chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 104469862 104469863 C A 13 GENIC homozygous 55615912 5 104479411 104479412 A G 15 GENIC homozygous 55615918 5 104479412 104479413 A C 15 GENIC homozygous 55615920 5 104504030 104504031 T C 14 GENIC homozygous 55615936 5 104504033 104504034 T C 14 GENIC homozygous 55615938 5 104509894 104509895 T C 26 GENIC homozygous 55615942 5 104512955 104512956 A AT 10 GENIC homozygous 55615946 5 104517339 104517340 C CCAGGAAAACCAT 11 GENIC homozygous 55615956 5 104528880 104528881 C - 16 GENIC homozygous 55615960 5 104530476 104530477 G - 23 GENIC homozygous 55615964 5 104540049 104540050 A G 18 GENIC homozygous 55615966 5 104540069 104540070 G A 18 GENIC homozygous 55615968 5 104540072 104540073 G A 18 GENIC homozygous 55615970 5 104540743 104540744 G A 21 GENIC homozygous 55615972 5 104541094 104541095 C T 23 GENIC homozygous 55615974 5 104541172 104541173 T C 17 GENIC homozygous 55615976 5 104541256 104541257 A G 24 GENIC homozygous 55615978 5 104541464 104541465 A G 9 GENIC homozygous 55615980 5 104543460 104543461 T G 15 GENIC homozygous 55615984 5 104543471 104543472 A G 13 GENIC homozygous 55615986 5 104543481 104543482 T C 16 GENIC homozygous 55615988 5 104543510 104543511 C T 15 GENIC homozygous 55615990 5 104543582 104543583 G A 19 GENIC homozygous 55615992 5 104543706 104543707 C A 19 GENIC homozygous 55615994 5 104543967 104543968 C A 19 GENIC homozygous 55615996 5 104544620 104544621 A G 13 GENIC homozygous 55615998 5 104544821 104544822 G A 14 GENIC homozygous 55616000 5 104544950 104544966 TGTGTGTATGTGTGTT ---------------- 7 GENIC homozygous 56350486 5 104545853 104545854 G A 18 GENIC homozygous 55616002 5 104545984 104545985 T G 25 GENIC homozygous 55616004 5 104546094 104546095 G A 21 GENIC homozygous 55616006 5 104546247 104546248 T C 20 GENIC homozygous 55616008 5 104546618 104546619 T C 17 GENIC homozygous 55616010 5 104546824 104546825 T C 13 GENIC homozygous 55616012 5 104547199 104547200 G A 18 GENIC homozygous 55616014 5 104547202 104547204 GA -- 16 GENIC homozygous 55616016 5 104548063 104548064 T C 14 GENIC homozygous 55616018 5 104548235 104548236 C T 16 GENIC homozygous 55616020 5 104549013 104549014 A - 9 GENIC homozygous 55616024 5 104549228 104549229 G T 19 GENIC homozygous 55616026 5 104549270 104549271 C T 15 GENIC homozygous 55616028 5 104549447 104549448 A T 21 GENIC homozygous 55616030 5 104549529 104549530 A T 17 GENIC homozygous 55616032 5 104549892 104549893 A T 20 GENIC homozygous 55616034 5 104550155 104550156 C A 14 GENIC homozygous 55616036 5 104550382 104550383 G T 18 GENIC homozygous 55616038 5 104550495 104550496 G - 21 GENIC homozygous 55616040 5 104552429 104552430 C T 17 GENIC homozygous 55616044 5 104554020 104554022 TT -- 10 GENIC homozygous 55616046 5 104554112 104554113 A T 21 GENIC homozygous 55616048 5 104554708 104554709 G GA 24 GENIC possibly homozygous 55616050 5 104555963 104555964 A AACTCGGTTTT 12 GENIC homozygous 55616052 5 104556308 104556309 G A 16 GENIC homozygous 55616053 5 104557370 104557372 CC -- 7 GENIC homozygous 55616055 5 104557378 104557379 C A 7 GENIC homozygous 56350487 5 104559400 104559401 A G 13 GENIC homozygous 55616057 5 104559627 104559628 C T 21 GENIC homozygous 55616059 5 104559828 104559829 G C 14 GENIC homozygous 55616061 5 104561854 104561855 T C 12 GENIC homozygous 55616063 5 104562968 104562969 C - 13 GENIC homozygous 55616065 5 104563040 104563041 G - 20 GENIC homozygous 55616067 5 104563336 104563342 CCAGGA ------ 17 GENIC homozygous 55616069 5 104563357 104563358 C G 19 GENIC homozygous 55616073 5 104563369 104563370 T C 18 GENIC homozygous 55616075 5 104563375 104563376 G A 19 GENIC homozygous 55616077 5 104563441 104563442 T C 14 GENIC homozygous 55616079 5 104563808 104563809 A G 10 GENIC homozygous 55616081 5 104564082 104564083 T C 20 GENIC homozygous 55616083 5 104564096 104564097 A G 21 GENIC homozygous 55616085 5 104564783 104564784 C CT 17 GENIC homozygous 55616087 5 104564903 104564904 A G 17 GENIC homozygous 55616089 5 104565509 104565510 A G 7 GENIC homozygous 55616093 5 104565560 104565561 A G 8 GENIC homozygous 55616097 5 104565726 104565727 A G 21 GENIC homozygous 55616099 5 104565847 104565848 G A 7 GENIC homozygous 55616101 5 104565859 104565860 T - 6 GENIC homozygous 55616103 5 104567020 104567028 ATCAGGTA -------- 11 GENIC homozygous 55616117 5 104565942 104565943 G A 11 GENIC homozygous 55616105 5 104565948 104565949 G A 11 GENIC homozygous 55616107 5 104566731 104566732 A C 12 GENIC homozygous 55616109 5 104566902 104566903 C T 12 GENIC homozygous 55616115 5 104567409 104567410 T C 10 GENIC homozygous 55616121 5 104567410 104567411 A T 10 GENIC homozygous 55616123 5 104568399 104568400 A G 15 GENIC homozygous 55616125 5 104568688 104568689 G A 23 GENIC homozygous 55616127 5 104568741 104568742 C T 27 GENIC homozygous 55616129 5 104569510 104569511 T C 8 GENIC homozygous 55616131 5 104569565 104569566 C T 15 GENIC homozygous 55616133 5 104570091 104570092 A - 20 GENIC homozygous 55616135 5 104570221 104570222 T C 28 GENIC homozygous 55616137 5 104570276 104570277 A T 26 GENIC homozygous 55616139 5 104570338 104570339 G A 24 GENIC homozygous 55616140 5 104570892 104570897 ATACA ----- 10 GENIC homozygous 55616142 5 104572056 104572057 T TA 11 GENIC homozygous 55616150 5 104572446 104572447 C T 18 GENIC homozygous 55616152 5 104572713 104572714 G T 15 GENIC homozygous 55616154 5 104572855 104572856 G C 18 GENIC homozygous 55616156 5 104572871 104572877 GAGAGG ------ 13 GENIC homozygous 55616158 5 104573047 104573048 C CA 12 GENIC homozygous 55616172 5 104573070 104573071 C - 16 GENIC homozygous 55616174 5 104573434 104573435 G A 20 GENIC homozygous 55616178 5 104573742 104573743 A C 19 GENIC homozygous 55616180 5 104574210 104574211 G T 23 GENIC homozygous 55616182 5 104574414 104574415 A G 19 GENIC homozygous 55616184 5 104574509 104574510 A AC 23 GENIC homozygous 55616186 5 104574536 104574537 C T 27 GENIC homozygous 55616188 5 104574819 104574820 C T 20 GENIC homozygous 55616190 5 104574825 104574826 A G 20 GENIC homozygous 55616192 5 104575066 104575067 G C 16 GENIC homozygous 55616194 5 104575342 104575344 AA -- 19 GENIC homozygous 55616196 5 104575391 104575392 T G 30 GENIC homozygous 55616198 5 104575688 104575689 A G 21 GENIC homozygous 55616200 5 104575845 104575846 G T 25 GENIC homozygous 55616202 5 104575873 104575874 A G 26 GENIC homozygous 55616204 5 104575891 104575892 A T 28 GENIC homozygous 55616206 5 104576094 104576095 T - 24 GENIC homozygous 55616208 5 104576256 104576257 C T 18 GENIC homozygous 55616210 5 104576328 104576329 G GC 19 GENIC possibly homozygous 55616212 5 104577324 104577325 G A 22 GENIC homozygous 55616214 5 104577326 104577327 A G 23 GENIC homozygous 55890890 5 104577410 104577411 A G 23 GENIC homozygous 55616216 5 104577720 104577721 G A 21 GENIC homozygous 55616218 5 104577727 104577728 T C 21 GENIC homozygous 55616220 5 104578156 104578157 G C 23 GENIC homozygous 55616222 5 104578179 104578180 T A 25 GENIC homozygous 55616224 5 104578428 104578429 G A 19 GENIC homozygous 55616226 5 104578550 104578551 T G 16 GENIC homozygous 55616228 5 104578594 104578595 T C 22 GENIC homozygous 55616230 5 104578630 104578631 G T 24 GENIC homozygous 55616232 5 104578632 104578633 A C 23 GENIC homozygous 55616234 5 104578691 104578692 T G 22 GENIC homozygous 55616236 5 104578714 104578715 T C 20 GENIC homozygous 55616238 5 104578890 104578891 A C 18 GENIC homozygous 55616240 5 104578904 104578905 A G 16 GENIC homozygous 55616241 5 104579020 104579021 T C 22 GENIC homozygous 55616243 5 104579200 104579201 T C 19 GENIC homozygous 55616245 5 104579203 104579204 T C 20 GENIC homozygous 55616247 5 104579250 104579251 A C 20 GENIC homozygous 55616249 5 104579393 104579394 C T 26 GENIC homozygous 55616251 5 104579408 104579409 C T 25 GENIC homozygous 55616253 5 104579415 104579416 T C 27 GENIC homozygous 55616255 5 104579898 104579899 C T 20 GENIC homozygous 55616257 5 104580468 104580469 T C 11 GENIC homozygous 55616259 5 104580480 104580481 A G 11 GENIC homozygous 55616261 5 104580597 104580598 G A 14 GENIC homozygous 55616263 5 104581180 104581181 C T 18 GENIC homozygous 55616265 5 104581334 104581335 C T 22 GENIC homozygous 55616267 5 104581873 104581874 C T 21 GENIC homozygous 55616269 5 104582226 104582227 C T 18 GENIC homozygous 55616273 5 104582250 104582262 TGTTGTTGTTGT ------------ 6 GENIC homozygous 55616275 5 104582358 104582359 G A 16 GENIC homozygous 55616279 5 104582421 104582422 A G 16 GENIC homozygous 55616281 5 104582524 104582525 A AGAG 13 GENIC homozygous 55616283 5 104582526 104582527 T A 13 GENIC homozygous 55616285 5 104582552 104582553 C T 12 GENIC homozygous 55616287 5 104582895 104582896 T G 15 GENIC homozygous 55616289 5 104583848 104583849 A C 10 GENIC homozygous 55616291 5 104584106 104584107 C T 22 GENIC homozygous 55616293 5 104584573 104584574 C T 18 GENIC homozygous 55616295 5 104584622 104584623 A G 9 GENIC homozygous 55616297 5 104584730 104584731 C G 4 GENIC homozygous 55616299 5 104584738 104584739 C G 5 GENIC homozygous 55616301 5 104584751 104584763 AGACACACACAG ------------ 5 GENIC homozygous 56491279 5 104584785 104584786 A - 6 GENIC homozygous 56438428 5 104584788 104584795 CACACAC ------- 5 GENIC homozygous 56438432 5 104584816 104584818 AG -- 6 GENIC homozygous 55616309 5 104584931 104584932 A AC 4 GENIC homozygous 55616315 5 104584933 104584934 A AC 4 GENIC homozygous 55616317 5 104584934 104584935 G C 4 GENIC homozygous 56438436 5 104584946 104584947 G T 4 GENIC homozygous 55616319 5 104584962 104584963 C CATAG 5 GENIC homozygous 55616321 5 104584976 104584977 T C 5 GENIC homozygous 55616323 5 104584985 104584986 T C 5 GENIC homozygous 56438438 5 104584989 104584990 A C 5 GENIC homozygous 56438440 5 104585504 104585505 A G 9 GENIC homozygous 55616329 5 104586114 104586115 A T 14 GENIC homozygous 55616331 5 104586159 104586160 C T 16 GENIC homozygous 55616333 5 104586167 104586168 G A 16 GENIC homozygous 55616335 5 104586806 104586807 T C 17 GENIC homozygous 55616349 5 104586325 104586326 G A 22 GENIC homozygous 55616337 5 104586523 104586524 T G 21 GENIC homozygous 55616339 5 104586530 104586531 A G 19 GENIC homozygous 55616341 5 104586532 104586533 A G 20 GENIC homozygous 55616343 5 104586694 104586695 G A 14 GENIC homozygous 55616345 5 104586792 104586793 A ACT 17 GENIC homozygous 55616347 5 104573338 104573346 TTTGTTTG -------- 19 GENIC homozygous 57990051 5 104587027 104587028 A G 20 GENIC homozygous 55616351 5 104587135 104587136 G A 21 GENIC homozygous 55616353 5 104587210 104587239 ACAGTGAGTACACCGCATGTGGTAGCTGC ----------------------------- 25 GENIC heterozygous 56350488 5 104587283 104587284 A C 28 GENIC homozygous 55616367 5 104587658 104587659 A T 15 GENIC homozygous 55616369 5 104587751 104587752 A G 22 GENIC homozygous 55616371 5 104588145 104588146 C T 21 GENIC homozygous 55616373 5 104588584 104588610 TTTTTTTTTTTTTTTTTTTTTTTTTT -------------------------- 3 GENIC homozygous 56569124 5 104588803 104588804 G C 23 GENIC homozygous 55616377 5 104588993 104588994 A G 9 GENIC homozygous 55616379 5 104590341 104590342 A ACT 17 GENIC homozygous 55616383 5 104591024 104591025 T C 19 GENIC homozygous 55616387 5 104591174 104591175 A G 17 GENIC homozygous 55616389 5 104591452 104591453 T C 21 GENIC homozygous 55616391 5 104592149 104592150 T G 15 GENIC homozygous 55616393 5 104592616 104592617 G A 15 GENIC homozygous 55616395 5 104593229 104593230 T C 21 GENIC homozygous 55616397 5 104593279 104593280 G C 16 GENIC homozygous 55616399 5 104593416 104593417 C T 20 GENIC homozygous 55616401 5 104594150 104594151 G A 15 GENIC homozygous 55616403 5 104594440 104594441 G GA 13 GENIC homozygous 55616405 5 104594858 104594859 C T 17 GENIC homozygous 55616409 5 104595359 104595360 C T 16 GENIC homozygous 55616413 5 104596641 104596642 T C 15 GENIC homozygous 55616425 5 104597456 104597457 A G 23 GENIC homozygous 55616427 5 104597686 104597687 A G 18 GENIC homozygous 55616429 5 104597925 104597926 T C 16 GENIC homozygous 55616431 5 104599363 104599364 C G 15 GENIC homozygous 55616433 5 104600058 104600059 A G 22 GENIC homozygous 55616435 5 104600563 104600564 G A 23 GENIC homozygous 55616437 5 104600812 104600813 A C 18 GENIC homozygous 55616439 5 104601056 104601057 T C 20 GENIC homozygous 55616441 5 104601183 104601184 G A 4 GENIC homozygous 56491283 5 104601190 104601191 G GAC 9 GENIC heterozygous 57990054 5 104601200 104601201 G GAGAGAC 10 GENIC heterozygous 57990057 5 104601214 104601215 C G 10 GENIC homozygous 55616447 5 104602120 104602121 C T 18 GENIC homozygous 55616449 5 104602705 104602706 G C 27 GENIC homozygous 55616451 5 104603156 104603157 T C 21 GENIC homozygous 55616453 5 104607682 104607683 C T 17 GENIC homozygous 55616459 5 104612392 104612393 A AGAAGGAAG 11 GENIC homozygous 56491284 5 104624150 104624151 C A 17 GENIC homozygous 55616481 5 104615313 104615314 T C 11 GENIC homozygous 55616465 5 104617406 104617407 C G 14 GENIC homozygous 55616467 5 104617570 104617571 C CA 20 GENIC homozygous 55616469 5 104618002 104618003 A AAAGAAAG 10 GENIC homozygous 56491286 5 104622874 104622894 TGTGTGTATATGTGTGTGTG -------------------- 11 GENIC homozygous 55616479 5 104629985 104629986 G T 10 GENIC homozygous 55616491 5 104634401 104634402 C T 15 GENIC homozygous 55616493 5 104634600 104634601 C T 20 GENIC homozygous 55616494 5 104634845 104634851 TATGTA ------ 8 GENIC homozygous 57990060 5 104635242 104635243 T C 32 GENIC homozygous 55616497 5 104638725 104638726 A T 27 GENIC homozygous 55616501 5 104638966 104638967 C T 25 GENIC homozygous 55616502 5 104640003 104640004 T C 21 GENIC homozygous 55616504 5 104642512 104642513 C T 23 GENIC homozygous 55616505 5 104642964 104642965 C A 14 GENIC homozygous 56350494 5 104645698 104645699 A G 20 GENIC homozygous 55616508 5 104646999 104647000 A - 15 GENIC homozygous 55616509 5 104649053 104649054 G GA 16 GENIC homozygous 55616511 5 104649611 104649612 T C 18 GENIC homozygous 55616512 5 104653180 104653181 G A 21 GENIC homozygous 55616515 5 104653842 104653848 TATGAA ------ 23 GENIC homozygous 55616517 5 104653851 104653852 C A 22 GENIC homozygous 55616519 5 104653977 104653978 T C 17 GENIC homozygous 55616520 5 104655357 104655358 T C 15 GENIC homozygous 55616522 5 104657651 104657652 T C 18 GENIC homozygous 55616525 5 104659904 104659905 A - 12 GENIC homozygous 55616526 5 104663862 104663863 C A 25 GENIC homozygous 55616527 5 104666444 104666445 C CT 11 GENIC homozygous 55616528 5 104667331 104667332 A - 20 GENIC homozygous 55616529 5 104670372 104670373 A G 18 GENIC homozygous 55616531 5 104675524 104675525 C T 21 GENIC homozygous 55616533