,668,744
  77,668,784
  77,671,884
  77,672,066
  77,672,312
  77,672,672
  77,673,293
  77,673,337
  77,674,809
  77,675,135
  77,675,177
  77,678,097
  77,678,141
  77,678,897
  77,686,964
  77,687,939
  77,687,948
  77,689,000
  77,689,590
  77,689,598
  77,689,621
  77,689,624
  77,689,681
  77,689,682
  77,690,550
  77,695,732
  77,698,160
  77,700,618
  77,700,633
  77,700,968
  77,701,385
  77,701,491
  77,701,677
  77,701,931
  77,702,082
  77,702,087
  77,702,276
  77,702,298
  77,703,044
  77,703,529
  77,704,076
  77,704,123
  77,704,438
  77,704,470
  77,704,525
  77,704,554
  77,705,806
  77,706,639
  77,706,706
  77,707,062
  77,707,153
  77,707,784
  77,707,893
  77,709,125
  77,709,259
  77,709,452
  77,709,808
  77,709,881
  77,710,249
  77,710,565
  77,711,232
  77,711,477
  77,712,442
  77,713,441
  77,714,581
  77,714,675
  77,715,166
  77,715,205
  77,715,280
  77,715,919
  77,716,507
  77,716,712
  77,716,835
  77,717,344
  77,717,483
  77,717,588
  77,718,098
  77,718,869
C
T
A
G
G
T
T
A
C
A
C
C
T
C
T
T
T
G
T
G
G
C
G
A
T
A
G
G
T
C
C
T
A
G
A
C
A
T
T
C
C
C
A
C
T
T
T
A
A
T
A
G
T
G
C
G
C
T
C
A
G
C
C
A
A
T
T
C
A
G
C
C
G
G
G
G
C
C
T
C
C
A
C
A
T
C
T
G
T
C
T
G
C
G
C
T
C
G
A
A
A
T
G
T
C
C