chr start stop reference nuc variant nuc depth genic status zygosity variant ID 6 46515750 46515751 T A 31 GENIC homozygous 55321395 6 46517887 46517888 C CGT 18 GENIC homozygous 55321397 6 46519033 46519034 G T 38 GENIC homozygous 55321399 6 46519718 46519719 T C 23 GENIC homozygous 54876902 6 46520124 46520125 A G 28 GENIC homozygous 54876904 6 46520260 46520261 A G 42 GENIC homozygous 54876905 6 46521692 46521697 GCGCG ----- 7 GENIC homozygous 55821840 6 46521696 46521697 G GAAA 7 GENIC homozygous 55821842 6 46521811 46521812 T TTTTGGTTTGG 8 GENIC homozygous 55704200 6 46523400 46523401 G A 34 GENIC homozygous 55321401 6 46524534 46524535 C CA 15 GENIC heterozygous 55821844 6 46525135 46525137 AA -- 20 GENIC homozygous 54876916 6 46525537 46525538 A T 22 GENIC homozygous 54876918 6 46525985 46525986 G T 25 GENIC homozygous 54876919 6 46526332 46526333 T G 20 GENIC homozygous 54876921 6 46527206 46527207 A T 27 GENIC homozygous 55321409 6 46527488 46527489 C T 23 GENIC homozygous 54876922 6 46528661 46528662 C - 22 GENIC homozygous 54876927 6 46528834 46528835 G C 32 GENIC homozygous 54876929 6 46529065 46529066 T C 34 GENIC homozygous 54876930 6 46529108 46529109 C T 30 GENIC homozygous 54876931 6 46529312 46529313 A C 29 GENIC homozygous 54876932 6 46530205 46530206 T TACGGCCTC 35 GENIC homozygous 54876933 6 46530682 46530683 G A 17 GENIC homozygous 55321411 6 46530761 46530762 C - 21 GENIC homozygous 54364674 6 46531048 46531049 A G 21 GENIC homozygous 54876936 6 46531520 46531521 T TA 28 GENIC possibly homozygous 55321413 6 46531520 46531521 T TAA 28 GENIC heterozygous 55704271 6 46532201 46532202 T C 35 GENIC possibly homozygous 54876937 6 46532254 46532255 A - 34 GENIC homozygous 54876938 6 46535448 46535450 AA -- 14 GENIC heterozygous 54876951 6 46535789 46535790 T - 78 GENIC heterozygous 54364697 6 46535959 46535960 G - 73 GENIC heterozygous 54364703 6 46536402 46536403 C CAA 34 GENIC heterozygous 55321415 6 46536413 46536414 A ATTTCTAGATATGTATTT 39 GENIC heterozygous 55704281 6 46532255 46532256 A T 34 GENIC homozygous 55497747 6 46535593 46535594 A AT 55 GENIC heterozygous 55497749 6 46535687 46535688 A AT 60 GENIC heterozygous 55497751 6 46530766 46530767 C - 21 GENIC homozygous 55406251 6 46530771 46530772 C CA 23 GENIC homozygous 55406254 6 46537420 46537421 T C 30 GENIC homozygous 54876954 6 46537619 46537622 AAA --- 22 GENIC homozygous 55497753 6 46538485 46538486 T C 31 GENIC homozygous 54876955 6 46539177 46539183 TTTTTG ------ 15 GENIC homozygous 54876957 6 46539267 46539268 C T 20 GENIC homozygous 54876959 6 46540128 46540129 C CATT 22 GENIC homozygous 54364711 6 46540521 46540547 GCTACTTAGCCAGAGAATAAAGCAAG -------------------------- 2 GENIC homozygous 56499916 6 46541202 46541203 A G 26 GENIC homozygous 54876961 6 46541477 46541478 T G 31 GENIC homozygous 55321421 6 46541803 46541804 T TG 20 GENIC homozygous 55321423 6 46542297 46542298 A G 4 GENIC homozygous 54876965 6 46542397 46542398 C CTT 8 GENIC homozygous 54364727 6 46543603 46543604 C G 23 GENIC homozygous 54876966 6 46543977 46543978 A T 27 GENIC homozygous 54876967 6 46545310 46545311 G A 30 GENIC homozygous 54876968 6 46545324 46545325 T C 32 GENIC homozygous 54876969 6 46545327 46545328 A G 33 GENIC homozygous 55321425 6 46545392 46545393 G T 27 GENIC homozygous 54876970 6 46545878 46545879 G GCA 5 GENIC heterozygous 55704344 6 46545928 46545929 A G 16 GENIC homozygous 54876971 6 46546133 46546134 A G 32 GENIC homozygous 54876972 6 46546313 46546314 G A 34 GENIC homozygous 54876973 6 46546430 46546431 T C 21 GENIC homozygous 54876974 6 46546510 46546511 C CT 17 GENIC homozygous 54876976 6 46547208 46547209 C CCAGACAGTCAGCT 19 GENIC homozygous 54876978 6 46547220 46547221 T G 19 GENIC homozygous 54876979 6 46547631 46547632 A C 28 GENIC homozygous 54876980 6 46547634 46547635 T G 28 GENIC homozygous 54876981 6 46548133 46548134 G C 20 GENIC homozygous 54876983 6 46548270 46548276 ACACAC ------ 7 GENIC homozygous 55821850 6 46548759 46548760 A G 34 GENIC homozygous 54876986 6 46548924 46548925 C T 25 GENIC homozygous 54876987 6 46549886 46549887 C CCA 21 GENIC homozygous 54876989 6 46549919 46549920 C G 29 GENIC homozygous 54876990 6 46550087 46550088 A G 40 GENIC homozygous 54876991 6 46550092 46550093 T A 42 GENIC homozygous 54876992 6 46550758 46550759 C T 26 GENIC homozygous 54876994 6 46550974 46550975 C CAGGA 26 GENIC homozygous 54876995 6 46551615 46551616 T C 28 GENIC homozygous 54876996 6 46551849 46551850 T C 26 GENIC homozygous 54876997 6 46551933 46551934 A G 25 GENIC homozygous 54876998 6 46552687 46552688 A G 20 GENIC homozygous 54877002 6 46552087 46552088 T C 15 GENIC homozygous 55321427 6 46552110 46552111 G T 19 GENIC homozygous 54876999 6 46552442 46552443 G A 25 GENIC homozygous 55321429 6 46552790 46552791 C G 17 GENIC homozygous 54877003 6 46552910 46552911 A T 36 GENIC homozygous 54877004 6 46553000 46553030 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG ------------------------------ 13 GENIC homozygous 55821853 6 46553092 46553093 C CAGAG 33 GENIC homozygous 54877010 6 46553109 46553110 A G 38 GENIC homozygous 54877011 6 46553207 46553208 G T 28 GENIC homozygous 54877012 6 46553217 46553218 A ATG 32 GENIC homozygous 54877013 6 46553456 46553457 G T 37 GENIC homozygous 55321431 6 46553573 46553574 C CCACACACA 6 GENIC homozygous 55821855 6 46553608 46553609 A ACACAAACACACCACACG 18 GENIC homozygous 55497761 6 46553660 46553661 C G 16 GENIC homozygous 54877021 6 46553795 46553796 A G 19 GENIC homozygous 54877022 6 46553953 46553954 A G 19 GENIC homozygous 54877023 6 46554283 46554284 A ACACACACACAC 10 GENIC heterozygous 55821857 6 46554383 46554384 A G 30 GENIC homozygous 54877024 6 46554548 46554549 T C 30 GENIC homozygous 54877025 6 46554739 46554740 A G 30 GENIC homozygous 55321433 6 46554816 46554817 G A 21 GENIC homozygous 54877026 6 46554944 46554945 T C 35 GENIC homozygous 54877027 6 46555010 46555011 G A 19 GENIC homozygous 54877028 6 46555487 46555488 T A 24 GENIC homozygous 54877029 6 46556074 46556078 ATAG ---- 6 GENIC homozygous 56533699 6 46556136 46556148 GATGGATGGATG ------------ 6 GENIC homozygous 55821859 6 46556549 46556550 C G 26 GENIC homozygous 54877035 6 46556611 46556612 G A 23 GENIC homozygous 54877036 6 46556764 46556776 ACAGACATATAT ------------ 29 GENIC homozygous 55321441 6 46556948 46556949 T A 30 GENIC homozygous 54877037 6 46557114 46557115 T A 28 GENIC homozygous 54877038 6 46557161 46557162 A G 19 GENIC homozygous 54877039 6 46557510 46557511 T G 25 GENIC homozygous 54877041 6 46557879 46557880 A G 5 GENIC homozygous 54877044 6 46557888 46557889 T C 6 GENIC homozygous 54877045 6 46557979 46557980 G - 2 GENIC homozygous 55821861 6 46558330 46558331 T TCA 5 GENIC homozygous 54364737 6 46558344 46558345 A G 9 GENIC homozygous 54877049 6 46559075 46559076 G A 15 GENIC homozygous 55321443 6 46559165 46559166 G C 16 GENIC homozygous 54877050 6 46559439 46559509 TCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTC ---------------------------------------------------------------------- 11 GENIC homozygous 55821863 6 46559608 46559609 G A 24 GENIC homozygous 55321445 6 46560378 46560379 T G 27 GENIC homozygous 55321447 6 46560392 46560393 T C 27 GENIC homozygous 54877052 6 46560403 46560404 T C 29 GENIC homozygous 54877053 6 46560498 46560499 T C 36 GENIC homozygous 54877054 6 46560615 46560616 G A 35 GENIC homozygous 54877055 6 46560651 46560652 C A 30 GENIC homozygous 54877056 6 46561018 46561019 T C 19 GENIC homozygous 54877057 6 46561429 46561430 C T 25 GENIC homozygous 54877059 6 46561532 46561533 C CG 13 GENIC heterozygous 55321449 6 46561583 46561584 C T 15 GENIC homozygous 54877061 6 46561892 46561893 G A 29 GENIC homozygous 54877062 6 46562008 46562009 G T 17 GENIC homozygous 54877063 6 46562060 46562061 A G 25 GENIC homozygous 54877064 6 46562129 46562130 G GGTA 4 GENIC homozygous 55821865 6 46562268 46562269 A T 17 GENIC homozygous 54877066 6 46562338 46562339 A C 13 GENIC homozygous 54877067 6 46562347 46562348 A G 16 GENIC homozygous 54877068 6 46562364 46562365 G C 16 GENIC homozygous 54877069 6 46562372 46562373 T C 19 GENIC homozygous 54877070 6 46562413 46562414 G A 19 GENIC homozygous 54877071 6 46562434 46562435 T C 23 GENIC homozygous 54877072 6 46562443 46562444 T C 22 GENIC homozygous 54877073 6 46562518 46562546 TGGATGGATGGATGGATGGATGGATGGG ---------------------------- 18 GENIC homozygous 55821867 6 46562556 46562557 C T 20 GENIC homozygous 54877074 6 46562581 46562582 A - 23 GENIC homozygous 54877075 6 46562667 46562668 A C 28 GENIC homozygous 54877076 6 46562787 46562791 TAGA ---- 13 GENIC homozygous 55821869 6 46562978 46562979 C G 29 GENIC homozygous 55321451 6 46563062 46563063 A AC 17 GENIC homozygous 54877077 6 46563214 46563215 A G 28 GENIC homozygous 54877078 6 46563265 46563266 A G 30 GENIC homozygous 54877079 6 46564177 46564178 C G 17 GENIC homozygous 54877081 6 46564471 46564472 G A 14 GENIC homozygous 55321453 6 46564744 46564745 T TACACAC 9 GENIC homozygous 55821871 6 46565581 46565582 T C 30 GENIC homozygous 54877086 6 46566171 46566172 A T 32 GENIC homozygous 54877087 6 46566467 46566468 G T 25 GENIC homozygous 54877088 6 46566542 46566543 G A 31 GENIC homozygous 54877089 6 46566613 46566614 A ACAGAGAGGGCACAG 30 GENIC homozygous 54877090 6 46566799 46566800 A G 34 GENIC homozygous 55321455 6 46567151 46567262 CCTCAAATTTTTTTTCTTTTTTTTTTTTTTTTTTTTTCCGGAGCTAGGGACTGAACCCAGGGCCTTGCGGTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACC --------------------------------------------------------------------------------------------------------------- 27 GENIC homozygous 55406260 6 46567465 46567466 T G 30 GENIC homozygous 54877091 6 46567587 46567588 G A 28 GENIC homozygous 55321457 6 46567795 46567796 T TG 5 GENIC homozygous 55821874 6 46567858 46567859 A G 14 GENIC homozygous 55321459 6 46567872 46567873 G GA 12 GENIC homozygous 55321461 6 46567898 46567899 T G 15 GENIC homozygous 54877094 6 46567933 46567936 AGG --- 12 GENIC homozygous 55321463 6 46568187 46568200 TCCCTCCCCCCCT ------------- 8 GENIC homozygous 55704368 6 46568212 46568223 TTTTTTTCTTC ----------- 5 GENIC heterozygous 55704370 6 46568450 46568454 GGGA ---- 33 GENIC homozygous 55497775 6 46568453 46568454 A ACCC 30 GENIC homozygous 55497777 6 46569295 46569296 G A 14 GENIC homozygous 54877102 6 46568788 46568789 G T 31 GENIC possibly homozygous 54877098 6 46568840 46568845 GCAAA ----- 25 GENIC homozygous 54364747 6 46568978 46568979 G A 29 GENIC homozygous 54877100 6 46569212 46569213 G T 18 GENIC homozygous 54877101 6 46570253 46570254 C G 3 GENIC homozygous 55321467 6 46570315 46570316 A C 3 GENIC homozygous 54364749 6 46570379 46570380 G C 3 GENIC homozygous 54364751