Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_6.0
   

Chromosome Start Position Stop Position
Region Size: 122,443 (bp)   Positions: 180
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 6.0  
F344/NCrl (RGD) 
.001
.007
.002
.0
.0
.0
.002
.002
.0
.0
.476
.56
.001
.0
.0
.007
.0
.101
.27
1.0
.0
.0
.012
.013
.001
.002
.003
.025
.003
.0
.0
.957
.0
.003
.0
.007
.003
.0
--
--
--
.0
.022
.996
.034
.008
.003
.0
.002
.0
.033
.0
.0
.0
.001
.0
.001
.0
.681
.001
.0
.018
.022
.041
.0
.0
.0
.002
.0
.0
.0
.0
.0
.003
.0
.014
.172
.011
.001
.001
.0
.005
.044
.811
.087
.0
.0
.008
.0
.0
.001
.0
.0
.0
.003
.012
.015
.02
.001
.15
.0
.0
.002
.003
.001
.996
.0
.0
.002
.003
.001
.0
.0
.002
.0
.0
.0
.164
.0
.001
.014
.001
.0
.002
.02
.08
.02
.018
.0
.057
.005
.0
.0
.0
.0
.001
.003
.018
.001
.001
.001
.001
.002
.001
.0
.001
.001
.03
.038
.001
.0
.0
.053
.001
.007
.01
.0
.047
.096
.001
--
.113
.959
.019
.002
.0
.001
.001
.001
.002
.008
.052
.002
.001
.001
.012
.004
--
.966
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
Abcc9
A
T
G
G
G
A
A
A
T
T
G
A
C
C
A
T
C
G
A
G
G
A
G
A
G
G
C
A
C
C
T
T
G
T
T
T
A
T
T
G
A
A
A
G
A
T
A
A
T
C
G
C
G
G
T
G
G
C
C
C
C
C
C
G
C
T
C
A
C
T
A
C
A
C
G
G
A
A
G
G
A
A
G
T
G
G
G
G
T
T
C
C
C
A
A
C
G
T
C
A
A
G
A
G
G
G
A
G
G
T
G
T
T
C
T
C
G
G
A
A
A
C
G
G
T
G
A
G
T
C
A
A
C
G
T
C
G
T
G
G
A
G
G
C
A
G
G
A
A
G
A
A
T
A
A
C
G
C
C
T
C
T
G
A
A
C
C
C
C
G
A
T
C
T
G
C
A
G
C
T
  176,806,459
  176,806,513
  176,806,589
  176,806,624
  176,806,909
  176,806,957
  176,807,507
  176,807,514
  176,807,743
  176,809,628
  176,809,651
  176,809,912
  176,810,081
  176,810,116
  176,810,167
  176,810,670
  176,810,800
  176,810,862
  176,810,882
  176,811,200
  176,811,379
  176,811,473
  176,811,679
  176,812,602
  176,812,993
  176,813,082
  176,813,266
  176,813,494
  176,813,934
  176,814,441
  176,815,126
  176,815,764
  176,816,535
  176,816,847
  176,817,009
  176,817,424
  176,817,507
  176,817,561
  176,818,029
  176,818,067
  176,818,191
  176,818,294
  176,818,479
  176,818,993
  176,819,017
  176,819,294
  176,819,484
  176,819,885
  176,819,950
  176,820,195
  176,820,359
  176,820,399
  176,821,573
  176,821,689
  176,821,758
  176,821,771
  176,822,443
  176,822,452
  176,822,776
  176,823,001
  176,823,100
  176,823,151
  176,823,382
  176,823,409
  176,823,642
  176,823,674
  176,823,800
  176,823,851
  176,823,886
  176,824,041
  176,824,219
  176,824,285
  176,824,289
  176,824,336
  176,824,475
  176,824,729
  176,824,945
  176,824,983
  176,824,988
  176,825,099
  176,825,182
  176,825,257
  176,825,933
  176,826,463
  176,826,523
  176,826,814
  176,826,835
  176,826,909
  176,827,245
  176,827,350
  176,827,670
  176,827,709
  176,828,312
  176,828,313
  176,828,714
  176,829,500
  176,829,568
  176,830,485
  176,831,155
  176,831,744
  176,832,023
  176,832,153
  176,832,348
  176,832,538
  176,832,552
  176,832,594
  176,833,286
  176,833,352
  176,833,587
  176,833,602
  176,833,825
  176,834,133
  176,834,384
  176,834,857
  176,835,003
  176,835,396
  176,835,654
  176,835,806
  176,835,874
  176,835,978
  176,835,980
  176,836,135
  176,836,220
  176,836,341
  176,836,367
  176,836,950
  176,837,469
  176,837,546
  176,841,102
  176,841,600
  176,842,067
  176,842,471
  176,842,472
  176,843,376
  176,843,449
  176,843,471
  176,843,574
  176,846,086
  176,846,299
  176,846,667
  176,846,670
  176,846,671
  176,846,674
  176,846,675
  176,846,676
  176,846,678
  176,846,679
  176,846,686
  176,846,688
  176,849,021
  176,851,222
  176,851,323
  176,858,152
  176,858,380
  176,858,442
  176,858,631
  176,859,593
  176,860,935
  176,864,384
  176,864,550
  176,865,536
  176,866,345
  176,867,867
  176,868,513
  176,868,871
  176,869,192
  176,869,414
  176,869,440
  176,870,280
  176,874,841
  176,874,844
  176,880,330
  176,880,337
  176,885,570
  176,885,571
  176,885,596
  176,893,221
  176,901,102
  176,906,498
  176,906,681
T
C
C
A
A
T
G
C
A
C
T
G
T
T
G
C
A
A
C
A
A
G
A
G
C
A
T
G
T
T
C
C
A
C
C
C
G
C
C
A
T
C
T
A
G
C
G
T
C
T
A
T
A
A
C
A
A
A
A
T
A
T
T
A
T
A
T
T
T
C
C
T
G
T
T
A
G
G
A
A
G
G
T
C
A
A
T
T
C
C
T
T
T
G
G
T
C
C
A
G
T
A
G
A
A
T
G
A
T
C
A
C
C
T
C
T
A
A
G
C
T
T
A
A
C
A
G
A
C
T
C
G
T
A
C
T
A
G
A
A
T
T
T
T
T
T
T
T
T
A
G
G
C
G
G
G
A
T
T
C
T
C
C
C
C
T
T
T
T
C
C
C
G
G
T
T
A/G
T
G
C