chr start stop reference nuc variant nuc depth genic status zygosity variant ID 7 40257248 40257249 C T 48 GENIC homozygous 53887125 7 40258179 40258180 C A 26 GENIC homozygous 53887128 7 40258948 40258949 A T 31 GENIC homozygous 53887129 7 40261314 40261315 T A 39 GENIC homozygous 53887130 7 40261655 40261656 C G 43 GENIC homozygous 53887131 7 40262573 40262574 T C 31 GENIC homozygous 53887132 7 40264242 40264243 A AT 19 GENIC possibly homozygous 53887134 7 40265208 40265209 C T 28 GENIC homozygous 53887135 7 40266721 40266725 ACAC ---- 14 GENIC homozygous 53887136 7 40266871 40266874 TTT --- 3 GENIC heterozygous 53887137 7 40267431 40267432 A G 36 GENIC homozygous 53887138 7 40268684 40268685 T C 41 GENIC homozygous 53887139 7 40269221 40269222 A - 31 GENIC homozygous 53887140 7 40269348 40269349 A G 31 GENIC homozygous 53887141 7 40269515 40269516 C T 26 GENIC homozygous 53887142 7 40269705 40269706 G A 37 GENIC homozygous 53887143 7 40271244 40271245 T C 32 GENIC homozygous 53887144 7 40272587 40272588 T C 29 GENIC homozygous 53887145 7 40272904 40272905 C CTTTTTTT 6 GENIC homozygous 53887146 7 40274111 40274112 C T 45 GENIC homozygous 53887147 7 40276302 40276303 C T 32 GENIC homozygous 53887148 7 40277308 40277309 C T 40 GENIC homozygous 53887149 7 40280257 40280258 T G 23 GENIC homozygous 53887151 7 40281226 40281227 C T 33 GENIC homozygous 53887152 7 40282913 40282914 T A 27 GENIC homozygous 53887154 7 40275311 40275312 T TTTTG 24 GENIC heterozygous 55858037 7 40275316 40275317 G GTTTCTGTTTTT 25 GENIC heterozygous 55858038 7 40281023 40281024 T G 27 GENIC homozygous 55858039 7 40285851 40285855 TATA ---- 22 GENIC homozygous 54363392 7 40283032 40283033 T TC 3 GENIC homozygous 54194256 7 40283875 40283876 T C 11 GENIC homozygous 53887168 7 40284668 40284669 T C 28 GENIC homozygous 53887170 7 40284867 40284868 G GCTA 14 GENIC possibly homozygous 55858040 7 40287324 40287325 A AGGT 27 GENIC homozygous 53887172 7 40288504 40288505 T G 32 GENIC homozygous 54363396 7 40288602 40288603 A G 28 GENIC homozygous 54363398 7 40289004 40289005 C - 19 GENIC homozygous 54363400 7 40290153 40290154 C G 33 GENIC homozygous 54363402 7 40290720 40290721 C T 25 GENIC homozygous 54363404 7 40290803 40290804 T C 30 GENIC homozygous 54363406 7 40291069 40291070 T C 27 GENIC homozygous 54363408 7 40291118 40291119 A G 32 GENIC homozygous 54363410 7 40291175 40291176 T TCAAATGATGTCCTAAAG 9 GENIC homozygous 54970819 7 40291178 40291179 T TAGAATGTCCTG 9 GENIC homozygous 54970821 7 40291190 40291191 T TCC 2 GENIC homozygous 54970823 7 40293854 40293855 A AT 31 GENIC homozygous 54363411 7 40294322 40294323 C T 41 GENIC homozygous 54363413 7 40294420 40294421 A T 35 GENIC homozygous 54363415 7 40294498 40294504 TTTTTT ------ 6 GENIC heterozygous 54970825 7 40295113 40295114 A G 24 GENIC homozygous 53887175 7 40295117 40295118 C CAA 17 GENIC heterozygous 54363419 7 40298428 40298429 C T 21 GENIC homozygous 55858041 7 40298740 40298741 G C 31 GENIC homozygous 54363421 7 40298884 40298885 G A 21 GENIC homozygous 55858042 7 40298931 40298932 C A 36 GENIC homozygous 53887179 7 40300673 40300674 A AACACACACACAC 2 GENIC homozygous 54970833 7 40300911 40300919 TCTCTCTC -------- 2 GENIC heterozygous 54970835 7 40300958 40300959 G GAGT 30 GENIC possibly homozygous 53887181 7 40301124 40301128 GTTC ---- 28 GENIC homozygous 54363423 7 40301156 40301157 A AAC 22 GENIC homozygous 53887182 7 40301320 40301321 T - 24 GENIC possibly homozygous 55858043 7 40301479 40301480 T - 16 GENIC homozygous 55858044 7 40303381 40303382 A - 20 GENIC homozygous 54363425 7 40303670 40303671 T C 26 GENIC homozygous 54363427 7 40304585 40304605 GTGTGTGTGTGTGTGTGTGT -------------------- 5 GENIC homozygous 54970837 7 40305668 40305669 T TA 21 GENIC homozygous 54363429 7 40306907 40306909 TG -- 10 GENIC heterozygous 55173820 7 40307608 40307609 G A 22 GENIC homozygous 55858045 7 40308419 40308420 A G 32 GENIC homozygous 54363433 7 40309439 40309440 G GT 33 GENIC homozygous 54363435 7 40314266 40314267 C - 4 GENIC homozygous 55858046 7 40316888 40316889 A C 29 GENIC homozygous 54363444 7 40317347 40317348 A C 16 GENIC homozygous 54363446 7 40317890 40317891 G A 34 GENIC homozygous 53887194 7 40317992 40317993 T TAG 13 GENIC homozygous 54363450 7 40317993 40317994 T G 14 GENIC homozygous 54894950 7 40320149 40320150 G A 38 GENIC homozygous 54363456 7 40320869 40320870 T G 26 GENIC homozygous 54363458 7 40324856 40324857 A T 37 GENIC homozygous 55858047 7 40327267 40327268 G A 40 GENIC homozygous 55858048 7 40330725 40330726 A G 22 GENIC homozygous 53887198 7 40331157 40331158 G A 28 GENIC homozygous 55858049 7 40332158 40332159 A G 38 GENIC homozygous 53887199 7 40333015 40333016 G GT 10 GENIC possibly homozygous 55503051 7 40334263 40334264 C T 24 GENIC homozygous 53887201 7 40334927 40334928 T C 37 GENIC homozygous 53887202 7 40335038 40335039 G A 40 GENIC homozygous 53887203 7 40335438 40335439 C T 32 GENIC homozygous 55858050 7 40335978 40335979 C T 28 GENIC homozygous 53887204 7 40336228 40336229 T C 32 GENIC homozygous 53887205 7 40336291 40336292 G A 38 GENIC homozygous 53887206 7 40337010 40337011 G T 23 GENIC homozygous 53887207 7 40337107 40337108 A G 39 GENIC homozygous 53887208 7 40337399 40337400 T C 29 GENIC homozygous 53887209 7 40337623 40337624 C T 28 GENIC homozygous 53887210 7 40338059 40338060 T C 29 GENIC homozygous 53887212 7 40338063 40338064 A C 31 GENIC homozygous 53887213 7 40339299 40339300 C T 26 GENIC homozygous 53887214 7 40339427 40339428 A T 31 GENIC homozygous 53887215 7 40339507 40339508 A AC 30 GENIC homozygous 53887216 7 40339660 40339661 C CTGTGTGTGTGTG 1 GENIC homozygous 54970841 7 40339777 40339778 T C 19 GENIC homozygous 53887217 7 40341143 40341144 C A 30 GENIC possibly homozygous 53887218 7 40341518 40341519 C T 36 GENIC homozygous 53887219 7 40341549 40341550 C T 28 GENIC homozygous 53887220 7 40341768 40341769 C T 32 GENIC homozygous 55858051 7 40342293 40342294 G T 40 GENIC homozygous 53887221 7 40342494 40342495 C T 33 GENIC homozygous 53887222 7 40342504 40342505 T C 34 GENIC homozygous 53887223 7 40342611 40342615 TCTT ---- 31 GENIC homozygous 53887224 7 40342730 40342731 T C 38 GENIC homozygous 53887225 7 40342765 40342766 C CTCTTTACCT 41 GENIC homozygous 53887226 7 40343531 40343532 G GACAA 14 GENIC homozygous 53887227 7 40343592 40343597 TTTTT ----- 3 GENIC homozygous 53887228 7 40343891 40343892 C T 32 GENIC homozygous 53887230 7 40344126 40344127 T C 18 GENIC homozygous 53887231 7 40344531 40344532 G A 43 GENIC homozygous 53887232 7 40344538 40344539 G A 43 GENIC homozygous 53887233 7 40344848 40344849 C T 25 GENIC homozygous 53887234 7 40295117 40295118 C CA 17 GENIC heterozygous 55023362