chr start stop reference nuc variant nuc depth genic status zygosity variant ID 9 46962384 46962385 C T 12 INTERGENIC homozygous 52199391 9 46962623 46962624 T C 4 INTERGENIC homozygous 52199395 9 46962938 46962939 T C 17 INTERGENIC homozygous 52199397 9 46964705 46964706 A T 2 INTERGENIC homozygous 52199405 9 46966241 46966242 G T 10 GENIC homozygous 53309436 9 46963373 46963374 G A 15 INTERGENIC possibly homozygous 53309429 9 46963937 46963938 A G 12 INTERGENIC possibly homozygous 53309431 9 46965209 46965210 T C 1 INTERGENIC homozygous 53309432 9 46965217 46965218 T C 2 INTERGENIC homozygous 53309434 9 46966427 46966428 A G 14 GENIC homozygous 52199418 9 46967146 46967147 A G 15 GENIC homozygous 52199420 9 46967323 46967324 C A 4 GENIC homozygous 53309437 9 46967326 46967327 T A 3 GENIC homozygous 52199422 9 46967708 46967709 C T 17 GENIC homozygous 53309439 9 46967717 46967718 C T 12 GENIC homozygous 52199426 9 46968056 46968057 C G 15 GENIC possibly homozygous 53309441 9 46968305 46968306 A G 16 GENIC homozygous 52199428 9 46969300 46969301 T A 12 GENIC possibly homozygous 52199436 9 46969399 46969400 T A 16 GENIC homozygous 52471604 9 46969959 46969960 G A 13 GENIC possibly homozygous 52199440 9 46971310 46971311 G A 13 GENIC homozygous 53309442 9 46971589 46971590 C T 18 GENIC homozygous 53309444 9 46972013 46972014 C G 15 GENIC homozygous 53309446 9 46975406 46975407 T C 16 GENIC possibly homozygous 52471611 9 46976561 46976562 G A 10 GENIC possibly homozygous 52853261 9 46976938 46976939 T C 11 GENIC possibly homozygous 52471612 9 46977994 46977995 A C 7 GENIC homozygous 52199479 9 46978438 46978439 A T 14 GENIC possibly homozygous 52853263 9 46979174 46979175 T A 11 GENIC possibly homozygous 52853267 9 46979596 46979597 A G 4 GENIC heterozygous 52199483 9 46980549 46980550 G A 18 GENIC possibly homozygous 52199485 9 46980613 46980614 C T 12 GENIC heterozygous 52199487 9 46980667 46980668 G A 20 GENIC homozygous 52199489 9 46980869 46980870 G T 13 GENIC homozygous 52199491 9 46980906 46980907 T C 12 GENIC homozygous 52853269 9 46981336 46981337 T G 15 GENIC homozygous 52199497 9 46981483 46981484 G A 7 GENIC possibly homozygous 52853271 9 46982014 46982015 A - 6 GENIC heterozygous 52199505 9 46982287 46982288 A G 8 GENIC homozygous 52199513 9 46982337 46982338 C T 19 GENIC possibly homozygous 52199514 9 46982774 46982775 A G 20 GENIC homozygous 52853273 9 46982880 46982881 G A 11 GENIC heterozygous 52853275 9 46982971 46982972 G C 17 GENIC homozygous 52199518 9 46983228 46983229 G A 21 GENIC possibly homozygous 52199522 9 46983373 46983374 A G 15 GENIC possibly homozygous 52199526 9 46984024 46984025 C T 10 GENIC homozygous 52199532 9 46984626 46984627 T A 13 GENIC homozygous 52199536 9 46984813 46984814 G C 12 GENIC homozygous 52199540 9 46984922 46984923 G A 8 GENIC possibly homozygous 52199542 9 46984932 46984933 A G 9 GENIC homozygous 52199544 9 46985070 46985071 G A 18 GENIC homozygous 52199545 9 46985611 46985612 T A 13 GENIC homozygous 52199547 9 46986164 46986165 G A 6 GENIC homozygous 52199553 9 46986189 46986190 C T 6 GENIC homozygous 52853277 9 46986410 46986411 T G 16 GENIC homozygous 52853279 9 46986539 46986540 A G 14 GENIC homozygous 52199557 9 46987090 46987091 T G 4 GENIC homozygous 52853289 9 46987014 46987015 C T 12 GENIC possibly homozygous 52853281 9 46987059 46987060 G A 8 GENIC homozygous 52853283 9 46987079 46987080 C T 3 GENIC homozygous 52853285 9 46987080 46987081 T G 3 GENIC homozygous 52853287 9 46987114 46987115 A G 3 GENIC homozygous 52853291 9 46987138 46987139 A AAT 1 GENIC homozygous 52853293 9 46987346 46987347 T G 18 GENIC homozygous 52853298 9 46987392 46987393 G A 11 GENIC heterozygous 52853300 9 46987565 46987566 C T 2 GENIC homozygous 53309447 9 46987571 46987572 T C 2 GENIC homozygous 52199561 9 46987575 46987576 G A 2 GENIC homozygous 52199563 9 46987758 46987759 G A 15 GENIC homozygous 52853302 9 46987875 46987876 A G 11 GENIC possibly homozygous 52471623 9 46987954 46987955 T C 7 GENIC possibly homozygous 52199568 9 46988828 46988829 G T 9 GENIC homozygous 52199572 9 46988838 46988839 C T 13 GENIC homozygous 52199574 9 46988949 46988950 T G 7 GENIC homozygous 52199576 9 46989178 46989179 A G 21 GENIC homozygous 52199578 9 46990165 46990166 T C 1 GENIC homozygous 51936128 9 46990166 46990167 C T 1 GENIC homozygous 52853304 9 46990252 46990253 T C 3 GENIC homozygous 51936131 9 46990254 46990255 T C 3 GENIC homozygous 51936134 9 46990258 46990259 T C 2 GENIC homozygous 51936137 9 46990261 46990262 T C 2 GENIC homozygous 51936140 9 46990278 46990279 G C 2 GENIC homozygous 51936143 9 46990395 46990396 C A 3 GENIC heterozygous 53309449 9 46991165 46991166 A G 8 GENIC possibly homozygous 52199582 9 46991197 46991198 C T 6 GENIC homozygous 52199584 9 46991305 46991323 TGTGTGTGTGTGTGTGTG ------------------ 1 GENIC homozygous 53309451 9 46991591 46991592 T - 4 GENIC homozygous 51936146 9 46991604 46991605 T A 8 GENIC homozygous 51936149 9 46991695 46991696 C G 12 GENIC heterozygous 51936152 9 46991699 46991700 A G 11 GENIC heterozygous 52199586 9 46992342 46992343 T C 14 GENIC possibly homozygous 52199588 9 46992802 46992803 A G 16 GENIC possibly homozygous 52199594 9 46993722 46993723 T C 16 GENIC homozygous 52199596 9 46994232 46994233 C CAT 6 GENIC homozygous 52199598 9 46994254 46994255 C T 9 GENIC homozygous 52199600 9 46994829 46994830 T A 20 GENIC homozygous 52199604 9 46994927 46994928 A C 13 GENIC homozygous 52199606 9 46995101 46995102 A G 12 GENIC homozygous 52199608 9 46995166 46995167 C T 6 GENIC homozygous 52853308 9 46995199 46995200 G A 15 GENIC homozygous 52199610 9 46995242 46995243 G A 9 GENIC homozygous 52199612 9 46995875 46995876 T C 4 GENIC homozygous 52199614 9 46995877 46995878 C G 4 GENIC homozygous 52199616 9 46995912 46995913 A G 12 GENIC heterozygous 52199620 9 46995981 46995982 T C 6 GENIC homozygous 52199622 9 46996070 46996071 G A 20 GENIC possibly homozygous 52199624 9 46996413 46996414 T C 3 GENIC homozygous 52199626 9 46997030 46997031 A C 10 GENIC homozygous 52199628 9 46997230 46997231 T - 6 GENIC heterozygous 53309452 9 46997297 46997298 A G 9 GENIC homozygous 53309454 9 46997353 46997354 C A 8 GENIC possibly homozygous 52199630 9 46997412 46997413 G A 6 GENIC homozygous 52199632 9 46997421 46997422 C A 2 GENIC homozygous 51936155 9 46997602 46997603 A - 6 GENIC homozygous 51936188 9 46998746 46998747 A G 18 GENIC homozygous 52199644 9 46998801 46998802 G A 17 GENIC homozygous 52199646 9 46999001 46999002 A G 13 GENIC homozygous 52199648 9 46999511 46999512 A G 14 GENIC homozygous 52199652 9 46999575 46999576 G A 10 GENIC homozygous 52199654 9 46999598 46999599 A G 3 GENIC heterozygous 52199656 9 46999764 46999765 G T 16 GENIC possibly homozygous 52199658 9 46999929 46999930 T C 7 GENIC homozygous 52199662 9 46999938 46999939 A T 11 GENIC homozygous 52199664 9 47000109 47000110 G A 11 GENIC possibly homozygous 53309456 9 47000142 47000143 T G 5 GENIC homozygous 52199666 9 47000298 47000299 G A 15 GENIC homozygous 52199668 9 47000397 47000398 C T 5 GENIC homozygous 52199670 9 47000413 47000414 A G 5 GENIC homozygous 52199672 9 47000831 47000832 C T 21 GENIC homozygous 52199674 9 47001073 47001074 A T 9 GENIC heterozygous 52199676 9 47001085 47001086 G C 12 GENIC possibly homozygous 52199678 9 47001194 47001195 G A 20 GENIC homozygous 52199680 9 47001263 47001264 A G 17 GENIC possibly homozygous 52199684 9 47001367 47001368 G A 8 GENIC homozygous 52199686 9 47001374 47001375 A G 6 GENIC homozygous 52199688 9 47001486 47001487 A G 9 GENIC heterozygous 52199690 9 47001668 47001669 G GA 2 GENIC homozygous 52199692 9 47001689 47001690 T C 4 GENIC homozygous 52199694 9 47001753 47001754 C G 8 GENIC homozygous 53309457 9 47002374 47002375 C T 14 GENIC homozygous 52199700 9 47002530 47002531 C T 8 GENIC possibly homozygous 52199704 9 47002531 47002532 A T 9 GENIC possibly homozygous 52199706 9 47002805 47002806 T C 13 GENIC homozygous 52199708 9 47002837 47002838 T C 14 GENIC possibly homozygous 52199710 9 47002926 47002927 A C 18 GENIC possibly homozygous 52199712 9 47003162 47003163 A G 8 GENIC possibly homozygous 52199714 9 47003279 47003280 G A 8 GENIC homozygous 53309459 9 47003287 47003288 T C 6 GENIC homozygous 52199716 9 47003297 47003298 A G 7 GENIC homozygous 52199718 9 47003443 47003444 C - 15 GENIC possibly homozygous 52199720 9 47003615 47003616 G A 13 GENIC homozygous 52199722 9 47003684 47003685 T A 10 GENIC possibly homozygous 52199724 9 47003797 47003798 C T 11 GENIC homozygous 52199726 9 47004140 47004141 A - 10 GENIC homozygous 52199728 9 47004219 47004220 C G 11 GENIC homozygous 52199730 9 47004962 47004963 A G 15 GENIC homozygous 52199734 9 47005014 47005015 A G 6 GENIC heterozygous 52199738 9 47005095 47005096 T G 11 GENIC possibly homozygous 52199740 9 47005127 47005128 G A 10 GENIC homozygous 52199744 9 47005246 47005247 T C 8 GENIC homozygous 52199746 9 47005403 47005404 A G 13 GENIC homozygous 52199750 9 47005493 47005494 T G 10 GENIC homozygous 52199752 9 47005565 47005566 T A 12 GENIC homozygous 52199754 9 47005990 47005991 T C 9 GENIC homozygous 52199758 9 47006036 47006037 C T 11 GENIC possibly homozygous 52199760 9 47006570 47006571 C T 6 GENIC homozygous 52199770 9 47007421 47007422 C T 13 GENIC heterozygous 52199784 9 47006637 47006638 T C 8 GENIC homozygous 52199772 9 47006755 47006756 T C 14 GENIC possibly homozygous 52199776 9 47006813 47006814 C T 5 GENIC homozygous 52199778 9 47006872 47006873 C G 2 GENIC homozygous 52199780 9 47006883 47006884 A G 8 GENIC homozygous 52199782 9 47007635 47007636 A G 1 GENIC homozygous 52199786 9 47007649 47007650 G A 3 GENIC homozygous 53309461 9 47007955 47007956 T - 4 GENIC homozygous 52199790 9 47007961 47007962 T C 4 GENIC homozygous 52199792 9 47007966 47007967 T C 4 GENIC homozygous 52199794 9 47007975 47007976 G A 9 GENIC possibly homozygous 52199796 9 47008019 47008020 G T 19 GENIC homozygous 52199798 9 47008287 47008288 G A 16 GENIC homozygous 52199800 9 47008459 47008460 C T 18 GENIC possibly homozygous 53309462 9 47009163 47009164 T C 16 GENIC homozygous 52199802 9 47009515 47009516 A G 20 GENIC homozygous 52199804 9 47010505 47010506 T C 7 GENIC homozygous 52199808 9 47010709 47010710 T C 5 GENIC homozygous 52199812 9 47011324 47011325 G A 14 GENIC possibly homozygous 52199814 9 47011785 47011786 A G 13 GENIC homozygous 52199816 9 47012446 47012447 T C 22 GENIC homozygous 52199818 9 47012573 47012574 C T 24 GENIC possibly homozygous 52199820 9 47012643 47012644 G A 11 GENIC homozygous 52199822 9 47012788 47012792 TAAT ---- 9 GENIC homozygous 52199824 9 47012859 47012860 T - 14 GENIC homozygous 52199826 9 47012891 47012892 C T 13 GENIC homozygous 52199828 9 47013383 47013388 TAGAG ----- 3 GENIC homozygous 52199832 9 47013655 47013656 T TG 9 GENIC homozygous 52199834 9 47013788 47013789 G C 4 GENIC homozygous 52199836 9 47013903 47013904 A G 12 GENIC homozygous 52199838 9 47013984 47013985 A C 12 GENIC possibly homozygous 52199840 9 47014508 47014514 GCGTGC ------ 8 GENIC possibly homozygous 53309464 9 47015532 47015533 T C 14 GENIC homozygous 52199854 9 47015901 47015902 T G 10 GENIC homozygous 52199856 9 47015932 47015933 A G 6 GENIC heterozygous 52199858 9 47015994 47015995 G A 11 GENIC homozygous 52199860 9 47016094 47016095 A G 22 GENIC possibly homozygous 52199862 9 47016614 47016615 C T 8 GENIC heterozygous 52853320 9 47016134 47016135 C T 10 GENIC possibly homozygous 52199864 9 47016171 47016172 T C 5 GENIC homozygous 52199866 9 47016287 47016288 G A 16 GENIC possibly homozygous 52199868 9 47016613 47016614 T C 8 GENIC heterozygous 52199870 9 47016683 47016684 A G 11 GENIC homozygous 52199872 9 47016806 47016807 C T 13 GENIC possibly homozygous 52199874 9 47016964 47016965 G A 12 GENIC homozygous 52199876 9 47017043 47017044 G C 3 GENIC heterozygous 52471631 9 47017088 47017125 GTCCCACAGTCCTTTGCTCCATAGGAAATAGCTCATC ------------------------------------- 2 GENIC homozygous 52853322 9 47017526 47017527 A - 3 GENIC heterozygous 52853324 9 47017728 47017729 T C 9 GENIC homozygous 52199882 9 47017884 47017885 T G 11 GENIC homozygous 52199883 9 47018061 47018062 A G 11 GENIC possibly homozygous 52199885 9 47018127 47018128 G A 10 GENIC homozygous 52199887 9 47018374 47018375 C T 5 INTERGENIC homozygous 52199889 9 47018442 47018447 ATAGA ----- 6 INTERGENIC heterozygous 52199891 9 47018461 47018462 A AAT 7 INTERGENIC heterozygous 53309466 9 47018475 47018476 C G 7 INTERGENIC homozygous 52199893 9 47019256 47019257 T A 1 INTERGENIC homozygous 52199901 9 47019429 47019430 A AAG 1 INTERGENIC homozygous 53038437 9 47019457 47019458 A C 3 INTERGENIC heterozygous 52199907 9 47019470 47019471 A AAAAAAAAC 5 INTERGENIC heterozygous 53309467 9 47019507 47019508 A G 5 INTERGENIC homozygous 52199911 9 47020040 47020041 C T 12 INTERGENIC homozygous 52199913 9 47020213 47020214 T A 4 INTERGENIC homozygous 52199915 9 47020828 47020829 T TAATC 6 INTERGENIC homozygous 53309469 9 47021429 47021430 G A 13 INTERGENIC homozygous 52199917 9 47021475 47021476 T C 13 INTERGENIC heterozygous 52199919 9 47022035 47022036 A AT 4 INTERGENIC heterozygous 52199923 9 47022035 47022036 A ATT 4 INTERGENIC heterozygous 53309471 9 47022347 47022348 C - 3 INTERGENIC heterozygous 52906431 9 47022981 47022982 C T 23 INTERGENIC homozygous 52199929 9 47023224 47023225 G A 7 INTERGENIC homozygous 53309472 9 47023293 47023318 GAGCTGGGGCTGGGGGCTGGGAGGA ------------------------- 6 INTERGENIC heterozygous 52853328 9 47023463 47023464 C T 10 INTERGENIC homozygous 52199933 9 47024294 47024295 T C 14 INTERGENIC homozygous 52199935 9 47024385 47024386 C G 9 INTERGENIC homozygous 52199937 9 47024479 47024480 A T 12 INTERGENIC possibly homozygous 52199939 9 47024793 47024794 T C 6 INTERGENIC homozygous 52199941 9 47024797 47024798 T C 7 INTERGENIC homozygous 52199943 9 47024807 47024808 T C 6 INTERGENIC homozygous 52199945 9 47024849 47024850 A C 19 INTERGENIC homozygous 52199947 9 47025775 47025776 C T 9 INTERGENIC homozygous 53309474 9 47025953 47025954 T C 11 INTERGENIC homozygous 52199949 9 47026323 47026324 T A 14 INTERGENIC heterozygous 51936212 9 47026324 47026325 G C 14 INTERGENIC heterozygous 51936215 9 47026450 47026451 A G 8 INTERGENIC possibly homozygous 52199953 9 47026451 47026452 G A 8 INTERGENIC possibly homozygous 52199955 9 47026922 47026923 G A 10 INTERGENIC possibly homozygous 52199957 9 47027176 47027177 T C 9 INTERGENIC homozygous 52199959 9 47027688 47027689 C T 11 INTERGENIC homozygous 52199961 9 47027731 47027732 G A 11 INTERGENIC heterozygous 52199963 9 47027928 47027929 G A 6 INTERGENIC heterozygous 53309476 9 47028007 47028008 G GA 4 INTERGENIC heterozygous 52199965 9 47028089 47028090 T C 10 INTERGENIC heterozygous 52199967 9 47028672 47028673 T A 8 INTERGENIC homozygous 52199975 9 47028791 47028792 G A 12 INTERGENIC homozygous 52199977 9 47029328 47029329 A G 19 INTERGENIC homozygous 52199979 9 47030310 47030311 A G 17 INTERGENIC homozygous 52199981 9 47030637 47030638 G A 17 INTERGENIC heterozygous 53309477 9 47031019 47031020 T C 13 INTERGENIC homozygous 52199983 9 47031344 47031345 T C 24 INTERGENIC homozygous 52199989 9 47031732 47031733 A - 6 INTERGENIC homozygous 53179140 9 47031809 47031810 G GT 8 INTERGENIC homozygous 53309479 9 47032652 47032653 G A 9 INTERGENIC homozygous 53309481 9 47032833 47032836 TTG --- 11 INTERGENIC possibly homozygous 53309482 9 47032893 47032894 G C 11 INTERGENIC homozygous 52199999 9 47033353 47033354 T TAGTC 5 INTERGENIC homozygous 52200009 9 47033392 47033393 G A 12 INTERGENIC homozygous 53309484 9 47033482 47033483 G A 14 INTERGENIC homozygous 52200011 9 47033602 47033603 G T 16 INTERGENIC homozygous 52200017 9 47034071 47034072 C CAGAAAAT 4 INTERGENIC heterozygous 53309486 9 47034143 47034144 A - 3 INTERGENIC heterozygous 52200019 9 47034159 47034160 T A 5 INTERGENIC heterozygous 52200021 9 47035168 47035169 C T 18 INTERGENIC homozygous 52200027 9 47034243 47034244 G T 7 INTERGENIC homozygous 53309487 9 47034370 47034371 A ACC 4 INTERGENIC homozygous 52200023 9 47034371 47034372 A C 4 INTERGENIC homozygous 52853334 9 47035554 47035555 T C 10 INTERGENIC homozygous 53309489 9 47035573 47035574 G T 14 INTERGENIC homozygous 53309491 9 47035837 47035838 C A 9 INTERGENIC possibly homozygous 52200031 9 47036075 47036076 A G 16 INTERGENIC homozygous 52200033 9 47036168 47036169 G A 10 INTERGENIC homozygous 52200035 9 47037135 47037136 A G 11 INTERGENIC homozygous 53309492 9 47037395 47037396 C T 10 INTERGENIC possibly homozygous 53309494 9 47037514 47037515 T C 15 INTERGENIC homozygous 53309496 9 47038103 47038104 A G 6 INTERGENIC homozygous 53309497 9 47038107 47038108 C CTCATT 3 INTERGENIC homozygous 53309499