chr start stop reference nuc variant nuc depth genic status zygosity variant ID 6 138732264 138732265 C T 35 GENIC homozygous 55336657 6 138732302 138732303 G C 58 GENIC homozygous 55336659 6 138732303 138732304 C CCA 53 GENIC homozygous 55336661 6 138732758 138732759 G C 18 GENIC homozygous 55336663 6 138733410 138733414 TTTG ---- 19 GENIC heterozygous 55336665 6 138734014 138734015 G GTGGTTCACAACCATC 31 GENIC homozygous 55336666 6 138734779 138734780 A C 39 GENIC homozygous 56505976 6 138733916 138733917 C T 23 GENIC homozygous 56505973 6 138734595 138734596 G T 29 GENIC homozygous 56505974 6 138734626 138734627 C T 29 GENIC homozygous 56505975 6 138735225 138735226 A G 62 GENIC homozygous 55336676 6 138735506 138735507 T - 3 GENIC homozygous 55544025 6 138735768 138735769 C CCTTCCTTCCTTCCTTCCTT 23 GENIC homozygous 56107272 6 138735910 138735911 C T 43 GENIC homozygous 56505977 6 138736047 138736048 G A 53 GENIC homozygous 56505978 6 138736130 138736131 C A 44 GENIC homozygous 56505979 6 138736267 138736268 T C 11 GENIC homozygous 56505980 6 138736412 138736413 T TCCCCACGGGAGA 45 GENIC homozygous 56505981 6 138736638 138736639 G A 37 GENIC homozygous 56505982 6 138736750 138736751 T C 35 GENIC homozygous 56505983 6 138736847 138736848 A C 41 GENIC homozygous 55336682 6 138736866 138736867 A T 47 GENIC homozygous 55336684 6 138736936 138736937 G A 27 GENIC homozygous 56505984 6 138737140 138737141 G T 35 GENIC homozygous 56505985 6 138737309 138737310 T C 62 GENIC homozygous 55336694 6 138737327 138737328 T C 66 GENIC homozygous 56505986 6 138738093 138738094 C T 30 GENIC homozygous 55336696 6 138738117 138738118 A G 29 GENIC homozygous 56505987 6 138738318 138738319 C T 39 GENIC homozygous 56505988 6 138738370 138738371 T G 50 GENIC homozygous 56505989 6 138739828 138739829 A G 31 GENIC possibly homozygous 56505990 6 138740190 138740191 T TA 19 GENIC homozygous 56505991 6 138740191 138740192 T A 20 GENIC homozygous 56505992 6 138740808 138740809 T C 1 GENIC homozygous 55336710 6 138740830 138740831 A AAAAAAG 1 GENIC homozygous 56505993 6 138741240 138741241 A C 25 GENIC homozygous 56505994 6 138741266 138741269 AAA --- 20 GENIC homozygous 56505995 6 138741278 138741279 A C 21 GENIC homozygous 56505996 6 138741309 138741310 C T 30 GENIC homozygous 56505997 6 138741633 138741634 T A 37 GENIC homozygous 56505998 6 138741776 138741777 C CCCT 11 GENIC possibly homozygous 56505999 6 138741960 138741961 C A 36 GENIC homozygous 56506000 6 138742049 138742057 ATCAGCCT -------- 30 GENIC homozygous 56506001 6 138742415 138742445 GCCTGCGCCTGCGCCTGCGTCTGCGTCTGT ------------------------------ 10 GENIC heterozygous 56506002 6 138742717 138742718 A AG 7 GENIC homozygous 56053179 6 138743090 138743091 G - 48 GENIC homozygous 56506003 6 138743111 138743112 G A 51 GENIC homozygous 56506004 6 138743148 138743149 G T 40 GENIC homozygous 56506005 6 138743205 138743206 T C 33 GENIC homozygous 55336730 6 138743349 138743359 GTGAATGTGT ---------- 40 GENIC homozygous 55544033 6 138743376 138743377 C CGTCCCGACGCTTAGTTCA 41 GENIC homozygous 55336732 6 138743624 138743625 T C 52 GENIC homozygous 56506006 6 138743799 138743800 C T 34 GENIC homozygous 56506007 6 138743887 138743888 G T 33 GENIC homozygous 56506008 6 138743900 138743901 G C 35 GENIC homozygous 56506009 6 138743937 138743938 T C 30 GENIC homozygous 56506010 6 138743950 138743951 A G 32 GENIC homozygous 55336736 6 138743974 138743975 G A 20 GENIC homozygous 56506011 6 138744514 138744515 A AAGCCGTGGAGTGGT 36 GENIC homozygous 56506012 6 138744569 138744570 G T 46 GENIC homozygous 56506013 6 138744739 138744740 A G 41 GENIC homozygous 56506014 6 138744858 138744859 A C 41 GENIC homozygous 55336738 6 138744859 138744860 A G 41 GENIC homozygous 56506015 6 138744894 138744895 G T 38 GENIC homozygous 56506016 6 138745170 138745171 T C 39 GENIC homozygous 55336740 6 138745203 138745204 G A 34 GENIC homozygous 56506017 6 138745217 138745221 GTTT ---- 23 GENIC homozygous 56506018 6 138745327 138745328 T C 24 GENIC homozygous 56506019 6 138745432 138745445 TTTTCCTCCTCTC ------------- 76 GENIC homozygous 56506020 6 138745463 138745464 C T 76 GENIC homozygous 56506021 6 138745486 138745487 T C 55 GENIC homozygous 56506022 6 138745827 138745828 A G 55 GENIC homozygous 56506023 6 138745828 138745829 G C 57 GENIC homozygous 56506024 6 138745893 138745894 C A 32 GENIC homozygous 56506025 6 138745948 138745952 GATC ---- 14 GENIC homozygous 55336742 6 138746813 138746814 A AAAT 38 GENIC homozygous 56506026 6 138746852 138746853 G A 38 GENIC homozygous 56506027 6 138746950 138746951 G A 51 GENIC homozygous 56506028 6 138747137 138747138 C T 11 GENIC homozygous 56506029 6 138747159 138747160 A C 20 GENIC homozygous 56506030 6 138747182 138747183 T G 23 GENIC homozygous 56506031 6 138747244 138747245 G A 23 GENIC homozygous 56506032 6 138747444 138747445 C CATCATCATCATCATCATCATCATCATCATCATT 28 GENIC homozygous 56506033 6 138747520 138747521 C A 20 GENIC homozygous 56506034 6 138747521 138747522 A T 21 GENIC homozygous 56506035 6 138747543 138747544 T C 31 GENIC homozygous 56506036 6 138748067 138748068 C T 48 GENIC homozygous 56506037 6 138748109 138748110 T C 46 GENIC homozygous 56506038 6 138748487 138748488 T C 12 GENIC homozygous 56506039 6 138748514 138748526 TTCTTCTTTTTT ------------ 7 GENIC homozygous 56506040 6 138748599 138748600 G A 15 GENIC homozygous 56506041 6 138748797 138748798 A G 14 GENIC homozygous 56506042 6 138749107 138749108 A G 43 GENIC homozygous 56506043 6 138749452 138749453 G A 37 GENIC possibly homozygous 55336750 6 138749719 138749720 T C 38 GENIC homozygous 55336756 6 138749760 138749761 A T 36 GENIC homozygous 55336758 6 138751413 138751414 C G 18 GENIC homozygous 56506044 6 138750385 138750386 T C 60 GENIC homozygous 55336768 6 138750447 138750448 G T 76 GENIC homozygous 55336770 6 138750450 138750451 A C 77 GENIC homozygous 55336772 6 138751268 138751280 ACACACACACAC ------------ 11 GENIC heterozygous 55544035 6 138751272 138751280 ACACACAC -------- 11 GENIC heterozygous 56010386 6 138738170 138738171 T - 14 GENIC possibly homozygous 55272837 6 138746018 138746019 T A 13 GENIC homozygous 55182193 6 138751475 138751476 C A 39 GENIC homozygous 56506045 6 138751527 138751528 C T 37 GENIC homozygous 56506046 6 138751607 138751608 G GTT 12 GENIC homozygous 56506047 6 138751611 138751612 A T 13 GENIC homozygous 56506048 6 138752086 138752087 T TC 41 GENIC homozygous 55336778 6 138752102 138752103 A G 48 GENIC homozygous 56506049 6 138752146 138752147 G A 55 GENIC homozygous 56506050 6 138752213 138752214 C T 38 GENIC homozygous 56506051 6 138752360 138752361 T TG 17 GENIC homozygous 56506052 6 138752403 138752404 C CTG 16 GENIC homozygous 56506053 6 138752763 138752764 T C 29 GENIC homozygous 55336783 6 138752773 138752774 A - 25 GENIC homozygous 56506054 6 138752786 138752787 C CTG 26 GENIC homozygous 56506055 6 138752813 138752814 G T 25 GENIC homozygous 56506056 6 138753071 138753072 T A 27 GENIC homozygous 55336791 6 138753286 138753287 A G 15 GENIC homozygous 55336795 6 138753342 138753343 G GAA 19 GENIC homozygous 55544037 6 138753546 138753547 G A 32 GENIC homozygous 56506057 6 138753569 138753582 CACAGGGGGAACC ------------- 28 GENIC homozygous 56506058 6 138753648 138753649 G A 55 GENIC homozygous 56506059 6 138753767 138753768 G A 60 GENIC homozygous 56506060 6 138753888 138753889 A G 28 GENIC homozygous 56506061 6 138754075 138754076 C T 49 GENIC homozygous 56506062 6 138754271 138754272 G A 31 GENIC homozygous 56506063 6 138754352 138754353 C A 33 GENIC homozygous 56506064 6 138754787 138754788 A G 54 GENIC homozygous 56506065 6 138754798 138754799 T C 50 GENIC homozygous 55336811 6 138754893 138754894 C - 30 GENIC homozygous 56506066 6 138755214 138755215 T - 11 GENIC homozygous 55055926 6 138755359 138755360 C T 29 GENIC homozygous 56506067 6 138755391 138755392 C T 25 GENIC homozygous 56506068 6 138755492 138755493 A AAAAAAAAC 3 GENIC homozygous 55544039 6 138755569 138755570 T C 17 GENIC homozygous 55336817 6 138756037 138756038 T TAC 26 GENIC homozygous 56506069 6 138756292 138756293 G A 50 GENIC homozygous 56506070 6 138756522 138756523 G A 26 GENIC homozygous 55336819 6 138756613 138756614 G T 20 GENIC homozygous 55336821 6 138756708 138756709 A T 4 GENIC homozygous 55336823 6 138756715 138756716 C T 6 GENIC homozygous 55336825 6 138756726 138756727 A G 11 GENIC homozygous 55336827 6 138756731 138756732 T - 13 GENIC homozygous 55336829 6 138756782 138756783 T C 36 GENIC homozygous 55336831 6 138756989 138756990 C A 21 GENIC homozygous 56506071 6 138757068 138757069 G A 31 GENIC homozygous 55336833 6 138757080 138757081 G A 34 GENIC homozygous 55336835 6 138757354 138757356 TA -- 3 GENIC homozygous 55544041 6 138757517 138757518 T - 6 GENIC heterozygous 56564897 6 138757519 138757520 T TACTCCTTTAAA 6 GENIC heterozygous 55869028 6 138757731 138757734 TTT --- 14 GENIC homozygous 55336849 6 138757859 138757860 T TG 28 GENIC homozygous 55336851 6 138757942 138758050 TGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCAGGGGAAAAAAAAAAAAAAACCAAAAAAAAATTTGGGGT ------------------------------------------------------------------------------------------------------------ 27 GENIC possibly homozygous 55435919 6 138758096 138758200 CCCTGGGTTCGGTCCCCAGCTCCAAAAAAAAGAAAAAGAAAAAAAAAAAAGGGGGGGTTGGGGATTTAGCTCAGCGGTAGAGCACTTGGCTAGCAAGCGCAAGC -------------------------------------------------------------------------------------------------------- 9 GENIC homozygous 56506072 6 138758322 138758323 G A 35 GENIC homozygous 56506073 6 138758382 138758383 A G 33 GENIC homozygous 55336868 6 138758419 138758422 CCT --- 30 GENIC homozygous 55336870 6 138758453 138758454 T C 35 GENIC homozygous 55336872 6 138758777 138758778 T TATGCATGTATGTATGTATGTATGTATGCATGCATGC 69 GENIC homozygous 55544045 6 138758834 138758835 T C 41 GENIC homozygous 55336880 6 138758951 138758952 A C 15 GENIC homozygous 55544047 6 138758952 138758953 G A 15 GENIC homozygous 55544049 6 138759152 138759153 C T 60 GENIC homozygous 55336882 6 138759542 138759543 C CCCCACA 30 GENIC homozygous 56506074 6 138760726 138760746 CCTTCCTCCCTCCCTCCCTC -------------------- 17 GENIC homozygous 56506075 6 138760759 138760760 T - 15 GENIC homozygous 56506076 6 138760887 138760888 T - 10 GENIC homozygous 56053181 6 138761175 138761176 T TGACGAC 41 GENIC homozygous 56506077 6 138761197 138761198 A G 70 GENIC homozygous 55336904 6 138761444 138761445 T A 28 GENIC homozygous 55336906 6 138764675 138764676 G A 37 GENIC homozygous 56506080 6 138761561 138761562 A AG 42 GENIC possibly homozygous 56506078 6 138761607 138761608 G A 48 GENIC homozygous 56506079 6 138763118 138763119 C CA 17 GENIC homozygous 54756959 6 138763365 138763366 G GA 6 GENIC heterozygous 56075680 6 138766008 138766009 C CT 5 GENIC homozygous 56506081 6 138767856 138767857 C CA 10 GENIC heterozygous 56332601 6 138767856 138767857 C CAA 10 GENIC heterozygous 56332603 6 138768152 138768153 C T 82 GENIC homozygous 56506082 6 138769930 138769931 A G 23 GENIC homozygous 56506085 6 138768845 138768846 C A 27 GENIC homozygous 56506083 6 138769129 138769139 CTCTCTCTCT ---------- 12 GENIC heterozygous 56506084 6 138770180 138770181 T C 17 GENIC homozygous 56506086 6 138770211 138770212 A G 10 GENIC homozygous 56506087 6 138770262 138770263 T C 15 GENIC homozygous 56506088 6 138770275 138770276 T TA 18 GENIC homozygous 56506089 6 138770748 138770749 T C 45 GENIC homozygous 56506090 6 138770866 138770867 A G 45 GENIC homozygous 56506091 6 138771015 138771016 A T 67 GENIC homozygous 56506092 6 138771031 138771032 G A 51 GENIC homozygous 56506093 6 138771051 138771052 T A 50 GENIC homozygous 56506094 6 138771053 138771054 C T 49 GENIC homozygous 56506095 6 138771173 138771174 A C 22 GENIC homozygous 56506096 6 138771274 138771275 G A 12 GENIC homozygous 56506097 6 138771358 138771359 C G 15 GENIC homozygous 56506098 6 138771364 138771365 C T 17 GENIC homozygous 56506099 6 138771505 138771506 T A 36 GENIC homozygous 55336971 6 138771516 138771517 A G 41 GENIC homozygous 56506100 6 138771537 138771538 T C 42 GENIC homozygous 56506101 6 138771566 138771573 TTGTCTC ------- 35 GENIC homozygous 56506102 6 138771875 138771876 G C 42 GENIC homozygous 56506103 6 138772241 138772242 T C 45 GENIC homozygous 56506104 6 138772403 138772404 C T 42 GENIC homozygous 56506105 6 138772406 138772407 G A 39 GENIC homozygous 56506106 6 138772477 138772478 A T 33 GENIC homozygous 56506107 6 138772605 138772606 G A 36 GENIC homozygous 55336975 6 138772620 138772621 C A 33 GENIC homozygous 56506108 6 138772675 138772676 A G 29 GENIC homozygous 56506109 6 138772779 138772780 A G 35 GENIC homozygous 56506110 6 138772780 138772781 T G 35 GENIC homozygous 56506111 6 138772822 138772823 T C 48 GENIC homozygous 56506112 6 138772948 138772949 G A 31 GENIC homozygous 56506113 6 138772960 138772961 A C 30 GENIC homozygous 56506114 6 138773067 138773068 C A 26 GENIC homozygous 56506115 6 138773093 138773094 G GA 38 GENIC homozygous 56506116 6 138773129 138773130 T G 55 GENIC homozygous 56506117 6 138773314 138773315 T C 28 GENIC homozygous 56506118 6 138776607 138776608 G GT 3 GENIC homozygous 56506121 6 138774795 138774796 T C 48 GENIC homozygous 56506119 6 138775318 138775319 A AT 17 GENIC homozygous 56506120 6 138775367 138775368 A G 23 GENIC homozygous 55336977 6 138776608 138776609 G GT 3 GENIC homozygous 56506122 6 138778018 138778019 T C 3 GENIC homozygous 56506123 6 138778138 138778139 C - 11 GENIC homozygous 54756966 6 138778162 138778163 G GA 11 GENIC possibly homozygous 54993091 6 138778241 138778242 A C 30 GENIC homozygous 54756968 6 138778243 138778244 C - 30 GENIC homozygous 54756970 6 138781337 138781339 AA -- 11 GENIC homozygous 56113038 6 138790269 138790270 T C 37 GENIC homozygous 55336989 6 138790561 138790562 C CT 2 GENIC homozygous 54756982 6 138791372 138791373 G GCATC 37 GENIC homozygous 55336995 6 138791626 138791627 C T 27 GENIC homozygous 56506124 6 138791893 138791894 A G 50 GENIC homozygous 55337001 6 138791898 138791899 A C 53 GENIC homozygous 55337003 6 138792011 138792012 C CG 8 GENIC homozygous 56506125 6 138792025 138792027 AA -- 7 GENIC homozygous 54756987 6 138792685 138792686 A G 46 GENIC homozygous 55337009 6 138792893 138792897 ACAC ---- 4 GENIC homozygous 55732241 6 138795648 138795673 GTGATTTGAATGTGGGTGGCCCCAT ------------------------- 42 GENIC homozygous 56506126 6 138797269 138797270 G T 24 GENIC homozygous 54756992 6 138798023 138798024 G GCACACACACACACACACACACGCACACACACACACACACGCACACACACATGCGCGCACACACACACA 15 GENIC homozygous 55653359 6 138799170 138799171 A AACACACACAC 11 GENIC homozygous 55544071 6 138799218 138799219 A - 20 GENIC homozygous 54756994 6 138799933 138799935 GT -- 23 GENIC heterozygous 55614806 6 138800447 138800448 C T 33 GENIC homozygous 55337037 6 138800587 138800588 A G 13 GENIC homozygous 56506127 6 138800670 138800777 AAGAAACCCAGGTATGGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCACAAGGCCCTGGGTTCGGTCCCCAGCTCCAAAAAAAAAAAAAAAAA ----------------------------------------------------------------------------------------------------------- 38 GENIC homozygous 55544075 6 138800919 138800920 G GA 31 GENIC homozygous 54756996 6 138801334 138801335 T - 36 GENIC homozygous 55337039 6 138801470 138801471 T C 28 GENIC homozygous 55337041 6 138802465 138802466 A C 48 GENIC homozygous 55337049 6 138802752 138802753 A ATG 17 GENIC homozygous 55337051 6 138802846 138802847 G C 47 GENIC homozygous 55337053 6 138803185 138803186 C CT 29 GENIC heterozygous 54847246 6 138804263 138804271 ACACACAA -------- 14 GENIC possibly homozygous 55825998 6 138804414 138804415 T TACACAC 86 GENIC homozygous 55337055 6 138804495 138804499 ACAC ---- 87 GENIC homozygous 55826000 6 138791523 138791527 CTAT ---- 11 GENIC homozygous 55977358