Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 41,478 (bp)   Positions: 101
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
COP/CrCrl (MCW & UW) 
.28
.0
.003
.025
.006
.004
.009
.338
.064
.039
.044
.025
.037
.009
.0
.001
.992
.975
.955
.436
.149
.911
.85
.886
.158
.0
.0
.0
.032
.001
.0
.0
.0
.0
.063
.005
.004
.001
.008
.024
.001
.001
.037
.0
.002
--
.004
.472
.152
.0
.001
.005
.0
.002
.023
.0
.003
.0
.0
.083
.044
.005
.001
.001
.041
.002
.02
.008
.005
.0
.0
.0
.001
.0
.0
.0
.001
.035
.003
.05
.001
.0
.006
--
.058
.025
--
--
--
--
.005
.062
.014
.0
.016
.001
.0
.007
.0
.005
.006
Agxt2
Agxt2
Agxt2
Agxt2
Agxt2
Agxt2
Agxt2
Agxt2
Agxt2
Agxt2
Agxt2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
G
C
G
A
A
G
A
G
G
G
C
A
G
T
T
G
A
A
A
A
G
A
A
A
C
G
G
G
A
G
T
C
G
A
T
G
G
G
T
G
G
G
A
T
A
C
T
G
A
G
A
T
T
T
A
C
A
T
C
T
C
T
C
G
G
C
A
T
T
G
A
T
T
G
G
T
C
C
A
A
C
G
T
T
A
G
A
A
T
C
A
T
C
A
A
C
T
C
G
G
  60,337,866
  60,338,204
  60,338,335
  60,339,003
  60,339,225
  60,339,802
  60,340,438
  60,340,601
  60,340,779
  60,340,856
  60,341,520
  60,341,872
  60,341,907
  60,342,249
  60,342,460
  60,342,711
  60,342,979
  60,342,987
  60,342,995
  60,343,011
  60,343,019
  60,343,043
  60,343,051
  60,343,055
  60,343,067
  60,343,196
  60,343,760
  60,343,826
  60,344,060
  60,344,163
  60,344,301
  60,344,547
  60,344,556
  60,344,565
  60,345,582
  60,345,906
  60,346,010
  60,346,030
  60,346,133
  60,346,446
  60,346,581
  60,346,779
  60,347,497
  60,347,524
  60,347,719
  60,350,058
  60,350,802
  60,351,108
  60,351,225
  60,352,146
  60,352,297
  60,352,941
  60,355,215
  60,355,695
  60,355,908
  60,357,486
  60,357,910
  60,357,932
  60,358,506
  60,361,072
  60,362,014
  60,362,171
  60,363,164
  60,363,316
  60,364,194
  60,364,589
  60,365,024
  60,365,126
  60,365,404
  60,365,566
  60,365,826
  60,365,990
  60,366,280
  60,366,507
  60,367,109
  60,367,196
  60,367,575
  60,367,584
  60,367,685
  60,368,236
  60,368,483
  60,368,484
  60,369,350
  60,369,524
  60,369,585
  60,369,833
  60,371,499
  60,371,804
  60,372,149
  60,372,216
  60,372,499
  60,373,867
  60,373,886
  60,374,312
  60,374,352
  60,374,935
  60,375,282
  60,375,401
  60,375,905
  60,375,997
  60,378,434
C
A
T
A
G
C
A
G
A
A
G/A
T
T
A
C
G
G/A
A/G
A/G
A/G
A/G
G/A
A/G
A/G
A/G
T
A
A
A
G
A
C
T
A
G
C
A
A
C
A
T
C
C
G
A
G
T
C
A
G
A
G
G
C
G
G
T
G
C
G
G
A
C
T
A
A
T
G
C
C
A
T
G
C
G/A
G/A
G
A
T
C
G
T
G/A
G
C
T
A
A/G
G
C
A
G
C
A
T
C
T
G
T
A
A