chr start stop reference nuc variant nuc depth genic status zygosity variant ID 7 78536651 78536652 T C 29 GENIC homozygous 54205885 7 78536718 78536719 A G 13 GENIC homozygous 54205886 7 78536886 78536887 A AATAT 11 GENIC homozygous 54984273 7 78538945 78538946 G A 26 GENIC homozygous 54858489 7 78539907 78539908 C T 23 GENIC homozygous 54858490 7 78540517 78540518 G A 22 GENIC homozygous 54858491 7 78541018 78541019 T C 32 GENIC homozygous 54858492 7 78541669 78541670 C CACACACACACACACACACAG 21 GENIC possibly homozygous 54984275 7 78541689 78541691 AG -- 23 GENIC homozygous 54205894 7 78541992 78541993 T C 25 GENIC homozygous 54858493 7 78542306 78542307 C A 32 GENIC homozygous 54858494 7 78542957 78542958 G A 22 GENIC homozygous 54205897 7 78543596 78543597 A T 22 GENIC homozygous 54205899 7 78543685 78543686 C G 20 GENIC homozygous 54858495 7 78543756 78543757 T C 31 GENIC homozygous 54205900 7 78544518 78544519 C G 33 GENIC homozygous 54205902 7 78546681 78546682 G GAAAA 6 GENIC homozygous 54984277 7 78548606 78548607 G A 37 GENIC homozygous 54858496 7 78548831 78548835 GCTA ---- 31 GENIC homozygous 54858497 7 78549293 78549294 G GATA 33 GENIC homozygous 54205911 7 78549327 78549328 A G 25 GENIC homozygous 54205912 7 78549672 78549673 A G 34 GENIC homozygous 54205913 7 78550792 78550793 G C 26 GENIC homozygous 54205914 7 78551165 78551166 C T 28 GENIC homozygous 54858498 7 78551759 78551760 G T 35 GENIC homozygous 54858499 7 78551897 78551898 A G 47 GENIC homozygous 54454617 7 78552080 78552081 T C 25 GENIC homozygous 54205916 7 78552473 78552474 T TA 21 GENIC homozygous 54858500 7 78554349 78554350 G A 36 GENIC homozygous 54858501 7 78554358 78554359 C T 33 GENIC homozygous 54858502 7 78554477 78554478 C G 38 GENIC homozygous 54205919 7 78556185 78556186 A AC 16 GENIC heterozygous 54984279 7 78556621 78556634 CAAAAAAAAAAAA ------------- 9 GENIC heterozygous 54984281 7 78558306 78558307 T C 42 GENIC homozygous 54205937 7 78558589 78558590 A G 29 GENIC homozygous 54205939 7 78558819 78558820 T TACA 20 GENIC homozygous 54205940 7 78559188 78559189 T A 32 GENIC homozygous 54205941 7 78560032 78560033 C G 23 GENIC homozygous 54205942 7 78560277 78560305 GTGGGTGGGTGTGTGTGTGTGTGTGTGT ---------------------------- 10 GENIC possibly homozygous 54984283 7 78560548 78560550 AA -- 8 GENIC heterozygous 54984285 7 78560618 78560619 A G 19 GENIC homozygous 54858503 7 78562066 78562070 AAAA ---- 13 GENIC homozygous 54984287 7 78562074 78562076 AT -- 12 GENIC homozygous 54984289 7 78562126 78562127 A ACACACACACACACACACACACACAC 14 GENIC heterozygous 54984291 7 78562127 78562128 T A 13 GENIC heterozygous 54984293 7 78562557 78562558 T C 29 GENIC homozygous 54858504 7 78562570 78562571 C T 30 GENIC homozygous 54205945 7 78562721 78562722 C CT 11 GENIC heterozygous 53985240 7 78562740 78562741 A T 14 GENIC homozygous 54984295 7 78565154 78565155 A - 33 GENIC homozygous 54205949 7 78565215 78565216 A C 31 GENIC homozygous 54205950 7 78565596 78565597 T C 32 GENIC homozygous 54858505 7 78565710 78565711 G A 33 GENIC homozygous 54858506 7 78566382 78566384 TA -- 36 GENIC homozygous 54858507 7 78567354 78567366 ACACACACACAC ------------ 6 GENIC heterozygous 54984297 7 78567356 78567366 ACACACACAC ---------- 6 GENIC heterozygous 55027498 7 78567470 78567471 G GACAC 17 GENIC possibly homozygous 54858508 7 78567593 78567594 G GA 16 GENIC heterozygous 54984299 7 78567616 78567617 C CA 19 GENIC heterozygous 54984301 7 78567802 78567803 T C 33 GENIC homozygous 54205961 7 78568435 78568436 C T 22 GENIC homozygous 54858510 7 78570042 78570043 T TC 7 GENIC homozygous 54984303 7 78570058 78570059 T C 4 GENIC homozygous 54984305 7 78570068 78570069 T C 3 GENIC homozygous 54984307 7 78570070 78570082 TATATATGTATG ------------ 4 GENIC homozygous 54984309 7 78570088 78570093 TGTGT ----- 2 GENIC homozygous 55027500 7 78570540 78570550 TGTGCGTGTG ---------- 4 GENIC heterozygous 54984311 7 78570937 78570938 G GA 17 GENIC homozygous 54205970 7 78571298 78571299 T C 32 GENIC homozygous 54205971 7 78571481 78571483 AA -- 13 GENIC possibly homozygous 54984315 7 78571745 78571746 T A 11 GENIC homozygous 54205975 7 78571946 78571947 A AACAAAAG 11 GENIC homozygous 54205976 7 78572700 78572701 G A 32 GENIC homozygous 54858512 7 78572825 78572826 G A 25 GENIC possibly homozygous 54205978 7 78570096 78570120 TGTGTATATGTGTATATGTATATG ------------------------ 5 GENIC homozygous 54907293