chrstartstopreference nucvariant nucdepthgenic statuszygosityvariant ID
5143500737143500739TA--25GENIChomozygous55759559
5143504207143504211TCTC----14GENICpossibly homozygous56589272
5143504242143504244CT--24GENICheterozygous56589273
5143504816143504817CT21GENIChomozygous55912597
5143504945143504946A-24GENICpossibly homozygous55912599
5143506093143506094GA37GENICpossibly homozygous55759576
5143507577143507585AAAAAAAC--------16GENIChomozygous55759580
5143508481143508483AC--3GENIChomozygous56458391
5143508490143508553CTCTCTCTCTCTCTCTCTCTCCTAACCAAAGCCCAGAGTTGATCTAAAACACACACTCACACA---------------------------------------------------------------1GENIChomozygous56589274
5143508596143508600GTGT----3GENICheterozygous55912601
5143508606143508607GA14GENICpossibly homozygous55912603
5143510093143510094CCT11GENICheterozygous55759586
5143512103143512104CT27GENIChomozygous56125334
5143513168143513169AAGTGTGT4GENIChomozygous56589275
5143513758143513759GGA31GENIChomozygous55912608
5143519278143519279TA25GENIChomozygous55912610
5143519809143519810CG23GENIChomozygous56125336
5143520287143520288GGA22GENICheterozygous56553548
5143522265143522266TTG31GENICpossibly homozygous55912614
5143522505143522506T-22GENICpossibly homozygous55912616
5143526655143526656AG27GENIChomozygous55759607
5143527141143527142AC19GENIChomozygous55759608
5143527395143527396TC24GENIChomozygous55759610
5143528121143528122AAT9GENIChomozygous56573962
5143528166143528170ACAT----8GENIChomozygous56570109
5143529180143529181AT31GENIChomozygous56125337
5143529368143529369CT36GENIChomozygous55759615
5143564295143564298AAC---1INTERGENIChomozygous56573965
5143566084143566092CTTCCTTC--------13INTERGENIChomozygous55759624
5143566356143566357GGGATAGATA9INTERGENICpossibly homozygous56589276
5143566356143566357GGGATA9INTERGENICheterozygous56458395
5143566510143566511C-34INTERGENIChomozygous55759629
5143566733143566734CT24INTERGENIChomozygous56188619
5143566973143566974GA25INTERGENIChomozygous55759630
5143567116143567117AG23INTERGENIChomozygous55759631
5143568753143568754CT19INTERGENIChomozygous55759632
5143569008143569009GA20INTERGENIChomozygous55759634
5143569082143569083AAAAG13INTERGENIChomozygous56458396
5143569226143569227CCA17INTERGENIChomozygous55759635
5143570784143570785AT11INTERGENIChomozygous55759638
5143570872143570873GA13INTERGENIChomozygous56188621
5143570875143570876AG13INTERGENIChomozygous56355262
5143572384143572406TCTCTCTCTCTCTCTCTCTCTC----------------------7INTERGENIChomozygous56589277
5143572463143572464T-10INTERGENICpossibly homozygous55912642
5143572702143572703GGCACACACACA5INTERGENIChomozygous56589278
5143572818143572819AAT16INTERGENIChomozygous55759641
5143572827143572828AT20INTERGENIChomozygous56589279
5143574153143574154GC28INTERGENIChomozygous55759643
5143575916143575917CCGT7INTERGENICpossibly homozygous56188623
5143576630143576631AAC21INTERGENIChomozygous55912674
5143576634143576635G-23INTERGENIChomozygous55912676
5143576833143576834TC4INTERGENIChomozygous55912678
5143577464143577465TTCTTCAA16INTERGENIChomozygous55912684
5143577969143577970GGCCCTAGCTGGCAGTA24INTERGENIChomozygous55912686
5143578003143578004GA17INTERGENIChomozygous55912688
5143578049143578050AG15INTERGENIChomozygous55912690
5143578299143578300CT24INTERGENIChomozygous56188624
5143578320143578321TC24INTERGENIChomozygous55759646
5143578364143578365CT26INTERGENIChomozygous55759647
5143579275143579276CCGGG11INTERGENIChomozygous55912692
5143579281143579282TG14INTERGENIChomozygous56188625
5143579407143579408CT20INTERGENIChomozygous55912696
5143579528143579529TC26INTERGENIChomozygous55912700
5143579531143579532CG27INTERGENIChomozygous55912702
5143579563143579564TC28INTERGENIChomozygous55912704
5143579577143579578AG24INTERGENIChomozygous55912706
5143579958143579959CG30INTERGENIChomozygous55912710
5143580628143580629CT24INTERGENIChomozygous55912712
5143581191143581192TC30INTERGENIChomozygous55759649
5143581196143581197CT34INTERGENIChomozygous55912714
5143581371143581375TTCA----19INTERGENIChomozygous55912718
5143581630143581631AC16INTERGENIChomozygous55912720
5143581823143581824TC14INTERGENIChomozygous55912722
5143581879143581880AG15INTERGENIChomozygous55912724
5143582510143582511CT21INTERGENIChomozygous55912726
5143582560143582561CT22INTERGENIChomozygous55912728
5143582646143582650CACA----2INTERGENICheterozygous56458401
5143582648143582650CA--2INTERGENICheterozygous56458402
5143582979143582980CG18INTERGENIChomozygous55759650
5143582985143582986CCT18INTERGENIChomozygous55912732
5143583173143583174TC22INTERGENIChomozygous55912734
5143583650143583651CCA23GENIChomozygous55912736
5143584002143584003CT19GENIChomozygous55912738
5143584597143584598AG26GENIChomozygous55759651
5143585236143585237TC28GENIChomozygous55912740
5143585689143585690TC20GENIChomozygous55759653
5143585982143585983CT9GENIChomozygous55759654
5143586458143586459AG37GENIChomozygous55759655
5143586963143586964GA29GENIChomozygous55759656
5143587188143587189TTTGTGTG19GENIChomozygous55759657
5143587342143587350GTGTGTGT--------8GENIChomozygous56458404
5143587533143587534TC21GENIChomozygous55759660
5143588414143588415CT17GENIChomozygous55759661
5143588450143588451TG23GENIChomozygous55759662
5143588508143588509CT32GENIChomozygous55759663
5143588674143588675T-27GENIChomozygous55759664
5143588944143588945CG26GENIChomozygous55759665
5143589664143589665AG25GENIChomozygous55759666
5143589806143589807TC28GENIChomozygous55759667
5143589869143589870A-14GENIChomozygous55759668
5143589936143589937TC23GENIChomozygous55759669
5143590004143590005TC32GENIChomozygous55759670
5143590685143590686AG32GENIChomozygous55759671
5143591628143591629CT20GENIChomozygous55759672
5143592336143592337TC13GENIChomozygous55759673
5143592653143592654GC18GENIChomozygous55759674
5143592705143592706GC20GENIChomozygous55759675
5143592714143592720TCTCTG------20GENIChomozygous55759676
5143592895143592896TC11GENIChomozygous55759677
5143592953143592954GT16GENIChomozygous55759678
5143593282143593283AG19GENIChomozygous55759679
5143594565143594566TC29GENIChomozygous55759680
5143595235143595236GA20GENIChomozygous55759681
5143597752143597753GA22GENIChomozygous55759682
5143597839143597840GA31GENIChomozygous55759683
5143597869143597870GA30GENICpossibly homozygous55759684
5143597908143597909GGA28GENIChomozygous55759685
5143598362143598364TT--15GENICheterozygous55912789
5143598363143598364T-15GENICpossibly homozygous55759686
5143598960143598961CA13GENICpossibly homozygous55759687
5143599933143599934GGGCTACAGAACTCCAGTTATGTTCAGATTTAGGGGCACCCACCTTGTCTCACAGAGCCACAAATATGCCTTAGCTGATACATCCTCATAGATAGGTGACATACATTCTCAGACGGCT34GENIChomozygous56355263
5143600051143600052TC27GENIChomozygous55759691
5143600230143600231GC27GENIChomozygous55759692
5143601049143601050CCGG6GENIChomozygous55759694
5143601188143601189GA15GENIChomozygous55759695
5143601197143601198AG13GENIChomozygous55759696
5143601235143601236TTTCTCTC1GENIChomozygous56494403
5143601302143601304CG--10GENIChomozygous55759698
5143603501143603502GC15GENIChomozygous55759700
5143603842143603843GA10GENIChomozygous55759701
5143604883143604884A-20GENIChomozygous55759702
5143604903143604904GGT22GENIChomozygous55759703
5143604918143604919TC21GENIChomozygous55759704
5143604921143604922CCT19GENIChomozygous55759705
5143605466143605467AG26GENIChomozygous56355264
5143606071143606073CC--4GENIChomozygous56494404
5143606343143606347TTTT----8GENICheterozygous55759707
5143606344143606347TTT---8GENICpossibly homozygous55759708
5143606747143606748TC20GENIChomozygous55759709
5143608656143608657AG22GENIChomozygous55759710
5143609114143609115TA27GENIChomozygous55759711
5143609833143609834AG9GENIChomozygous55759712
5143610512143610513AT20GENIChomozygous55759713
5143612201143612202CCTGTGTATGTGTG9GENIChomozygous55759718
5143613011143613012AG12INTERGENICpossibly homozygous55759719
5143613270143613271AG19INTERGENIChomozygous55759720
5143613274143613275AG19INTERGENIChomozygous55759721
5143613752143613753AG17INTERGENIChomozygous55759722
5143614858143614859GA16INTERGENIChomozygous55759723
5143614878143614879CT15INTERGENIChomozygous55759724
5143615772143615773GT22INTERGENIChomozygous55759725
5143616136143616137T-6INTERGENIChomozygous56458407
5143618348143618349CT12INTERGENIChomozygous55759729
5143618622143618623GA23INTERGENIChomozygous55759732
5143620012143620014GG--4INTERGENIChomozygous56355266
5143620377143620379AA--10INTERGENICpossibly homozygous55759734
5143620531143620532AG27INTERGENIChomozygous55759736
5143621529143621530AC18INTERGENIChomozygous55759737
5143622371143622372CA24INTERGENIChomozygous55759739
5143622557143622558AG33INTERGENIChomozygous55759740
5143622581143622582AG32INTERGENIChomozygous55759741
5143622934143622935AG15INTERGENIChomozygous55759742
5143623048143623049GA21INTERGENIChomozygous55759743
5143623243143623244TTGTG3INTERGENIChomozygous55759744
5143623348143623349GA18INTERGENIChomozygous55759745
5143623629143623630G-28INTERGENIChomozygous55759746
5143623694143623695AG21INTERGENIChomozygous55759747
5143623745143623746TA27INTERGENIChomozygous55759748
5143623858143623859GA36INTERGENIChomozygous55759749
5143624330143624331TG13INTERGENIChomozygous55759750
5143624432143624433TG26INTERGENIChomozygous55759751
5143624515143624516TA29INTERGENIChomozygous55759752
5143624771143624772GA19INTERGENIChomozygous55759753
5143624811143624812TC17INTERGENIChomozygous55759754
5143624950143624951AG26INTERGENIChomozygous55759755
5143625019143625020GGCGGCAGCTCCTT4INTERGENIChomozygous55759756
5143625181143625182AG21INTERGENIChomozygous55759757
5143625360143625361GGATGACA20INTERGENIChomozygous55759758
5143625377143625378CT18INTERGENIChomozygous55759760
5143626455143626456AAAAAT4INTERGENIChomozygous56718046
5143626533143626534T-16INTERGENIChomozygous55759761
5143628942143628943CT30INTERGENIChomozygous55759762
5143629100143629101TC28INTERGENICpossibly homozygous55759763
5143630045143630046TC21INTERGENIChomozygous55759764
5143630829143630830GGA15INTERGENICpossibly homozygous55759766
5143630961143630962GGT21INTERGENIChomozygous55759767
5143631031143631032A-22INTERGENIChomozygous55759768
5143631092143631093AC25INTERGENIChomozygous55759769
5143631293143631294CCTTT13INTERGENIChomozygous56458409
5143632448143632449T-25INTERGENIChomozygous55759770
5143632754143632755AG19INTERGENIChomozygous55759771
5143634421143634422AG36INTERGENIChomozygous55759774
5143634695143634696TC23INTERGENIChomozygous55759775
5143634750143634765TTTCTTTTCTTTTCT---------------13INTERGENIChomozygous56458410
5143637249143637250GT17INTERGENIChomozygous55759779
5143637281143637282AG13INTERGENIChomozygous55759780
5143637980143637981C-19INTERGENIChomozygous55759781
5143638049143638050AG26INTERGENIChomozygous55759782
5143638276143638277GA22INTERGENIChomozygous55759783
5143638334143638335CT30INTERGENIChomozygous55759784
5143638750143638843TCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCC---------------------------------------------------------------------------------------------17INTERGENIChomozygous56458411
5143638855143638864TCCTCCTCC---------8INTERGENIChomozygous56458412
5143638948143639067AAAAGAAGTTTGGGGGGGTTGGGGATTTAGCTCAGCGGTAGAGCGCTTGCCTAGCAAACGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGAAAAAAAAAAAAAAAAAAAAAA-----------------------------------------------------------------------------------------------------------------------26INTERGENIChomozygous56355267
5143639129143639130CT30INTERGENIChomozygous55759796
5143639575143639576AG27INTERGENIChomozygous55759797
5143639964143639965GGTGTGTGTGTGTGTGTGTGTTTCCATGTGT1INTERGENIChomozygous56458413
5143640178143640210TTGCCTGCGCGCGTGCGTGCGTGCGTGCGTGC--------------------------------8INTERGENIChomozygous56355268
5143640213143640214CT2INTERGENIChomozygous55912868
5143640254143640256GC--7INTERGENIChomozygous56355269
5143640333143640375TGTCTTTCTCCATGTGTGAAGAGGTCAGAGGTTAATATCAGG------------------------------------------18INTERGENICpossibly homozygous56355270
5143640615143640616CT24INTERGENIChomozygous55759803
5143640647143640649TT--16INTERGENICheterozygous55759804
5143640648143640649T-16INTERGENICheterozygous55759805
5143640723143640724GA35INTERGENIChomozygous55759806
5143640980143641058AAAGAGTCAGGCGTGGAGACTCGCCACGAAGACGCAGAGAAAGAGTCAGGCTTGGAGACTCGGCGCGAAGACGCAGAA------------------------------------------------------------------------------5INTERGENIChomozygous56458414
5143641078143641081GAG---21INTERGENIChomozygous55759814
5143641603143641604CA10INTERGENIChomozygous55759815
5143642222143642223GA30INTERGENIChomozygous55759816
5143642495143642496GT14INTERGENIChomozygous55759817
5143642811143642812GGATATATATATATATGTAT9INTERGENIChomozygous56458415
5143642840143642841GT23INTERGENIChomozygous55912877
5143643166143643167A-25GENIChomozygous56458416
5143643236143643237CT36GENIChomozygous55759819
5143643306143643307CT31GENIChomozygous55759820
5143643428143643429CG28GENIChomozygous55759821
5143643641143643642CT24GENIChomozygous55759822
5143645053143645054GGA20GENIChomozygous55759823
5143645112143645118AATACT------26GENIChomozygous56458417
5143645119143645120AAGCTT25GENIChomozygous56458418
5143646514143646515AG8INTERGENIChomozygous55759826
5143646681143646682CA11INTERGENIChomozygous55759827
5143646777143646778T-13INTERGENIChomozygous55759828
5143647292143647293GC24INTERGENIChomozygous55759829
5143647301143647305AAAA----23INTERGENIChomozygous55759830
5143647790143647791AC30INTERGENIChomozygous55759831
5143648100143648101CCA18INTERGENIChomozygous55759833
5143648682143648683GA17INTERGENIChomozygous55759834
5143649224143649225GT32INTERGENIChomozygous55759835
5143649565143649567GC--3INTERGENICheterozygous56458419
5143649566143649570CGTG----4INTERGENICheterozygous56494405
5143649615143649635GAGAGAGAGAGAGAGAGAGA--------------------10INTERGENICheterozygous56458420
5143649617143649635GAGAGAGAGAGAGAGAGA------------------10INTERGENICheterozygous56458421
5143650275143650276CT26GENIChomozygous55759838
5143649654143649655AC7INTERGENIChomozygous56458422
5143649660143649662CA--7INTERGENIChomozygous55759836
5143649841143649842GA20GENIChomozygous55759837
5143650874143650875T-21GENICpossibly homozygous56125364
5143650892143650893T-16GENICheterozygous56494406
5143652921143652922CCT9GENIChomozygous55759839
5143653053143653054TA18GENIChomozygous55759840
5143653704143653706TT--6GENICheterozygous56458423
5143653705143653706T-6GENICheterozygous56458424
5143654077143654078TA8GENIChomozygous55759847
5143653825143653828TTT---9GENIChomozygous56125365
5143653991143653992AG14GENIChomozygous55759845
5143654022143654023CT11GENIChomozygous55759846
5143654078143654079TA9GENIChomozygous55759848
5143654080143654081TA12GENIChomozygous55759849
5143654087143654088TTA9GENIChomozygous55759850
5143654168143654169AG13GENIChomozygous55759851
5143654180143654181CG12GENIChomozygous55759852
5143654658143654659AG22GENIChomozygous55759854
5143656319143656320TC28GENIChomozygous55759855
5143657627143657628AAC14GENIChomozygous55759856
5143657632143657634GC--13GENIChomozygous55759857
5143657643143657644TTC6GENIChomozygous55759858
5143657653143657654A-4GENIChomozygous55759859
5143657656143657658CT--4GENIChomozygous55759860
5143657836143657837G-22GENIChomozygous55759861
5143659534143659536TA--7GENIChomozygous55759862
5143659541143659551TTATTATTAT----------8GENIChomozygous55759863
5143663154143663155TTTGTG3GENIChomozygous55759868
5143663745143663746CCAA3GENICheterozygous55759869
5143663745143663746CCAAA3GENICheterozygous56494407
5143663904143663905AG33GENIChomozygous55759870
5143664036143664037A-32GENIChomozygous55759871
5143664037143664038AT32GENIChomozygous56355271
5143664351143664352GGATGT16GENICpossibly homozygous56618664
5143664536143664537AG14GENIChomozygous55759873
5143667065143667066CT18INTERGENIChomozygous56458427
5143667067143667068CT18INTERGENIChomozygous55759875
5143667438143667439AAAAC29INTERGENICheterozygous55759876
5143667576143667588GTGTGTGTGTGT------------8INTERGENIChomozygous56458429
5143668477143668478CG13INTERGENIChomozygous55759880
5143668560143668561G-4INTERGENIChomozygous55759881
5143668685143668686GA19INTERGENIChomozygous55759882
5143670550143670552CC--15INTERGENIChomozygous55759883
5143671237143671238TC24INTERGENIChomozygous55759884
5143671503143671504CA26INTERGENIChomozygous55759885
5143671720143671721TG11INTERGENIChomozygous55759887
5143672642143672643T-13INTERGENIChomozygous55759888
5143673436143673437CA20INTERGENIChomozygous56458430
5143673439143673445AAAAAA------11INTERGENICheterozygous55759890
5143673440143673445AAAAA-----11INTERGENICpossibly homozygous55759891
5143673735143673736A-21INTERGENIChomozygous56067692
5143674747143674753GTGTGT------14INTERGENICheterozygous55759892
5143674749143674753GTGT----14INTERGENICheterozygous55759893
5143675060143675074TGTGTGTGTGTGTG--------------14INTERGENICheterozygous56532292
5143675062143675074TGTGTGTGTGTG------------14INTERGENICheterozygous56458431
5143676382143676383AG13INTERGENIChomozygous55759895
5143677942143677943AT16INTERGENICheterozygous55759901
5143677946143677948GG--15INTERGENICpossibly homozygous56355272
5143677949143677950GGAAA14INTERGENICpossibly homozygous56355273
5143677951143677952GA13INTERGENICpossibly homozygous56355274
5143678337143678338GA24INTERGENIChomozygous55759904
5143678734143678735AG15GENIChomozygous55759905
5143679011143679012AG15GENIChomozygous55759906
5143679958143679959TC18GENIChomozygous55759907
5143680636143680638TG--5GENIChomozygous55759908
5143680670143680696TATATATATATATATATATATATATA--------------------------3GENICheterozygous56618666
5143680672143680696TATATATATATATATATATATATA------------------------3GENICheterozygous56494408
5143680925143680926T-4GENICheterozygous56458433
5143682145143682146TC16GENIChomozygous55759909
5143682560143682594TACAATGAGGCTGCTTACCTGAGTGAGGTTCCAC----------------------------------12GENIChomozygous56355275
5143682728143682729CT6GENIChomozygous55759911
5143686807143686808GT25GENIChomozygous55759912
5143688288143688289AG11GENIChomozygous55759913
5143688655143688656GT26GENIChomozygous55759914
5143689205143689206AATG13GENICheterozygous55759915
5143689205143689206AATGTG13GENICpossibly homozygous55759916
5143689350143689358AGAGAGAG--------3GENIChomozygous56458434
5143690244143690245GGTTTTTTTTTTGT16GENICpossibly homozygous56458436
5143690736143690737AAT25GENIChomozygous55759917
5143693448143693449GGA7GENIChomozygous55759918
5143693668143693669TTAAAACAAGGAAGA14GENIChomozygous55759919
5143693693143693694GC16GENIChomozygous55759920
5143696459143696460CG25GENIChomozygous55759921
5143696798143696799GA28GENIChomozygous55759922
5143697731143697732TC19GENIChomozygous55759923
5143698524143698525CT28GENIChomozygous55759924
5143703805143703806A-27GENIChomozygous55912992
5143704082143704083CG32GENIChomozygous56710177
5143704426143704427TC30GENIChomozygous55759925
5143704543143704544TC15GENIChomozygous55759926
5143705116143705117GGAA13GENIChomozygous55759927
5143705369143705370CCAAAAAAAAAAAAAAAAAAA5GENIChomozygous56458438
5143705391143705394CTC---8GENIChomozygous55759928
5143705594143705595CCGA19GENIChomozygous55759929
5143705745143705746CT20GENIChomozygous55759930
5143705936143705937CT32GENIChomozygous55759931
5143706549143706550TC13GENIChomozygous55759932
5143706558143706559TC13GENIChomozygous55759933
5143706582143706583TC15GENIChomozygous55759934
5143706585143706586TC15GENIChomozygous55759936
5143707635143707636CT30GENIChomozygous55759938
5143708052143708072AGATAGATAGATAGATAGAT--------------------14GENIChomozygous56573969
5143708186143708187AAAC25GENICpossibly homozygous55759940
5143708186143708187AAACAC25GENICheterozygous56125390
5143708838143708839CT38GENIChomozygous55759941
5143709481143709482TTC27GENIChomozygous55759942
5143709483143709484TTC18GENICpossibly homozygous56458440
5143709500143709503AAA---21GENICpossibly homozygous55759944
5143709512143709513AC20GENIChomozygous56458441
5143710055143710056AT21GENIChomozygous55759945
5143710375143710376AAATGGC28GENIChomozygous55759946
5143711173143711174TTA28GENIChomozygous55759947
5143713452143713453AG37GENIChomozygous55759948
5143713656143713657GA23GENIChomozygous55759949