chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 53143674 53143675 T C 20 GENIC homozygous 56008715 5 53143701 53143702 T C 21 GENIC homozygous 55378214 5 53144786 53144787 A - 14 GENIC homozygous 56008717 5 53145169 53145170 A G 28 GENIC homozygous 56008718 5 53146199 53146200 G GAA 19 GENIC possibly homozygous 56008719 5 53146735 53146736 C CTT 1 GENIC homozygous 55378216 5 53146806 53146807 A G 9 GENIC homozygous 56008720 5 53149413 53149414 G GAAA 10 GENIC heterozygous 56008722 5 53150834 53150835 T C 23 GENIC homozygous 56008724 5 53152485 53152486 T TA 7 GENIC possibly homozygous 55378219 5 53153038 53153039 G A 34 GENIC homozygous 55378220 5 53155462 53155463 T C 26 GENIC homozygous 56008727 5 53156029 53156030 T G 20 GENIC homozygous 56008728 5 53156117 53156129 ATTTATTTATTT ------------ 4 GENIC homozygous 56008730 5 53156156 53156157 C CT 7 GENIC homozygous 56008734 5 53156940 53156941 A AT 13 GENIC heterozygous 55378221 5 53156941 53156942 T - 13 GENIC heterozygous 55378222 5 53157990 53157991 A C 23 GENIC homozygous 55378223 5 53158315 53158316 T TA 13 GENIC heterozygous 56008736 5 53158997 53158998 A G 27 GENIC homozygous 55378224 5 53161814 53161816 GC -- 23 GENIC homozygous 56008738 5 53161820 53161821 G - 22 GENIC heterozygous 56008739 5 53161822 53161823 G - 22 GENIC possibly homozygous 56008741 5 53161825 53161830 TGTGT ----- 21 GENIC possibly homozygous 56008742 5 53162016 53162017 C CGTGTGTGTGTGTGTAGTGGTGTGTGTGTGCATGTGTGTGTAGTGGTGTGCACGT 8 GENIC possibly homozygous 56415892 5 53162117 53162119 GT -- 16 GENIC homozygous 56008749 5 53162201 53162202 A ATG 16 GENIC homozygous 55378226 5 53162234 53162235 G GGTGTGTGTGT 4 GENIC heterozygous 56415894 5 53164687 53164688 A T 33 GENIC homozygous 56008751 5 53166034 53166035 C CTCTCTA 5 GENIC heterozygous 55877495 5 53166034 53166035 C CTCTATA 5 GENIC heterozygous 56415896 5 53166075 53166081 TGTGTG ------ 4 GENIC homozygous 56613090 5 53166888 53166889 A G 42 GENIC homozygous 55378232 5 53167607 53167608 T TATAC 12 GENIC homozygous 56578791 5 53168774 53168775 A G 31 GENIC homozygous 56008754 5 53169520 53169521 A G 21 GENIC homozygous 56008755 5 53170158 53170159 C G 24 GENIC homozygous 55378233 5 53170548 53170549 A ATCTATCTGTCTGTCTATCTATC 7 GENIC possibly homozygous 56415906 5 53170536 53170537 G A 27 GENIC homozygous 56347354 5 53170542 53170543 A ATTGTCTGTCTATCTATCTATC 10 GENIC heterozygous 56415900 5 53170544 53170545 A ATCTAT 9 GENIC possibly homozygous 56415902 5 53170544 53170545 A ATTGTCTGTCTATCTATCTATC 9 GENIC heterozygous 56578792 5 53170546 53170547 A ATCTATCTATC 8 GENIC possibly homozygous 56415904 5 53170546 53170547 A ATCTAT 8 GENIC heterozygous 56578793 5 53146199 53146200 G GA 19 GENIC heterozygous 56543010 5 53161823 53161830 TGTGTGT ------- 21 GENIC heterozygous 56543011 5 53149413 53149414 G GAA 10 GENIC heterozygous 56487538 5 53151776 53151777 T TAC 2 GENIC homozygous 57240077 5 53162234 53162235 G GGTGTGTGT 4 GENIC heterozygous 56527181 5 53170548 53170549 A ATCTATCTATC 7 GENIC heterozygous 56578794 5 53170550 53170551 A ATCTATCTATCCATCTATCT 7 GENIC heterozygous 56415908 5 53170550 53170551 A ATCT 7 GENIC heterozygous 56415910 5 53170550 53170551 A ATCTATCT 7 GENIC heterozygous 56578795 5 53170551 53170552 G GTCTGTCTATCTATCTATCCATCTATCATCTATCTATCCATCTATCTGTC 7 GENIC heterozygous 56415912 5 53170551 53170552 G GTCATCTATCTATCCATCTATCTGTCTGTCTATCTATCTATCCATCTATCATCTATCTATCCATCTATCTGTC 7 GENIC heterozygous 56415914 5 53170551 53170552 G GTCTGTCTATCTATCCATCTGTCATCTATCTATCCATCTATCTGTCTGTCTATCTATCTATCCATCTATCATCTATCTATCCATCTATCTGTC 7 GENIC heterozygous 56578796 5 53170554 53170555 A T 41 GENIC homozygous 55378236 5 53171835 53171840 CCCTT ----- 24 GENIC homozygous 55378242 5 53172092 53172093 C - 23 GENIC homozygous 55378243 5 53172093 53172094 T A 23 GENIC homozygous 56347355 5 53172692 53172693 A G 22 GENIC homozygous 56008760 5 53173115 53173116 T C 18 GENIC homozygous 57240079 5 53173260 53173263 GTG --- 2 GENIC homozygous 57240081 5 53173304 53173305 G A 12 GENIC homozygous 57240083 5 53174010 53174011 A G 46 GENIC homozygous 55378248 5 53174190 53174191 T TA 29 GENIC homozygous 57240085 5 53175379 53175380 T C 21 GENIC homozygous 57240087 5 53175662 53175670 TCCATCCA -------- 12 GENIC homozygous 56008770 5 53175803 53175804 C G 24 GENIC homozygous 55378250 5 53176142 53176144 AG -- 16 GENIC heterozygous 56543013 5 53176387 53176393 AACAAC ------ 20 GENIC heterozygous 55378251 5 53176390 53176393 AAC --- 20 GENIC possibly homozygous 56008775 5 53177286 53177287 G GT 27 GENIC possibly homozygous 55378252 5 53177748 53177749 G GTTTT 3 GENIC heterozygous 56613101 5 53177862 53177863 T C 20 GENIC homozygous 55378253 5 53177875 53177876 A G 20 GENIC homozygous 56008778 5 53177888 53177889 G - 17 GENIC homozygous 55378254 5 53177889 53177890 C A 17 GENIC homozygous 56347356 5 53177996 53177997 G T 22 GENIC homozygous 55378255 5 53178107 53178108 G A 25 GENIC homozygous 56008780 5 53179133 53179134 A G 26 GENIC homozygous 56008781 5 53179872 53179873 A T 27 GENIC homozygous 56008783 5 53179942 53179943 A C 20 GENIC homozygous 56008785 5 53179978 53179996 TGTGTGTGTGTGTGTGTG ------------------ 16 GENIC heterozygous 56415926 5 53179980 53179996 TGTGTGTGTGTGTGTG ---------------- 16 GENIC heterozygous 56415928 5 53180272 53180273 T TA 17 GENIC homozygous 55378259 5 53180531 53180532 T C 25 GENIC homozygous 56008786 5 53181163 53181164 G A 31 GENIC homozygous 56008788 5 53181571 53181572 T G 32 GENIC homozygous 56008790 5 53182419 53182420 T TG 19 GENIC heterozygous 55378260 5 53182419 53182420 T TGG 19 GENIC possibly homozygous 56008791 5 53183379 53183380 C T 30 GENIC homozygous 56008793 5 53184384 53184385 G A 37 GENIC homozygous 55378261 5 53185535 53185536 G A 36 GENIC homozygous 55378263 5 53186393 53186394 T - 3 GENIC heterozygous 56527183 5 53187508 53187509 A C 29 GENIC homozygous 56008795 5 53188513 53188514 A - 17 GENIC homozygous 55378265 5 53188858 53188859 C T 41 GENIC homozygous 56008796 5 53190185 53190186 T C 27 GENIC homozygous 56008800 5 53191268 53191269 T - 16 GENIC homozygous 56008802 5 53191374 53191375 T A 30 GENIC homozygous 55378267 5 53192436 53192437 C G 21 GENIC homozygous 56008804 5 53193060 53193061 C A 37 GENIC homozygous 56008805 5 53193123 53193124 A G 28 GENIC homozygous 56008807 5 53193751 53193752 C T 31 GENIC homozygous 56008809 5 53193927 53193928 C CT 24 GENIC homozygous 56008811 5 53194221 53194222 T C 27 GENIC homozygous 55378268 5 53194259 53194260 T C 26 GENIC homozygous 56008813 5 53194540 53194541 T C 19 GENIC homozygous 56008815 5 53194887 53194888 T G 22 GENIC homozygous 56008817 5 53195265 53195266 G A 25 GENIC homozygous 56008819 5 53195311 53195312 C T 29 GENIC homozygous 55378270 5 53195879 53195880 G A 23 GENIC possibly homozygous 56008820 5 53196495 53196496 T C 21 GENIC homozygous 56008822 5 53196680 53196681 A G 27 GENIC homozygous 56008823 5 53196933 53196934 C G 18 GENIC homozygous 56008825 5 53196939 53196940 C T 17 GENIC homozygous 56008827 5 53196966 53196967 C - 10 GENIC homozygous 55378271 5 53197009 53197010 G - 3 GENIC homozygous 56008829 5 53197800 53197801 A G 18 GENIC homozygous 55877502 5 53198412 53198413 C A 18 GENIC homozygous 56008840 5 53200377 53200378 C T 15 GENIC homozygous 56008845 5 53198546 53198547 C - 10 GENIC heterozygous 55378275 5 53199917 53199918 C A 33 GENIC homozygous 56008842 5 53200020 53200021 T - 28 GENIC homozygous 55378277 5 53200057 53200058 A G 28 GENIC homozygous 56008844 5 53200325 53200335 TGTGTGTGTG ---------- 13 GENIC heterozygous 56415932 5 53200327 53200335 TGTGTGTG -------- 13 GENIC heterozygous 56543014 5 53170662 53170663 G GTCTGTCTGTCTA 4 GENIC homozygous 56584932 5 53173150 53173222 GTGTGCGTGTGCGTGCGTGTGTGTGTGTGTGTATGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGC ------------------------------------------------------------------------ 6 GENIC homozygous 56749621 5 53200472 53200473 C CG 24 GENIC homozygous 56008847 5 53200541 53200542 C T 25 GENIC homozygous 56008849 5 53200994 53200995 A C 36 GENIC homozygous 56008851 5 53201729 53201730 A G 24 GENIC homozygous 56008853 5 53202891 53202892 C T 23 GENIC homozygous 55378279 5 53203781 53203782 C T 23 GENIC homozygous 56008855 5 53203996 53203997 G GT 30 GENIC homozygous 56008856 5 53204388 53204412 AAACAAACAAACAAACAAACAAAC ------------------------ 19 GENIC homozygous 56487539 5 53204834 53204835 T A 16 GENIC homozygous 55378281 5 53205516 53205517 G - 31 GENIC homozygous 55378283 5 53205872 53205874 TT -- 11 GENIC possibly homozygous 56008858 5 53205966 53205967 T C 24 GENIC homozygous 56008860 5 53207683 53207684 T C 13 GENIC homozygous 55378284 5 53208502 53208503 C CTTTT 20 GENIC homozygous 56008862 5 53209623 53209624 C A 29 GENIC homozygous 56008864 5 53211837 53211838 A AACAC 15 GENIC heterozygous 56008871 5 53212240 53212241 T - 2 GENIC homozygous 56008873 5 53212603 53212604 A T 31 GENIC homozygous 56008875 5 53213821 53213822 A ATTAT 47 GENIC homozygous 55378285 5 53214006 53214007 T TTGTGTGTG 7 GENIC heterozygous 56487540 5 53214006 53214007 T TTGTGTGTGTG 7 GENIC heterozygous 56572343 5 53215319 53215320 A G 26 GENIC homozygous 56008879 5 53215358 53215359 C G 30 GENIC homozygous 56008881 5 53215854 53215855 A G 32 GENIC homozygous 56008882 5 53216313 53216314 C T 24 GENIC homozygous 56008884 5 53216703 53216704 C T 30 GENIC homozygous 56008888 5 53218014 53218017 AAA --- 24 GENIC homozygous 56008890 5 53218565 53218566 T A 29 GENIC homozygous 56008892 5 53220480 53220481 T C 24 GENIC homozygous 55378289 5 53220997 53220998 T G 26 GENIC homozygous 56008894 5 53221145 53221146 A - 19 GENIC homozygous 56008896 5 53221208 53221209 T - 18 GENIC homozygous 55378290 5 53221327 53221329 CA -- 5 GENIC homozygous 56673772 5 53221705 53221707 TG -- 19 GENIC homozygous 55378291 5 53221717 53221719 TG -- 3 GENIC homozygous 56578797 5 53222036 53222037 G GT 21 GENIC possibly homozygous 56008898 5 53222899 53222900 C T 33 GENIC homozygous 56008900 5 53223220 53223221 G - 28 GENIC homozygous 56008902 5 53223457 53223458 T A 18 GENIC homozygous 56008904 5 53223690 53223691 A C 27 GENIC homozygous 56008905 5 53225098 53225099 T C 24 GENIC homozygous 56008907 5 53225171 53225172 A G 21 GENIC homozygous 55378292 5 53225347 53225355 TCTGTCTG -------- 26 GENIC homozygous 56008909 5 53226696 53226697 A T 22 GENIC homozygous 56008913 5 53226703 53226704 T - 18 GENIC homozygous 56008915 5 53227388 53227389 C T 26 GENIC homozygous 56008917 5 53227717 53227718 G C 31 GENIC homozygous 55378295 5 53228588 53228589 T C 29 GENIC homozygous 55378296 5 53229332 53229333 A G 23 GENIC homozygous 56008919 5 53229384 53229385 A G 21 GENIC homozygous 56008921 5 53229886 53229887 C CGT 9 GENIC heterozygous 56487541 5 53229887 53229889 GT -- 9 GENIC possibly homozygous 56415940 5 53229937 53229938 A T 22 GENIC homozygous 56008923 5 53230265 53230266 G C 19 GENIC homozygous 56008924 5 53232799 53232800 T G 14 GENIC homozygous 56008926 5 53233173 53233174 A AACACAC 12 GENIC possibly homozygous 56415942 5 53233376 53233377 C A 16 GENIC homozygous 56008927 5 53234204 53234205 C CT 22 GENIC homozygous 56008928 5 53234453 53234454 C A 30 GENIC homozygous 56008930 5 53238104 53238105 A G 26 GENIC homozygous 56008932 5 53240932 53240933 T A 19 GENIC homozygous 56008934 5 53241933 53241938 TTGTT ----- 28 GENIC homozygous 55378303 5 53241961 53241962 C T 33 GENIC homozygous 56008936 5 53242552 53242553 A T 43 GENIC homozygous 56008937 5 53242639 53242640 T C 30 GENIC homozygous 56008939 5 53243493 53243494 G GAA 20 GENIC homozygous 55378304 5 53245544 53245546 CC -- 5 GENIC homozygous 56415944 5 53246268 53246269 G GGTAT 10 GENIC possibly homozygous 56567314 5 53246485 53246486 T G 22 GENIC homozygous 56008945 5 53246549 53246555 TGTGTG ------ 5 GENIC heterozygous 56415950 5 53246551 53246555 TGTG ---- 5 GENIC heterozygous 56613112 5 53246740 53246741 T TTTTTTTC 5 GENIC heterozygous 56415952 5 53246778 53246780 GG -- 6 GENIC heterozygous 56487542 5 53246860 53246861 C CT 18 GENIC homozygous 55378311 5 53248062 53248063 A AAAAC 31 GENIC homozygous 56008949 5 53248468 53248469 C T 35 GENIC homozygous 56008951 5 53249133 53249134 G A 27 GENIC homozygous 56008952 5 53249583 53249584 G GGCACTGCATGGTCTGTGTGTGAGGGCTCACAC 19 GENIC homozygous 56347358 5 53251835 53251836 A AT 10 GENIC homozygous 56008954 5 53253123 53253124 T G 21 GENIC homozygous 55378318 5 53253655 53253656 G A 28 GENIC homozygous 56008955 5 53254720 53254721 A G 16 GENIC homozygous 56008957 5 53256049 53256050 A C 24 GENIC homozygous 56008958 5 53257326 53257327 A G 20 GENIC homozygous 55378320 5 53257339 53257340 C CTGTG 7 GENIC possibly homozygous 56008962 5 53257494 53257495 C T 28 GENIC homozygous 56008964 5 53257590 53257591 A G 25 GENIC homozygous 56008966 5 53257682 53257683 A G 30 GENIC homozygous 56008968 5 53258502 53258503 G T 16 GENIC homozygous 56008972 5 53258595 53258596 T TGTCCGTCCGTCC 23 GENIC homozygous 55378324 5 53258886 53258887 G C 30 GENIC homozygous 55378325 5 53259726 53259727 G C 21 GENIC homozygous 56008974 5 53260751 53260753 AA -- 13 GENIC heterozygous 56415954 5 53260752 53260753 A - 13 GENIC heterozygous 56415956 5 53262831 53262832 G A 22 GENIC homozygous 55378328 5 53264009 53264010 G A 27 GENIC homozygous 56008976 5 53265218 53265219 C A 19 GENIC homozygous 56008978 5 53265246 53265247 T - 15 GENIC homozygous 56008980 5 53266705 53266706 A AT 6 GENIC homozygous 56415958 5 53266974 53266975 C - 14 GENIC heterozygous 56415960 5 53267263 53267264 G A 24 GENIC homozygous 56008986 5 53267754 53267755 A G 29 GENIC homozygous 55378332 5 53268430 53268431 A G 26 GENIC homozygous 55378333 5 53268606 53268607 T TTC 4 GENIC heterozygous 56487544 5 53268625 53268626 T TC 5 GENIC heterozygous 55378334 5 53270343 53270344 G A 26 GENIC possibly homozygous 56008990 5 53272198 53272199 G A 26 GENIC homozygous 56008992 5 53272967 53272968 C T 34 GENIC homozygous 56008993 5 53274261 53274262 G A 26 GENIC homozygous 55378336 5 53274356 53274357 G A 28 GENIC homozygous 56008995 5 53274422 53274423 G A 34 GENIC homozygous 56008997 5 53277324 53277325 A T 33 GENIC homozygous 56008999 5 53278925 53278943 GTGTGTGTGTGTGTGTGT ------------------ 3 GENIC heterozygous 56415962 5 53278927 53278943 GTGTGTGTGTGTGTGT ---------------- 3 GENIC heterozygous 56415964 5 53281882 53281884 AG -- 21 GENIC homozygous 55378340 5 53282377 53282378 A G 23 GENIC homozygous 56009001 5 53283118 53283119 A AG 28 GENIC homozygous 56009003 5 53285174 53285175 A G 26 GENIC homozygous 55378342 5 53289807 53289808 T - 9 GENIC homozygous 56009007 5 53289867 53289868 A AT 14 GENIC homozygous 55378346 5 53290429 53290430 C CT 22 GENIC heterozygous 56527189 5 53290433 53290434 G T 23 GENIC heterozygous 56009009 5 53293418 53293419 G A 30 GENIC homozygous 56009012 5 53297380 53297381 A - 32 GENIC homozygous 56009014 5 53298059 53298060 T TAAA 18 GENIC heterozygous 56009016 5 53298059 53298060 T TAA 18 GENIC heterozygous 56415966 5 53298059 53298060 T TAAAA 18 GENIC heterozygous 56543015 5 53298175 53298176 G A 28 GENIC homozygous 55378348 5 53298614 53298615 A C 17 GENIC homozygous 56009018 5 53298715 53298716 G GT 10 GENIC heterozygous 55378349 5 53298736 53298737 T C 22 GENIC possibly homozygous 55378351 5 53300211 53300212 T C 10 GENIC homozygous 56009020 5 53300247 53300248 A T 18 GENIC homozygous 55378352 5 53300250 53300251 A T 10 GENIC homozygous 55877516 5 53300318 53300319 C G 36 GENIC homozygous 56009022 5 53300920 53300921 T C 29 GENIC homozygous 56009024 5 53302528 53302529 C CTGTGTGTGTGTGTG 7 GENIC homozygous 56543016 5 53305609 53305619 GTGTGTGTGT ---------- 18 GENIC possibly homozygous 56613114 5 53306804 53306805 T C 32 GENIC homozygous 55378357 5 53307476 53307480 GTGT ---- 6 GENIC homozygous 56415974 5 53308824 53308825 C G 34 GENIC homozygous 56009030 5 53310419 53310420 T TA 21 GENIC homozygous 55378361 5 53310740 53310741 T C 21 GENIC homozygous 55378362 5 53311432 53311433 A G 21 GENIC homozygous 56009032 5 53312561 53312569 TCCATCCA -------- 10 GENIC homozygous 56415976 5 53314639 53314655 CACACACACACACACA ---------------- 8 GENIC heterozygous 56415978 5 53314641 53314655 CACACACACACACA -------------- 8 GENIC heterozygous 56527192 5 53315233 53315245 ACCACACACACA ------------ 5 GENIC homozygous 57240089 5 53315267 53315271 ACAT ---- 5 GENIC homozygous 57240091 5 53316361 53316362 C - 13 GENIC homozygous 55877520 5 53316680 53316681 G A 34 GENIC homozygous 55378373 5 53317949 53317952 AAG --- 16 GENIC homozygous 56009035 5 53319753 53319754 C T 27 GENIC homozygous 56009037 5 53320889 53320890 T TA 14 GENIC possibly homozygous 56009039 5 53321353 53321354 G GAGACAC 20 GENIC homozygous 55378375 5 53321379 53321380 T TAC 25 GENIC possibly homozygous 56009041 5 53322237 53322238 T C 36 GENIC homozygous 56009042 5 53323590 53323591 T TTGTGTGTGTGTGTG 10 GENIC heterozygous 56415982 5 53325611 53325612 A G 22 GENIC homozygous 55378378 5 53326773 53326777 GTGT ---- 12 GENIC heterozygous 56415984 5 53326775 53326777 GT -- 12 GENIC heterozygous 56415986 5 53326831 53326833 GC -- 15 GENIC homozygous 55378380 5 53327274 53327275 A G 27 GENIC homozygous 56009044 5 53328988 53328989 A G 21 GENIC homozygous 55378384 5 53329571 53329582 TGGTTGGTTGG ----------- 12 GENIC homozygous 56009046 5 53329641 53329645 TAGA ---- 20 GENIC homozygous 56009052 5 53339069 53339070 T - 8 GENIC homozygous 56009057 5 53330759 53330760 T C 36 GENIC homozygous 55378388 5 53332019 53332020 T A 16 GENIC homozygous 57240093 5 53332121 53332123 TG -- 5 GENIC homozygous 56613122 5 53332150 53332151 A ACC 4 GENIC heterozygous 55378390 5 53332150 53332151 A ACCC 4 GENIC heterozygous 56009055 5 53305607 53305619 GTGTGTGTGTGT ------------ 18 GENIC heterozygous 57378447 5 53351472 53351474 AT -- 1 GENIC homozygous 56487546 5 53353042 53353043 C CA 12 GENIC homozygous 55378396 5 53353150 53353151 C G 23 GENIC homozygous 55378397 5 53353942 53353943 G A 26 GENIC homozygous 56009067 5 53355364 53355365 C T 23 GENIC homozygous 56009069 5 53355759 53355760 C G 16 GENIC homozygous 55378399 5 53356600 53356601 A AT 26 GENIC homozygous 56009071 5 53360787 53360788 G C 33 GENIC homozygous 55378400 5 53360808 53360809 T - 33 GENIC homozygous 55378401 5 53361087 53361088 T C 27 GENIC homozygous 55378403 5 53361161 53361162 T C 19 GENIC homozygous 55378406