chr start stop reference nuc variant nuc depth genic status zygosity variant ID 7 49942055 49942056 G GTT 2 GENIC homozygous 54974580 7 49942060 49942061 T TTTACTA 2 GENIC homozygous 54974582 7 49942066 49942069 AGT --- 1 GENIC homozygous 54974584 7 49942070 49942071 A ACT 1 GENIC homozygous 55141582 7 49942073 49942074 T TAGG 1 GENIC homozygous 55141583 7 49942818 49942819 G A 28 GENIC homozygous 53915890 7 49947216 49947217 T C 30 GENIC homozygous 54384364 7 49944062 49944063 A G 24 GENIC homozygous 54384360 7 49947060 49947061 C T 22 GENIC homozygous 54384362 7 49947446 49947447 T C 31 GENIC homozygous 54384366 7 49948563 49948564 A ATGTG 5 GENIC homozygous 53915894 7 49948701 49948702 G T 36 GENIC homozygous 54900078 7 49948702 49948703 A G 35 GENIC homozygous 54900080 7 49949020 49949021 C A 15 GENIC homozygous 53915895 7 49949026 49949027 T TATAACCATAAAGATAAA 15 GENIC homozygous 53915896 7 49949139 49949140 T - 9 GENIC homozygous 53915897 7 49950452 49950453 C CAA 19 GENIC heterozygous 54384368 7 49950452 49950453 C CA 19 GENIC possibly homozygous 54384370 7 49951227 49951228 A AC 13 GENIC possibly homozygous 54384372 7 49951227 49951228 A ACC 13 GENIC heterozygous 54974590 7 49951866 49951867 C A 24 GENIC homozygous 53915902 7 49952321 49952322 G A 27 GENIC homozygous 53915903 7 49954333 49954334 G A 29 GENIC homozygous 54384374 7 49955334 49955335 T - 17 GENIC homozygous 53915909 7 49955560 49955561 T C 27 GENIC homozygous 53915912 7 49956101 49956102 G A 22 GENIC homozygous 54384376 7 49956376 49956377 T C 22 GENIC homozygous 53915914 7 49957083 49957084 A G 18 GENIC homozygous 54384378 7 49958058 49958059 G A 27 GENIC homozygous 54384380 7 49958502 49958503 A AT 28 GENIC homozygous 53915915 7 49958715 49958716 C T 17 GENIC homozygous 54384382 7 49959419 49959420 T C 17 GENIC homozygous 53915918 7 49959531 49959532 A G 26 GENIC homozygous 54384384 7 49960551 49960552 T TGTG 24 GENIC homozygous 54384386 7 49960611 49960612 G A 22 GENIC homozygous 54384388 7 49960662 49960663 T C 18 GENIC homozygous 54384390 7 49960925 49960934 CACACACAT --------- 21 GENIC possibly homozygous 53915919 7 49961082 49961083 G A 21 GENIC homozygous 54384392 7 49961107 49961108 G A 22 GENIC homozygous 54384394 7 49961169 49961179 CACACACACA ---------- 15 GENIC homozygous 54384396 7 49960577 49960578 T C 23 GENIC homozygous 55809019 7 49960578 49960579 C A 23 GENIC homozygous 55809021 7 49961183 49961184 C T 14 GENIC homozygous 55809023 7 49961213 49961214 T C 5 GENIC homozygous 55809025 7 49961488 49961489 T TAA 17 GENIC homozygous 54384406 7 49961537 49961538 G A 29 GENIC homozygous 54384408 7 49961625 49961626 T C 31 GENIC homozygous 54384410 7 49961635 49961636 G A 33 GENIC homozygous 54384412 7 49961968 49961969 A G 29 GENIC homozygous 54384414 7 49962130 49962131 C T 33 GENIC homozygous 54384416 7 49962220 49962221 A T 24 GENIC homozygous 54384418 7 49962367 49962368 T TGAGACTCA 26 GENIC homozygous 54384420 7 49962429 49962430 C T 26 GENIC homozygous 54384422 7 49962527 49962528 G A 26 GENIC homozygous 54384424 7 49963061 49963062 T A 26 GENIC homozygous 54384426 7 49963117 49963118 G A 26 GENIC homozygous 54384428 7 49963641 49963642 G C 21 GENIC homozygous 54384430 7 49964827 49964828 A G 23 GENIC homozygous 54384432 7 49964834 49964835 C T 23 GENIC homozygous 54384434 7 49965241 49965242 G A 22 GENIC homozygous 54384436 7 49965258 49965260 TT -- 20 GENIC homozygous 54384438 7 49965400 49965401 C T 27 GENIC homozygous 53915926 7 49965512 49965513 A AT 36 GENIC homozygous 53915927 7 49966387 49966389 TT -- 15 GENIC homozygous 53915928 7 49967344 49967345 C CTTTAT 23 GENIC homozygous 53915929 7 49967624 49967625 T G 31 GENIC homozygous 54384440 7 49967661 49967662 T G 33 GENIC homozygous 54384442 7 49968066 49968067 T A 20 GENIC homozygous 53915930 7 49968746 49968747 G A 29 GENIC homozygous 53915931 7 49971241 49971242 G A 15 GENIC homozygous 53915933 7 49971265 49971266 C T 20 GENIC homozygous 53915934 7 49971307 49971308 G A 16 GENIC homozygous 53915935 7 49971602 49971603 T TC 26 GENIC homozygous 53915936 7 49971608 49971609 A C 27 GENIC homozygous 54384444 7 49971609 49971610 C A 27 GENIC homozygous 54900094 7 49972526 49972527 G A 20 GENIC homozygous 54384446 7 49972725 49972726 A C 34 GENIC homozygous 53915937 7 49973579 49973580 G - 22 GENIC homozygous 53915938 7 49973587 49973588 G - 23 GENIC homozygous 53915939 7 49973598 49973599 C T 20 GENIC homozygous 53915940 7 49973607 49973608 G GT 20 GENIC homozygous 53915941 7 49973610 49973611 G GTT 20 GENIC homozygous 53915942 7 49973618 49973619 C CG 21 GENIC homozygous 53915943 7 49973626 49973627 T TG 21 GENIC homozygous 53915944 7 49973633 49973634 G GT 20 GENIC homozygous 53915945 7 49973641 49973642 C A 19 GENIC homozygous 53915946 7 49973646 49973647 G A 18 GENIC homozygous 53915947 7 49973652 49973653 C A 18 GENIC homozygous 53915948 7 49973661 49973662 A AT 18 GENIC homozygous 53915949 7 49973668 49973669 G GA 19 GENIC homozygous 53915950 7 49973672 49973673 T C 19 GENIC homozygous 54384448 7 49973681 49973682 C CT 21 GENIC homozygous 53915951 7 49973831 49973832 T G 18 GENIC homozygous 54384450 7 49974037 49974039 TA -- 4 GENIC homozygous 53915952 7 49974210 49974211 T C 21 GENIC homozygous 53915953 7 49975566 49975567 C - 6 GENIC homozygous 53915954 7 49975668 49975669 A - 8 GENIC homozygous 54195277 7 49975656 49975657 C T 8 GENIC homozygous 54195274 7 49975657 49975658 C T 8 GENIC homozygous 54195275 7 49975660 49975661 C A 8 GENIC homozygous 54195276 7 49975671 49975673 CC -- 8 GENIC homozygous 54195278 7 49975698 49975699 T - 3 GENIC homozygous 53915956 7 49980601 49980602 T C 26 GENIC homozygous 53915957 7 49980854 49980855 T TAGATAGATAGATAGATAGATATAAC 8 GENIC heterozygous 55809027 7 49984686 49984687 T - 12 GENIC homozygous 54900096 7 49985283 49985284 T TTGTGTGTG 7 GENIC homozygous 54384454 7 49986247 49986248 C T 16 GENIC homozygous 54384456 7 49986257 49986258 A G 19 GENIC homozygous 53915972 7 49988821 49988822 G A 31 GENIC homozygous 54384458 7 49989453 49989454 C T 26 GENIC homozygous 53915986 7 49991223 49991224 C CT 22 GENIC homozygous 53915993 7 49991434 49991437 AAT --- 22 GENIC homozygous 54384460 7 49992117 49992118 T C 24 GENIC homozygous 54384462 7 49992317 49992318 A C 15 GENIC homozygous 54384464 7 49992356 49992357 G A 16 GENIC homozygous 54384466 7 49992382 49992383 G - 10 GENIC homozygous 54384470 7 49992384 49992399 TTGCTTGCTTGCTTG --------------- 13 GENIC homozygous 54384472 7 49992431 49992432 G A 20 GENIC homozygous 54384474 7 49992479 49992480 C G 26 GENIC homozygous 54384476 7 49992561 49992562 A G 26 GENIC homozygous 54384478 7 49993230 49993233 AAA --- 12 GENIC possibly homozygous 54384480 7 49993231 49993233 AA -- 12 GENIC heterozygous 53915998 7 49993654 49993655 A - 20 GENIC homozygous 54384482 7 49993786 49993787 T C 18 GENIC homozygous 54384484 7 49993851 49993852 T C 16 GENIC homozygous 54384486 7 49993898 49993899 C A 18 GENIC homozygous 54384488 7 49994173 49994174 T C 30 GENIC homozygous 54384490 7 49994990 49994991 G A 19 GENIC homozygous 54384492 7 49995006 49995007 A G 20 GENIC homozygous 54384494 7 49995513 49995514 C T 24 GENIC homozygous 54384496 7 49995600 49995601 G A 25 GENIC homozygous 54384498 7 49995683 49995684 G A 20 GENIC homozygous 54384500 7 49996922 49996923 A G 30 GENIC homozygous 54384508 7 49995686 49995687 T G 21 GENIC homozygous 54384502 7 49995700 49995701 A C 16 GENIC homozygous 54384504 7 49996172 49996173 T A 23 GENIC homozygous 54384506 7 49997689 49997690 A AGT 3 GENIC heterozygous 54974598 7 49997846 49997847 T A 14 GENIC homozygous 54384512 7 49998967 49998968 G GAGTCACTACAGACT 18 GENIC homozygous 53916004 7 49999750 49999751 G A 24 GENIC homozygous 54384514 7 50000719 50000723 CACA ---- 11 GENIC homozygous 55024205 7 50000796 50000797 A C 25 GENIC homozygous 54384518 7 50000943 50000944 T C 30 GENIC homozygous 54384520 7 50001549 50001550 T C 12 GENIC homozygous 54384522 7 50001557 50001558 T C 14 GENIC homozygous 54384524 7 50001559 50001560 T G 12 GENIC homozygous 54384526 7 50002293 50002294 T TA 23 GENIC homozygous 54384528 7 50002337 50002338 T G 33 GENIC homozygous 54384530 7 50003248 50003249 T C 28 GENIC homozygous 54384532 7 50003459 50003460 A T 19 GENIC homozygous 54384534 7 50004260 50004264 GAGA ---- 37 GENIC homozygous 54384536 7 50004900 50004901 T C 30 GENIC homozygous 54384538 7 50005113 50005114 A - 12 GENIC homozygous 53916012 7 50005195 50005197 AT -- 19 GENIC homozygous 53916014 7 50005218 50005219 C CAT 18 GENIC homozygous 54384540 7 50005230 50005231 G T 22 GENIC homozygous 55809029 7 50005836 50005837 T C 28 GENIC homozygous 54384542 7 50005844 50005845 T TA 25 GENIC homozygous 54384544 7 50006267 50006268 C - 22 GENIC homozygous 54384546 7 50006301 50006315 ACACACACACACAC -------------- 14 GENIC homozygous 55809031 7 50006524 50006525 A G 19 GENIC homozygous 53916015 7 50006678 50006710 AAATAAATAAATAAATAAATAAATAAATAAAT -------------------------------- 8 GENIC homozygous 55809033 7 50006736 50006737 T TA 9 GENIC homozygous 54384552 7 50007157 50007158 A G 24 GENIC homozygous 53916016 7 50007317 50007318 C CTCTCTCTCTCTA 11 GENIC homozygous 55809035 7 50007747 50007748 A G 24 GENIC homozygous 54384558 7 50007982 50007983 G A 26 GENIC homozygous 54384560 7 50008500 50008501 C T 25 GENIC homozygous 54384562 7 50008625 50008626 C T 31 GENIC homozygous 54384564 7 50009364 50009365 A T 16 GENIC homozygous 55809037 7 50009365 50009366 A T 17 GENIC homozygous 53916020 7 50009427 50009428 T C 17 GENIC homozygous 54384566 7 50009579 50009580 C G 26 GENIC homozygous 54384568 7 50010457 50010458 T C 32 GENIC homozygous 54384570 7 50010496 50010497 T C 21 GENIC homozygous 54384572 7 50010850 50010851 G T 22 GENIC homozygous 54384574 7 50011165 50011166 C CAAG 20 GENIC homozygous 54384576 7 50011185 50011186 G A 21 GENIC homozygous 54384578 7 50011264 50011265 G A 25 GENIC homozygous 54384580 7 50011584 50011596 TTCCTTCCTTCC ------------ 14 GENIC homozygous 55809039 7 50012070 50012071 A AG 18 GENIC possibly homozygous 54384584 7 50012164 50012165 T G 27 GENIC homozygous 54384586 7 50014709 50014710 G A 23 GENIC homozygous 54384588 7 50015553 50015554 T G 20 GENIC homozygous 54384590 7 50015770 50015771 A G 20 GENIC homozygous 54384592 7 50015987 50015988 A G 27 GENIC homozygous 54384594 7 50016646 50016647 T C 12 GENIC homozygous 54384596 7 50017256 50017257 T A 26 GENIC homozygous 54384598 7 50017339 50017340 G A 27 GENIC homozygous 54384600 7 50018072 50018073 A C 27 GENIC homozygous 54384602 7 50018188 50018189 C T 30 GENIC homozygous 54384604 7 50022125 50022126 C T 32 GENIC homozygous 54384606 7 50023648 50023649 T C 36 GENIC homozygous 53916027 7 50023741 50023742 T C 29 GENIC homozygous 53916028 7 50024085 50024086 T C 39 GENIC homozygous 53916029 7 50024190 50024191 A G 29 GENIC homozygous 53916030 7 50025152 50025153 G GT 22 GENIC homozygous 54384608 7 50025302 50025303 C T 18 GENIC homozygous 53916032 7 50025377 50025378 A G 24 GENIC homozygous 54384610 7 50025524 50025525 G C 24 GENIC homozygous 53916033 7 50025540 50025542 AG -- 21 GENIC homozygous 54384612 7 50025762 50025763 G A 28 GENIC possibly homozygous 54384614 7 50025899 50025900 C G 26 GENIC homozygous 53916035 7 50026028 50026029 A G 15 GENIC homozygous 54384616 7 50026038 50026039 C T 15 GENIC homozygous 53916037 7 50026926 50026927 A G 26 GENIC homozygous 54384618 7 50027975 50027976 A G 16 GENIC homozygous 53916044 7 50028223 50028225 AA -- 13 GENIC heterozygous 53916045 7 50028224 50028225 A - 13 GENIC possibly homozygous 54384620 7 50028410 50028411 A G 23 GENIC homozygous 54384622 7 50029772 50029773 A G 26 GENIC homozygous 53916052 7 50029831 50029832 C A 4 GENIC homozygous 53916053 7 50029833 50029845 GCGCGCGCGCGC ------------ 3 GENIC homozygous 54900120 7 50029856 50029857 G C 1 GENIC homozygous 53916056 7 50029873 50029874 A AC 2 GENIC homozygous 54974608 7 50029877 50029895 AATAAATAAATAAATGTT ------------------ 3 GENIC heterozygous 53916058 7 50029895 50029896 T C 2 GENIC homozygous 54974610 7 50029897 50029898 A C 2 GENIC homozygous 54974612 7 50029899 50029900 A C 3 GENIC homozygous 54974614 7 50030079 50030080 T C 14 GENIC homozygous 53916061 7 50030093 50030094 C A 15 GENIC homozygous 54384632 7 50030235 50030236 G C 28 GENIC homozygous 53916062 7 50030489 50030490 G C 25 GENIC homozygous 53916063 7 50030540 50030541 G C 35 GENIC homozygous 54384634 7 50030611 50030612 C G 35 GENIC homozygous 54384636 7 50030628 50030629 T TG 32 GENIC homozygous 53916064 7 50030657 50030658 T A 30 GENIC homozygous 54384638 7 50031142 50031143 G A 27 GENIC homozygous 54384640 7 50031576 50031577 A G 23 GENIC homozygous 54384642 7 50031664 50031665 T G 25 GENIC homozygous 54384644 7 50031680 50031681 T A 24 GENIC homozygous 54384646 7 50033014 50033015 T A 16 GENIC homozygous 53916071 7 50033061 50033062 G GT 14 GENIC homozygous 54384650 7 50033079 50033080 G GT 11 GENIC heterozygous 53916072 7 50033079 50033080 G GTTT 11 GENIC heterozygous 54384652 7 50033079 50033080 G GTT 11 GENIC heterozygous 54195289 7 50033399 50033400 A G 38 GENIC homozygous 54384654 7 50033525 50033526 T C 22 GENIC homozygous 53916074 7 50033886 50033888 AT -- 7 GENIC homozygous 55809041 7 50033913 50033927 CACACACACACACT -------------- 8 GENIC homozygous 55809043 7 50034102 50034103 G A 23 GENIC homozygous 54384656 7 50034172 50034178 TATATA ------ 15 GENIC homozygous 54384658 7 50034511 50034512 G A 22 GENIC homozygous 54384660 7 50034608 50034609 G A 19 GENIC homozygous 53916081 7 50034672 50034673 T A 23 GENIC homozygous 54384662 7 50034934 50034935 A C 28 GENIC homozygous 54384664 7 50034957 50034958 G A 28 GENIC homozygous 54384666 7 50035122 50035123 A C 30 GENIC homozygous 54384668 7 50035165 50035166 A G 38 GENIC possibly homozygous 53916083 7 50035381 50035382 C A 40 GENIC homozygous 54384670 7 50035694 50035695 G A 21 GENIC homozygous 54384672 7 50035843 50035844 A G 23 GENIC homozygous 53916085 7 50036301 50036302 T C 27 GENIC homozygous 53916086 7 50036340 50036356 GTGTGTGTGTTCAAAG ---------------- 35 GENIC homozygous 54384674 7 50036443 50036444 T G 29 GENIC homozygous 54384678 7 50036534 50036535 G A 27 GENIC homozygous 54384680 7 50036758 50036759 T C 15 GENIC homozygous 53916088 7 50036778 50036779 A T 22 GENIC homozygous 54384682 7 50036821 50036822 A C 26 GENIC homozygous 53916089 7 50036822 50036823 C T 26 GENIC homozygous 55809045 7 50036863 50036864 G C 21 GENIC homozygous 54384684 7 50037296 50037297 T C 25 GENIC homozygous 53916091 7 50037866 50037867 C T 20 GENIC homozygous 54384686 7 50038741 50038745 ATAA ---- 5 GENIC homozygous 53916099 7 50038825 50038826 T TTGTAAAG 9 GENIC homozygous 54900134 7 50038981 50038982 A G 19 GENIC homozygous 53916102 7 50039098 50039099 T TTTGG 12 GENIC homozygous 54384702 7 50039276 50039277 A G 14 GENIC homozygous 53916104 7 50039476 50039477 T C 20 GENIC homozygous 53916105 7 50039516 50039517 T C 26 GENIC homozygous 53916106 7 50039611 50039612 T A 20 GENIC homozygous 53916108 7 50039677 50039678 T A 21 GENIC homozygous 53916109 7 50041488 50041489 G A 16 GENIC homozygous 54384710 7 50039983 50039984 C T 28 GENIC homozygous 54384704 7 50040140 50040141 A T 23 GENIC homozygous 54384706 7 50040150 50040151 T A 23 GENIC homozygous 53916114 7 50041259 50041265 GTGTGT ------ 6 GENIC homozygous 55809047 7 50041464 50041465 A ATGTGTG 6 GENIC homozygous 55809049