chr start stop reference nuc variant nuc depth genic status zygosity variant ID 7 142580833 142580834 G GA 11 INTERGENIC heterozygous 54161366 7 142582065 142582073 GTGTGTGT -------- 4 INTERGENIC homozygous 55060365 7 142586083 142586084 A G 21 INTERGENIC homozygous 54161368 7 142591618 142591621 GGG --- 10 INTERGENIC possibly homozygous 54268776 7 142593093 142593094 T TAC 35 INTERGENIC homozygous 54161372 7 142593658 142593659 T A 26 INTERGENIC homozygous 54161373 7 142593803 142593804 G GAACA 20 INTERGENIC homozygous 54161374 7 142594519 142594520 G C 24 INTERGENIC homozygous 54161375 7 142597283 142597284 A G 25 INTERGENIC homozygous 54161378 7 142597797 142597798 T - 28 INTERGENIC possibly homozygous 54161379 7 142598712 142598713 A G 25 INTERGENIC homozygous 54161382 7 142600466 142600467 T TA 13 INTERGENIC homozygous 54161383 7 142606445 142606446 G A 18 GENIC homozygous 54161393 7 142607536 142607537 A T 28 GENIC homozygous 56318576 7 142604603 142604604 G GA 8 INTERGENIC heterozygous 55017661 7 142585612 142585613 G A 28 INTERGENIC homozygous 56318562 7 142586699 142586700 C T 15 INTERGENIC homozygous 56318564 7 142591757 142591758 G A 22 INTERGENIC homozygous 56318566 7 142595856 142595857 A T 28 INTERGENIC homozygous 56318568 7 142602163 142602164 A AG 24 INTERGENIC homozygous 56318570 7 142604621 142604633 GTGCTCAGCTCC ------------ 15 INTERGENIC heterozygous 56318572 7 142606224 142606225 C T 35 GENIC homozygous 56318574 7 142591215 142591216 A AACACACACACAC 9 INTERGENIC homozygous 54924731 7 142604604 142604605 G A 9 INTERGENIC homozygous 54839374 7 142610326 142610327 T C 16 GENIC homozygous 54161394 7 142615950 142615951 T C 16 GENIC homozygous 54161396 7 142615955 142615956 A C 19 GENIC homozygous 54161397 7 142616079 142616081 TT -- 21 GENIC homozygous 54161398 7 142617656 142617657 A C 19 GENIC homozygous 54161399 7 142619547 142619549 TA -- 32 GENIC homozygous 54161401 7 142622832 142622833 G GAAAAAAA 6 GENIC heterozygous 55017663 7 142622832 142622833 G GAAAAAAAAA 6 GENIC heterozygous 55017665 7 142624443 142624444 G A 29 GENIC homozygous 56318578 7 142626376 142626377 A AATAT 7 GENIC homozygous 54161404 7 142626410 142626416 ACACAC ------ 4 GENIC homozygous 55100784 7 142626449 142626451 CA -- 7 GENIC homozygous 54161406 7 142628459 142628460 A AAAG 10 GENIC homozygous 54161407 7 142631462 142631464 AA -- 13 GENIC homozygous 55060366 7 142631608 142631609 T - 17 GENIC homozygous 54161414 7 142634023 142634024 A - 25 GENIC homozygous 56265756 7 142634197 142634198 T C 21 GENIC homozygous 56318580 7 142635714 142635715 A AT 37 GENIC homozygous 54161416 7 142639125 142639126 A - 12 GENIC homozygous 54161418 7 142639203 142639204 G GATAAATAAATAA 3 GENIC homozygous 55017669 7 142639407 142639409 AA -- 10 GENIC heterozygous 54161419 7 142641332 142641333 T TA 17 GENIC homozygous 56318582 7 142642830 142642831 C CT 17 GENIC homozygous 55100796 7 142643634 142643636 GC -- 1 GENIC homozygous 56318584 7 142645242 142645243 A G 16 GENIC homozygous 54161426 7 142647065 142647066 G T 19 GENIC homozygous 54802906 7 142647504 142647505 A G 22 GENIC homozygous 54161429 7 142648329 142648330 T C 33 GENIC homozygous 54161430 7 142650533 142650534 T TA 27 GENIC homozygous 56318586 7 142651315 142651319 TTTT ---- 25 GENIC heterozygous 55100800 7 142653251 142653252 A G 30 INTERGENIC homozygous 54161434 7 142655832 142655833 A G 27 GENIC homozygous 54161435 7 142655934 142655935 T TAAAA 8 GENIC homozygous 55032343 7 142656379 142656380 C T 19 GENIC homozygous 54161438 7 142656423 142656424 A - 17 GENIC homozygous 56318588 7 142658948 142658949 A G 30 GENIC homozygous 54161439 7 142659530 142659534 AGAG ---- 4 GENIC heterozygous 56318590 7 142660720 142660721 A G 20 GENIC homozygous 54161440 7 142662451 142662452 A C 31 INTERGENIC homozygous 56318592 7 142662858 142662862 CACA ---- 4 INTERGENIC heterozygous 55017677 7 142665395 142665396 G GAACAA 22 INTERGENIC homozygous 56318594 7 142665623 142665625 AC -- 31 INTERGENIC homozygous 54161444 7 142667341 142667342 T A 12 INTERGENIC homozygous 54161445 7 142667701 142667702 T C 23 GENIC homozygous 54161447 7 142667715 142667716 A G 21 GENIC homozygous 54161448 7 142670230 142670231 C - 30 INTERGENIC homozygous 54161452 7 142670601 142670605 GTGT ---- 5 INTERGENIC heterozygous 55100808 7 142670603 142670605 GT -- 5 INTERGENIC heterozygous 55100810 7 142670642 142670643 T C 10 INTERGENIC possibly homozygous 54161456 7 142670651 142670652 A G 10 INTERGENIC possibly homozygous 54161457 7 142670863 142670864 G T 13 INTERGENIC homozygous 54161459 7 142671442 142671443 A G 18 INTERGENIC homozygous 56318596 7 142671843 142671844 A ACTCTTTTTTTTTTTTCTTCTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTG 7 INTERGENIC homozygous 55100812 7 142672298 142672299 A C 34 INTERGENIC homozygous 54161461 7 142672671 142672677 TGTGTG ------ 8 INTERGENIC heterozygous 55017685 7 142672974 142672975 A ATGTGTGTG 23 INTERGENIC homozygous 56318598 7 142673214 142673215 T C 38 INTERGENIC homozygous 54161462 7 142673619 142673620 C G 22 INTERGENIC homozygous 56318600 7 142674365 142674366 G GACACACACAC 14 INTERGENIC homozygous 54161464 7 142674816 142674817 G A 20 INTERGENIC homozygous 56318602 7 142675320 142675335 ATCATCATCATCATC --------------- 9 INTERGENIC homozygous 56292082 7 142675381 142675382 T C 17 INTERGENIC homozygous 56318604 7 142675444 142675445 G T 25 INTERGENIC homozygous 56318606 7 142675792 142675793 A G 23 INTERGENIC homozygous 56318608 7 142676374 142676375 A G 30 INTERGENIC homozygous 56318610 7 142677472 142677473 T C 29 INTERGENIC homozygous 56318612 7 142677703 142677704 T TTG 2 INTERGENIC heterozygous 55017697 7 142677709 142677710 G GCT 1 INTERGENIC homozygous 55017699 7 142677711 142677712 G GGCAAGCGCTCTACCA 1 INTERGENIC homozygous 55017701 7 142677715 142677716 G A 1 INTERGENIC homozygous 55017703 7 142677717 142677718 T C 1 INTERGENIC homozygous 55017705 7 142678212 142678213 T - 34 INTERGENIC homozygous 56318614 7 142678438 142678439 G GCC 12 INTERGENIC homozygous 56318616 7 142680667 142680668 G - 12 INTERGENIC homozygous 56318630 7 142678458 142678459 A G 17 INTERGENIC homozygous 56318618 7 142678506 142678507 G A 19 INTERGENIC homozygous 56318620 7 142679297 142679298 C A 18 INTERGENIC homozygous 56318622 7 142679476 142679477 A T 12 INTERGENIC homozygous 54161470 7 142679491 142679492 T G 9 INTERGENIC homozygous 56318624 7 142679636 142679736 CTCCTCGTCGTTCGCGAGCCCCCTGCCGGAGGTGATGAGAGTTGGGACTAAGATCTTTTTTTTTTCAGAAAACGACCGCCAAACCGCCCGCTAGTTGTTT ---------------------------------------------------------------------------------------------------- 3 INTERGENIC heterozygous 55017709 7 142680128 142680129 G A 21 INTERGENIC homozygous 56318626 7 142680186 142680187 T C 27 INTERGENIC homozygous 56318628 7 142674978 142674979 T - 3 INTERGENIC homozygous 55363614 7 142651697 142651698 A AAAAAAATAAAAATAAAAAAAAAAAGAATTC 31 GENIC heterozygous 55180755 7 142670839 142670840 T - 1 INTERGENIC homozygous 55180758 7 142667416 142667417 G GGTGTGT 6 INTERGENIC heterozygous 54758877 7 142673788 142673792 GTGT ---- 3 INTERGENIC homozygous 55961151 7 142674672 142674673 T TTCTCTC 7 INTERGENIC possibly homozygous 55281480 7 142677475 142677476 T - 30 INTERGENIC homozygous 55281482 7 142680941 142680942 C T 11 GENIC homozygous 54161479 7 142681627 142681634 TTTTTTG ------- 3 GENIC homozygous 54161481 7 142681912 142681913 G GAAAAAAAAAAAAA 8 GENIC homozygous 55100826 7 142681945 142681946 T TC 15 GENIC homozygous 54161482 7 142681955 142681956 G A 16 GENIC homozygous 54161483 7 142682072 142682073 C T 19 GENIC homozygous 54161484 7 142682250 142682251 T A 17 GENIC homozygous 54161485 7 142682268 142682269 T - 16 GENIC homozygous 54161486 7 142682427 142682428 G A 25 GENIC homozygous 54161487 7 142682438 142682439 A G 21 GENIC homozygous 54161488 7 142682703 142682704 T C 26 GENIC homozygous 54161489 7 142683053 142683054 T - 19 GENIC possibly homozygous 55180761 7 142683083 142683084 A G 31 GENIC homozygous 56318632 7 142683584 142683585 G A 23 GENIC possibly homozygous 54161490 7 142683378 142683382 ATAA ---- 4 GENIC homozygous 55883154