chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 54851041 54851042 G A 5 GENIC homozygous 55381599 5 54851226 54851227 A C 5 GENIC homozygous 55381600 5 54852846 54852847 A G 7 GENIC possibly homozygous 55381601 5 54853721 54853722 T C 1 GENIC homozygous 55381602 5 54854070 54854071 A G 6 GENIC homozygous 55381603 5 54854477 54854478 C T 9 GENIC homozygous 55381604 5 54855368 54855369 T C 7 GENIC homozygous 55381605 5 54857600 54857601 T A 7 GENIC homozygous 55381606 5 54857922 54857923 G A 5 GENIC homozygous 55381607 5 54858301 54858302 T C 5 GENIC homozygous 55381609 5 54858950 54858951 A T 2 GENIC homozygous 55381610 5 54860165 54860166 T TA 6 GENIC homozygous 57037752 5 54860219 54860231 AAAGCAAAGATC ------------ 5 GENIC homozygous 55381611 5 54860650 54860676 ATATATATATATTTATATTTATATAT -------------------------- 7 GENIC homozygous 56613430 5 54860814 54860815 T C 4 GENIC homozygous 55381615 5 54860873 54860874 T C 1 GENIC homozygous 55381616 5 54861713 54861714 C A 5 GENIC homozygous 55381617 5 54862496 54862497 A C 2 GENIC homozygous 55381620 5 54863463 54863464 G A 6 GENIC homozygous 57037754 5 54863488 54863489 A G 6 GENIC homozygous 55381626 5 54863589 54863590 C T 5 GENIC homozygous 55381627 5 54863946 54863947 A AG 3 GENIC homozygous 55381628 5 54864108 54864109 C G 6 GENIC homozygous 55381632 5 54863982 54863983 C G 2 GENIC homozygous 55381629 5 54863985 54863986 T C 2 GENIC homozygous 55381630 5 54864174 54864187 AAAAAAAAAAAAA ------------- 3 GENIC homozygous 55381633 5 54864218 54864219 A T 4 GENIC homozygous 55381635 5 54865003 54865004 T C 5 GENIC homozygous 55381636 5 54865218 54865219 T C 1 GENIC homozygous 55381637 5 54865467 54865468 T C 4 GENIC homozygous 55381638 5 54865573 54865574 A G 8 GENIC homozygous 55381639 5 54865682 54865683 T C 12 GENIC homozygous 55381640 5 54865883 54865884 T C 10 GENIC homozygous 55381641 5 54866583 54866609 TGTGTGTGTGTGTGTGTGTGTGTGTG -------------------------- 3 GENIC homozygous 56613432 5 54866718 54866719 A C 8 GENIC homozygous 55381642 5 54867535 54867536 A AC 6 GENIC homozygous 55381643 5 54867539 54867540 C A 6 GENIC homozygous 56543098 5 54867644 54867645 T C 5 GENIC homozygous 55381644 5 54869850 54869851 C CT 5 GENIC homozygous 55381650 5 54867646 54867647 T C 6 GENIC homozygous 55381645 5 54867840 54867841 A G 6 GENIC homozygous 55381646 5 54867865 54867866 A G 7 GENIC homozygous 55381647 5 54868785 54868786 A T 6 GENIC homozygous 55381648 5 54869187 54869188 T - 2 GENIC homozygous 55381649 5 54870541 54870542 A G 7 GENIC homozygous 55381653 5 54870968 54870969 G GTT 7 GENIC homozygous 55381654 5 54871206 54871207 C T 6 GENIC homozygous 55381655 5 54871382 54871383 A G 14 GENIC homozygous 55381656 5 54872059 54872060 T TACACACACACAC 4 GENIC heterozygous 56543099 5 54872087 54872088 C CACACACACACACACACACA 6 GENIC heterozygous 56543100 5 54872115 54872116 A G 5 GENIC homozygous 55381657 5 54872339 54872346 AAAAAAA ------- 9 GENIC homozygous 55381658 5 54872522 54872523 A G 11 GENIC homozygous 55381659 5 54872577 54872580 GCT --- 10 GENIC homozygous 55381660 5 54873341 54873342 T C 4 GENIC homozygous 55381661 5 54873458 54873459 C A 4 GENIC homozygous 55381663 5 54875021 54875022 T - 2 GENIC homozygous 55381668 5 54873915 54873916 C T 4 GENIC homozygous 55381664 5 54874039 54874040 G C 5 GENIC homozygous 55381665 5 54874146 54874147 A C 4 GENIC homozygous 55381666 5 54874294 54874295 G A 5 GENIC homozygous 55381667 5 54870014 54870022 TATATATA -------- 5 GENIC homozygous 57839846 5 54875432 54875433 C T 6 GENIC homozygous 55381671 5 54875218 54875219 A G 4 GENIC homozygous 55381669 5 54875219 54875220 T C 4 GENIC homozygous 55381670 5 54875579 54875580 C CA 6 GENIC heterozygous 55381672 5 54875579 54875580 C CAA 6 GENIC heterozygous 55877797 5 54876339 54876340 C T 2 GENIC homozygous 55381674 5 54876641 54876642 G A 14 GENIC homozygous 55381675 5 54877077 54877078 C T 8 GENIC homozygous 55381676 5 54877131 54877132 T C 3 GENIC homozygous 55381677 5 54877191 54877192 T TC 4 GENIC homozygous 55381678 5 54877342 54877343 T C 7 GENIC homozygous 55381679 5 54877720 54877721 G GA 8 GENIC homozygous 55381680 5 54877824 54877825 C T 22 GENIC homozygous 55381681 5 54877872 54877873 C T 15 GENIC homozygous 55381682 5 54877882 54877883 A G 15 GENIC homozygous 55381683 5 54878230 54878231 G A 5 GENIC homozygous 55381685 5 54878998 54878999 T TGC 5 GENIC homozygous 55381686 5 54879001 54879002 A ACGCACGCACGCACG 4 GENIC homozygous 57839848 5 54879326 54879327 A - 14 GENIC homozygous 55381689 5 54879362 54879363 A G 13 GENIC homozygous 55381690 5 54879615 54879616 C T 15 GENIC homozygous 55381691 5 54880078 54880079 C A 8 GENIC homozygous 55381692 5 54880121 54880122 A ATAT 5 GENIC homozygous 55381693 5 54880260 54880261 G A 10 GENIC homozygous 55381694 5 54880405 54880406 G C 7 GENIC homozygous 55381695 5 54880478 54880479 C G 6 GENIC homozygous 55381696 5 54880763 54880764 G A 5 GENIC homozygous 55381697 5 54880889 54880890 A - 5 GENIC homozygous 55381698 5 54880984 54880985 C - 8 GENIC homozygous 55381699 5 54880988 54880989 A - 8 GENIC homozygous 55381700 5 54880990 54880995 GTGTA ----- 8 GENIC homozygous 55381701 5 54880998 54880999 T G 8 GENIC homozygous 56613434 5 54881000 54881007 TAATTTT ------- 9 GENIC homozygous 55381702 5 54881008 54881009 A T 8 GENIC homozygous 56613436 5 54881339 54881340 T TA 5 GENIC heterozygous 56543103 5 54881845 54881846 T C 5 GENIC homozygous 55381703 5 54882380 54882381 C T 13 GENIC homozygous 55381704 5 54883095 54883096 G A 11 GENIC homozygous 55381705 5 54883219 54883220 T C 5 GENIC homozygous 55381706 5 54884207 54884208 A G 7 GENIC homozygous 55381707 5 54884356 54884357 A G 9 GENIC homozygous 55381708 5 54884633 54884634 A G 7 GENIC homozygous 55381709 5 54885073 54885074 T C 6 GENIC homozygous 55381710 5 54885540 54885541 G GT 8 GENIC heterozygous 55381711 5 54885978 54885979 A C 4 GENIC homozygous 55381712 5 54887096 54887097 T C 4 GENIC homozygous 55381713 5 54888168 54888169 G A 7 GENIC homozygous 57037756 5 54888872 54888873 C T 5 GENIC homozygous 55381714 5 54889365 54889366 C A 4 GENIC homozygous 55381715 5 54889521 54889523 AA -- 6 GENIC homozygous 55381716 5 54890447 54890448 A AT 8 GENIC homozygous 55381717 5 54891183 54891184 A C 3 GENIC homozygous 55381718 5 54891352 54891353 C T 3 GENIC homozygous 55381719 5 54891425 54891426 C T 5 GENIC homozygous 55381720 5 54891696 54891697 C T 6 GENIC homozygous 55381721 5 54891952 54891953 G A 7 GENIC homozygous 55381722 5 54893126 54893127 G A 7 GENIC homozygous 55381723 5 54893145 54893146 T C 6 GENIC homozygous 55381724 5 54894937 54894938 A AAAAAAAG 3 GENIC homozygous 55381725 5 54895402 54895403 C CAG 14 GENIC homozygous 55381726 5 54895651 54895652 T TAA 5 GENIC heterozygous 55381727 5 54895651 54895652 T TA 5 GENIC heterozygous 55381728 5 54896062 54896063 A G 3 GENIC homozygous 55381729 5 54896572 54896573 T TAA 8 GENIC homozygous 55381732 5 54898189 54898190 A ACT 6 GENIC homozygous 55381733 5 54898561 54898562 G - 7 GENIC homozygous 55381734 5 54899233 54899234 A G 11 GENIC homozygous 55381735 5 54899546 54899547 G T 7 GENIC homozygous 55381736 5 54901608 54901609 C T 8 GENIC homozygous 55381738 5 54902326 54902327 A G 14 GENIC homozygous 55381739 5 54902863 54902864 G A 5 GENIC homozygous 55381740 5 54903542 54903543 C CAACAAACA 3 GENIC homozygous 55381741 5 54903783 54903784 G A 4 GENIC homozygous 55381742 5 54904082 54904083 A G 4 GENIC homozygous 55381743 5 54904729 54904731 AA -- 6 GENIC homozygous 55381744 5 54904734 54904735 A G 6 GENIC homozygous 55381745 5 54904775 54904776 A G 10 GENIC homozygous 55381746 5 54904852 54904853 C T 15 GENIC possibly homozygous 55381747 5 54904887 54904888 T C 6 GENIC homozygous 57037758 5 54904987 54904988 T C 12 GENIC homozygous 55381749 5 54905017 54905018 G A 15 GENIC homozygous 55381750 5 54905196 54905197 T G 8 GENIC homozygous 55381751 5 54905316 54905317 C T 7 GENIC homozygous 57037760 5 54905361 54905362 A G 6 GENIC homozygous 55381752 5 54905375 54905384 AAAAAAAAA --------- 3 GENIC homozygous 57075986 5 54905799 54905800 G A 7 GENIC homozygous 55381755 5 54906205 54906206 T C 3 GENIC homozygous 55381756 5 54907040 54907041 A G 9 GENIC homozygous 55381757 5 54908357 54908358 C CATAAGATTCATATCTATCA 9 GENIC homozygous 55381758 5 54908783 54908784 C G 1 GENIC homozygous 55381760 5 54910483 54910484 T - 6 GENIC homozygous 55381762 5 54910745 54910746 G A 5 GENIC homozygous 55381763 5 54910869 54910870 C T 6 GENIC homozygous 55381764 5 54911088 54911089 A T 10 GENIC homozygous 55381765 5 54911196 54911197 T C 8 GENIC homozygous 55381766 5 54911474 54911475 A C 11 GENIC homozygous 55381767 5 54911504 54911505 C A 10 GENIC homozygous 55381768 5 54911666 54911667 G GTGCGCACTCAGGCAGGCGGACATTCAGGCAGA 4 GENIC homozygous 56567438 5 54911689 54911690 T TTCAGGCAGGTGCACAC 2 GENIC homozygous 56613442 5 54911826 54911827 T C 11 GENIC homozygous 55381775 5 54911827 54911828 G A 11 GENIC homozygous 55381776 5 54911892 54911893 C T 14 GENIC homozygous 55381777 5 54911904 54911905 T C 14 GENIC homozygous 55381778 5 54911908 54911909 A C 14 GENIC homozygous 55381779 5 54912191 54912192 T G 7 GENIC homozygous 55381780 5 54912663 54912664 C A 17 GENIC homozygous 55381781 5 54912809 54912810 G C 8 GENIC homozygous 55381782 5 54912975 54912976 G A 12 GENIC homozygous 55381783 5 54913037 54913038 A AT 10 GENIC homozygous 55381784 5 54913771 54913772 G GGGAGGGA 6 GENIC homozygous 55381787 5 54913794 54913800 GAGGGG ------ 7 GENIC homozygous 55381788 5 54914027 54914028 G A 16 GENIC homozygous 55381789 5 54914313 54914314 A G 6 GENIC homozygous 55381790 5 54914870 54914871 G A 6 GENIC homozygous 55381791 5 54914874 54914875 C CACTGCTGCCTATA 6 GENIC homozygous 55381792 5 54915386 54915387 G T 9 GENIC homozygous 55381794 5 54915413 54915414 A AGGAAC 9 GENIC homozygous 55381795 5 54915748 54915750 CC -- 7 GENIC heterozygous 56416527 5 54915750 54915754 AAAA ---- 5 GENIC heterozygous 55381799 5 54915860 54915861 A G 14 GENIC homozygous 55381800 5 54916571 54916572 C CTA 6 GENIC homozygous 55381801 5 54916714 54916715 A C 9 GENIC homozygous 55381802 5 54917018 54917019 G A 10 GENIC homozygous 55381803 5 54917207 54917211 TTTG ---- 4 GENIC homozygous 55381804 5 54917458 54917459 C T 10 GENIC homozygous 55381805 5 54917863 54917864 T A 9 GENIC homozygous 55381806 5 54918926 54918927 G A 9 GENIC homozygous 55381807 5 54920620 54920621 T TCCCAGGCCCCAGGC 3 GENIC homozygous 55381814 5 54919024 54919025 T C 7 GENIC homozygous 55381808 5 54919177 54919178 C T 12 GENIC homozygous 55381809 5 54919231 54919232 G GCAGTTTTGCTGTGT 13 GENIC homozygous 55381810 5 54919495 54919496 T G 11 GENIC homozygous 55381811 5 54919669 54919673 ACCT ---- 4 GENIC homozygous 55381812 5 54920177 54920178 C - 4 GENIC homozygous 55381813 5 54915531 54915649 AAAAGTTATTTCGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAAAAAAAAAAAGAACAAAAAAAAAA ---------------------------------------------------------------------------------------------------------------------- 7 GENIC homozygous 56560167 5 54921608 54921609 C A 12 GENIC homozygous 55381816 5 54922246 54922247 C A 10 GENIC homozygous 55381817 5 54922317 54922318 C T 8 GENIC homozygous 55381818 5 54922666 54922667 T A 5 GENIC homozygous 55381819 5 54922698 54922699 G GA 5 GENIC heterozygous 55381820 5 54922712 54922713 C CAA 7 GENIC heterozygous 55381821 5 54922712 54922713 C CA 7 GENIC heterozygous 55381822 5 54922784 54922785 T C 8 GENIC homozygous 55381823 5 54922860 54922861 C A 5 GENIC homozygous 55381824 5 54923430 54923431 A C 10 GENIC homozygous 55381827 5 54923832 54923833 A G 6 GENIC homozygous 55381828 5 54924063 54924064 G GA 8 GENIC homozygous 55381829 5 54924139 54924140 C CT 6 GENIC homozygous 55381830 5 54924340 54924341 C - 9 GENIC homozygous 55381831 5 54924395 54924396 T TA 5 GENIC heterozygous 55877801 5 54924452 54924453 A - 5 GENIC homozygous 55381833 5 54924707 54924708 A G 7 GENIC homozygous 55381834 5 54925317 54925318 A G 8 GENIC homozygous 55381835 5 54926328 54926329 A C 6 GENIC homozygous 55381836 5 54926873 54926874 C T 8 GENIC homozygous 55381837 5 54926927 54926928 G C 7 GENIC homozygous 55381838 5 54927804 54927805 T C 12 GENIC homozygous 55381840 5 54928261 54928262 G C 5 GENIC homozygous 55381841 5 54928601 54928602 T C 9 GENIC homozygous 55381842 5 54928793 54928794 C T 5 GENIC homozygous 55381843 5 54928843 54928844 C G 7 GENIC homozygous 55381844 5 54928851 54928852 T C 8 GENIC homozygous 55381845 5 54929033 54929034 A AAGAGACACTGGGTTTGACCCTC 3 GENIC homozygous 55381846 5 54929132 54929133 A G 1 GENIC homozygous 55381848 5 54929227 54929228 A - 8 GENIC homozygous 55381849 5 54929444 54929445 G GACACACAC 2 GENIC homozygous 56567446 5 54929738 54929739 C - 3 GENIC heterozygous 55381850 5 54930160 54930162 AA -- 8 GENIC homozygous 55381851