chrstartstopreference nucvariant nucdepthgenic statuszygosityvariant ID
5143500737143500739TA--11GENIChomozygous55759559
5143501668143501669CT35GENIChomozygous56125332
5143504207143504211TCTC----5GENICheterozygous56589272
5143504242143504244CT--12GENICpossibly homozygous56589273
5143504816143504817CT11GENIChomozygous55912597
5143504945143504946A-12GENIChomozygous55912599
5143506093143506094GA6GENIChomozygous55759576
5143507577143507585AAAAAAAC--------5GENIChomozygous55759580
5143508481143508483AC--3GENIChomozygous56458391
5143508490143508553CTCTCTCTCTCTCTCTCTCTCCTAACCAAAGCCCAGAGTTGATCTAAAACACACACTCACACA---------------------------------------------------------------1GENIChomozygous56589274
5143508596143508600GTGT----2GENICheterozygous55912601
5143508606143508607GA17GENICpossibly homozygous55912603
5143509248143509249A-15GENIChomozygous56125333
5143510093143510094CCT9GENICheterozygous55759586
5143512103143512104CT32GENIChomozygous56125334
5143513169143513181GTGTGTGTGTGT------------13GENIChomozygous56125335
5143513758143513759GGA11GENICpossibly homozygous55912608
5143519278143519279TA14GENIChomozygous55912610
5143519809143519810CG30GENIChomozygous56125336
5143520287143520288GGA15GENICheterozygous56553548
5143522265143522266TTG14GENIChomozygous55912614
5143522505143522506T-14GENIChomozygous55912616
5143526655143526656AG12GENIChomozygous55759607
5143527141143527142AC32GENIChomozygous55759608
5143527395143527396TC10GENIChomozygous55759610
5143528166143528170ACAT----1GENIChomozygous56570109
5143529180143529181AT28GENIChomozygous56125337
5143529368143529369CT20GENIChomozygous55759615
5143564024143564025AATT2INTERGENIChomozygous55759623
5143566084143566092CTTCCTTC--------2INTERGENIChomozygous55759624
5143566510143566511C-14INTERGENIChomozygous55759629
5143566973143566974GA28INTERGENIChomozygous55759630
5143567116143567117AG35INTERGENIChomozygous55759631
5143568753143568754CT22INTERGENIChomozygous55759632
5143569008143569009GA24INTERGENIChomozygous55759634
5143569082143569083AAAAG10INTERGENIChomozygous56458396
5143569226143569227CCA17INTERGENIChomozygous55759635
5143569353143569354GA17INTERGENIChomozygous55759636
5143570610143570620TTTTTTTTTT----------15INTERGENICheterozygous56458397
5143570611143570620TTTTTTTTT---------15INTERGENICheterozygous56458398
5143570784143570785AT40INTERGENIChomozygous55759638
5143572398143572406TCTCTCTC--------5INTERGENICheterozygous56458399
5143572400143572406TCTCTC------5INTERGENICheterozygous56458400
5143572452143572453AAT17INTERGENICpossibly homozygous55759639
5143572818143572819AAT4INTERGENIChomozygous55759641
5143573621143573622AT23INTERGENIChomozygous55759642
5143574153143574154GC22INTERGENIChomozygous55759643
5143575917143575925GTGTGTGT--------16INTERGENIChomozygous55759644
5143575933143575934GA14INTERGENIChomozygous56067686
5143578320143578321TC29INTERGENIChomozygous55759646
5143578364143578365CT19INTERGENIChomozygous55759647
5143579632143579633GA30INTERGENIChomozygous55759648
5143581191143581192TC28INTERGENIChomozygous55759649
5143582646143582650CACA----6INTERGENICheterozygous56458401
5143582648143582650CA--6INTERGENICheterozygous56458402
5143582979143582980CG35INTERGENIChomozygous55759650
5143584597143584598AG10GENIChomozygous55759651
5143585257143585258C-27GENIChomozygous55759652
5143586392143586393AC22GENIChomozygous56125338
5143586458143586459AG29GENIChomozygous55759655
5143587188143587189TTTGTGTG20GENIChomozygous55759657
5143587340143587350GTGTGTGTGT----------23GENICheterozygous56458403
5143587346143587350GTGT----23GENICheterozygous56710175
5143587348143587350GT--23GENICheterozygous56675588
5143587369143587370TC46GENICpossibly homozygous56125339
5143587460143587461GT49GENIChomozygous55912751
5143588405143588406GA24GENIChomozygous55912753
5143588673143588675TT--22GENIChomozygous55912755
5143589806143589807TC37GENIChomozygous55759667
5143590004143590005TC42GENIChomozygous55759670
5143590685143590686AG28GENIChomozygous55759671
5143592149143592150CT41GENIChomozygous55912763
5143590995143590996TA30GENIChomozygous56125340
5143591628143591629CT35GENIChomozygous55759672
5143592287143592288CT28GENIChomozygous55912765
5143592336143592337TC37GENIChomozygous55759673
5143592653143592654GC33GENIChomozygous55759674
5143592662143592663CCCT25GENIChomozygous55912767
5143592705143592706GC28GENIChomozygous55759675
5143592895143592896TC26GENIChomozygous55759677
5143593282143593283AG26GENIChomozygous55759679
5143594262143594263GA31GENIChomozygous56125341
5143594327143594328CCTT40GENIChomozygous55912769
5143595373143595374TC32GENIChomozygous55912771
5143595931143595932TC30GENIChomozygous55912775
5143595965143595966GT29GENIChomozygous55912777
5143596652143596653GA24GENIChomozygous56125342
5143596834143596835AG27GENIChomozygous55912779
5143596865143596866AG27GENIChomozygous55912781
5143597410143597411GA21GENIChomozygous55912783
5143597501143597502CCAT31GENIChomozygous55912785
5143597691143597692TC33GENIChomozygous55912787
5143598362143598364TT--20GENIChomozygous55912789
5143599933143599934G-41GENICpossibly homozygous55759689
5143599933143599934GGGCTACAGAACTCCAGTTATGTTCAGATTTAGGGGCACCCACCTTGTCTCACAGAGCCACAAATATGCCTTAGCTGATACATCCTCATAGATAGGTGACATACATTCTCAGACGGCT40GENICheterozygous56355263
5143599960143599961CT40GENICheterozygous55759690
5143601049143601050CCG30GENICpossibly homozygous55759693
5143601260143601278TGTGTGTGTGTGTGTGTG------------------19GENICheterozygous56125343
5143604883143604884A-25GENIChomozygous55759702
5143604903143604904GGT27GENIChomozygous55759703
5143604918143604919TC24GENIChomozygous55759704
5143604921143604922CCT25GENIChomozygous55759705
5143605064143605065CT19GENIChomozygous56125344
5143605336143605337GA23GENIChomozygous56125345
5143605456143605468ACAGGTCACTAT------------35GENIChomozygous56125346
5143606072143606073C-12GENICheterozygous56458405
5143606345143606347TT--3GENICheterozygous56458406
5143606558143606559GGGCAGCA29GENIChomozygous56125347
5143611244143611245AC20GENIChomozygous56125349
5143616136143616137T-13INTERGENICheterozygous56458407
5143617037143617038GGAA16INTERGENICheterozygous56290838
5143617038143617039A-16INTERGENICheterozygous56710176
5143617322143617323GA32INTERGENIChomozygous56125350
5143618384143618385A-6INTERGENICheterozygous56675590
5143618622143618623GA26INTERGENIChomozygous55759732
5143619583143619584TTA18INTERGENIChomozygous55912811
5143620012143620014GG--15INTERGENIChomozygous56355266
5143620376143620377CCA7INTERGENIChomozygous56675592
5143622528143622533CCTGG-----35INTERGENIChomozygous56125351
5143623973143623974CT31INTERGENIChomozygous56125352
5143624515143624516TA24INTERGENIChomozygous55759752
5143624950143624951AG24INTERGENIChomozygous55759755
5143625181143625182AG23INTERGENIChomozygous55759757
5143625344143625345GT44INTERGENIChomozygous55912815
5143625360143625361GGATGACA36INTERGENIChomozygous55759758
5143625575143625576GT13INTERGENIChomozygous55912817
5143625584143625585AT12INTERGENIChomozygous55912818
5143625585143625586AT12INTERGENIChomozygous55912820
5143625661143625662GA20INTERGENIChomozygous55912821
5143625812143625813CT27INTERGENIChomozygous55912823
5143625837143625838CT23INTERGENIChomozygous55912825
5143626106143626107A-29INTERGENIChomozygous55912827
5143626456143626464AAATAAAT--------2INTERGENIChomozygous56750862
5143626961143626962GA28INTERGENIChomozygous55912828
5143628712143628713AG36INTERGENIChomozygous55912830
5143629100143629101TC32INTERGENIChomozygous55759763
5143629543143629544AG24INTERGENIChomozygous55912832
5143629921143629922GA18INTERGENIChomozygous55912834
5143631047143631051AAAC----5INTERGENIChomozygous55912847
5143631092143631093AC17INTERGENIChomozygous55759769
5143631294143631305TTTTTTTTTTT-----------28INTERGENIChomozygous55912849
5143632421143632422AG19INTERGENIChomozygous55912853
5143632448143632449T-9INTERGENIChomozygous55759770
5143632754143632755AG20INTERGENIChomozygous55759771
5143634695143634696TC35INTERGENIChomozygous55759775
5143634771143634791TTCTTTTCTTTTCTTTTCTC--------------------19INTERGENIChomozygous56563267
5143635301143635302GA17INTERGENIChomozygous55912859
5143638861143638864TCC---6INTERGENICheterozygous56580103
5143636664143636666AA--11INTERGENIChomozygous55912860
5143636961143636962TA10INTERGENIChomozygous55912862
5143637281143637282AG42INTERGENIChomozygous55759780
5143638741143638840TCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCT---------------------------------------------------------------------------------------------------12INTERGENICpossibly homozygous56750864
5143638882143638885TCC---14INTERGENICheterozygous56125355
5143638948143639067AAAAGAAGTTTGGGGGGGTTGGGGATTTAGCTCAGCGGTAGAGCGCTTGCCTAGCAAACGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGAAAAAAAAAAAAAAAAAAAAAA-----------------------------------------------------------------------------------------------------------------------20INTERGENIChomozygous56355267
5143639129143639130CT26INTERGENIChomozygous55759796
5143639575143639576AG28INTERGENIChomozygous55759797
5143639964143639965GGTGTGTGTGTGTGTGTGTGTTTCCATGTGT6INTERGENIChomozygous56458413
5143640178143640210TTGCCTGCGCGCGTGCGTGCGTGCGTGCGTGC--------------------------------9INTERGENIChomozygous56355268
5143640254143640256GC--7INTERGENIChomozygous56355269
5143640333143640375TGTCTTTCTCCATGTGTGAAGAGGTCAGAGGTTAATATCAGG------------------------------------------19INTERGENIChomozygous56355270
5143640615143640616CT12INTERGENIChomozygous55759803
5143640723143640724GA18INTERGENIChomozygous55759806
5143640980143641058AAAGAGTCAGGCGTGGAGACTCGCCACGAAGACGCAGAGAAAGAGTCAGGCTTGGAGACTCGGCGCGAAGACGCAGAA------------------------------------------------------------------------------9INTERGENIChomozygous56458414
5143641224143641225AC25INTERGENIChomozygous56125357
5143641359143641360GA35INTERGENIChomozygous56125358
5143641904143641905CG39INTERGENIChomozygous56125359
5143642495143642496GT26INTERGENIChomozygous55759817
5143642737143642738CT14INTERGENIChomozygous56125360
5143642741143642742TC15INTERGENIChomozygous56125361
5143643922143643923AG26GENIChomozygous55912880
5143645053143645054GGA11GENIChomozygous55759823
5143645112143645118AATACT------14GENIChomozygous56458417
5143645119143645120AAGCTT13GENIChomozygous56458418
5143646514143646515AG16INTERGENIChomozygous55759826
5143646777143646778T-15INTERGENIChomozygous55759828
5143647292143647293GC21INTERGENIChomozygous55759829
5143647301143647305AAAA----18INTERGENIChomozygous55759830
5143647790143647791AC19INTERGENIChomozygous55759831
5143648100143648101CCA22INTERGENICpossibly homozygous55759833
5143648682143648683GA21INTERGENIChomozygous55759834
5143649224143649225GT30INTERGENIChomozygous55759835
5143649564143649588TGCGTGTGTGTGTGTGTGTGTGTG------------------------11INTERGENICheterozygous56750866
5143649566143649586CGTGTGTGTGTGTGTGTGTG--------------------11INTERGENICheterozygous56750868
5143649617143649635GAGAGAGAGAGAGAGAGA------------------15INTERGENICheterozygous56458421
5143649623143649635GAGAGAGAGAGA------------15INTERGENICpossibly homozygous56719488
5143649654143649655AC11INTERGENIChomozygous56458422
5143649660143649662CA--9INTERGENIChomozygous55759836
5143649841143649842GA22GENIChomozygous55759837
5143650275143650276CT24GENIChomozygous55759838
5143650874143650875T-13GENICpossibly homozygous56125364
5143650892143650893T-9GENICheterozygous56494406
5143652921143652922CCT15GENICpossibly homozygous55759839
5143653053143653054TA22GENIChomozygous55759840
5143653358143653359CCA9GENICpossibly homozygous55759841
5143653705143653706T-6GENICheterozygous56458424
5143653825143653828TTT---19GENIChomozygous56125365
5143653991143653992AG28GENIChomozygous55759845
5143654022143654023CT24GENIChomozygous55759846
5143654077143654078TA13GENIChomozygous55759847
5143654078143654079TA11GENIChomozygous55759848
5143654080143654081TA10GENIChomozygous55759849
5143654085143654086AAT11GENICpossibly homozygous56125366
5143654168143654169AG27GENIChomozygous55759851
5143654180143654181CG30GENIChomozygous55759852
5143654658143654659AG31GENIChomozygous55759854
5143657627143657628AAC17GENIChomozygous55759856
5143657632143657634GC--17GENIChomozygous55759857
5143657643143657644TTC12GENIChomozygous55759858
5143657653143657654A-12GENIChomozygous55759859
5143657656143657658CT--12GENIChomozygous55759860
5143657836143657837G-21GENIChomozygous55759861
5143661847143661848GA41GENIChomozygous56125367
5143663154143663155TTTG5GENICheterozygous55912921
5143663745143663746CCAAA2GENICheterozygous56494407
5143663904143663905AG26GENIChomozygous55759870
5143664036143664037AT6GENIChomozygous56750870
5143664536143664537AG31GENIChomozygous55759873
5143665462143665463A-5INTERGENIChomozygous56675594
5143666023143666024TTGC7INTERGENIChomozygous56750872
5143666025143666026TC7INTERGENIChomozygous56750874
5143666027143666028TC8INTERGENIChomozygous56750876
5143666566143666567TTC13INTERGENICheterozygous55912930
5143668685143668686GA20INTERGENICheterozygous55759882
5143667065143667066CT22INTERGENICpossibly homozygous56458427
5143667067143667068CT22INTERGENIChomozygous55759875
5143667445143667446AAAAC16INTERGENIChomozygous56125370
5143667573143667574CCGTGT19INTERGENICpossibly homozygous56125371
5143668687143668695TCTCTCTC--------2INTERGENIChomozygous56750878
5143670551143670552C-13INTERGENICpossibly homozygous56125372
5143670749143670775TCATCTCAGAGAGGACTCAGAACGGA--------------------------18INTERGENIChomozygous56125373
5143671237143671238TC36INTERGENIChomozygous55759884
5143671535143671536GGT13INTERGENIChomozygous56125374
5143672642143672643T-21INTERGENIChomozygous55759888
5143673054143673055GGA9INTERGENIChomozygous56125375
5143673436143673437CA15INTERGENIChomozygous56458430
5143673439143673445AAAAAA------9INTERGENICpossibly homozygous55759890
5143673440143673445AAAAA-----9INTERGENICheterozygous55759891
5143674746143674747CCGTGTGTGTGTGTGTGT12INTERGENICpossibly homozygous56570111
5143674746143674747CCGTGT12INTERGENICheterozygous56750880
5143675059143675060CCTGTG16INTERGENICheterozygous56750882
5143675070143675074TGTG----16INTERGENICpossibly homozygous56750884
5143677942143677943AT50INTERGENICheterozygous55759901
5143677946143677948GG--49INTERGENICheterozygous56355272
5143677949143677950GGAAA46INTERGENICheterozygous56355273
5143677951143677952GA47INTERGENICheterozygous56355274
5143678337143678338GA29INTERGENIChomozygous55759904
5143679958143679959TC25GENIChomozygous55759907
5143680892143680893CT12GENIChomozygous56125380
5143680924143680925CCT5GENICheterozygous56458432
5143681218143681219AG31GENIChomozygous55912966
5143682145143682146TC36GENIChomozygous55759909
5143682560143682594TACAATGAGGCTGCTTACCTGAGTGAGGTTCCAC----------------------------------17GENIChomozygous56355275
5143685482143685483CT23GENIChomozygous56125381
5143686807143686808GT32GENIChomozygous55759912
5143688288143688289AG17GENIChomozygous55759913
5143689108143689110TG--27GENIChomozygous56125382
5143689127143689151ATGTGTGTCTGTGCGTGCCAGCAC------------------------38GENIChomozygous56750886
5143689350143689358AGAGAGAG--------9GENIChomozygous56458434
5143690249143690250TTTG16GENICheterozygous55912974
5143690250143690251TTG16GENICheterozygous55912976
5143690736143690737AAT24GENIChomozygous55759917
5143693448143693449GGA11GENIChomozygous55759918
5143696465143696466TC23GENIChomozygous56125385
5143696516143696517GA24GENIChomozygous56125386
5143696798143696799GA14GENIChomozygous55759922
5143696836143696837CG21GENIChomozygous56125387
5143698524143698525CT30GENIChomozygous55759924
5143705353143705354GGA5GENICheterozygous56125389
5143703805143703806A-15GENIChomozygous55912992
5143704426143704427TC24GENIChomozygous55759925
5143704560143704561CT16GENIChomozygous56125388
5143705369143705370CCAAAAAAAAAAAAAAAAAAA7GENIChomozygous56458438
5143705391143705394CTC---13GENIChomozygous55759928
5143706549143706550TC20GENIChomozygous55759932
5143706558143706559TC20GENIChomozygous55759933
5143706582143706583TC17GENIChomozygous55759934
5143706585143706586TC17GENIChomozygous55759936
5143708052143708072AGATAGATAGATAGATAGAT--------------------8GENICheterozygous56573969
5143708056143708072AGATAGATAGATAGAT----------------8GENICpossibly homozygous56458439
5143708186143708187AAACAC19GENIChomozygous56125390
5143709481143709482TTC9GENIChomozygous55759942
5143709483143709484TTC4GENIChomozygous56458440
5143709499143709500GGAA12GENIChomozygous56750888
5143709553143709554GT14GENIChomozygous56125391
5143710055143710056AT22GENIChomozygous55759945
5143711534143711535CT18GENIChomozygous56125392
5143711978143711979TTA8GENICheterozygous56067694
5143713452143713453AG40GENIChomozygous55759948