chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
5	143501519	143501520	T	TG	9	GENIC	homozygous	55759563
5	143502408	143502409	T	C	19	GENIC	homozygous	55759569
5	143502984	143502985	C	T	10	GENIC	homozygous	55759570
5	143503234	143503242	AGTAAAAT	--------	2	GENIC	homozygous	55759571
5	143505370	143505371	A	G	3	GENIC	homozygous	55759574
5	143505501	143505502	G	GAAA	2	GENIC	heterozygous	55759575
5	143506093	143506094	G	A	18	GENIC	homozygous	55759576
5	143506851	143506852	T	C	16	GENIC	homozygous	55759577
5	143507181	143507182	A	C	5	GENIC	heterozygous	55759578
5	143507785	143507786	T	A	18	GENIC	possibly homozygous	55759583
5	143512197	143512198	C	T	16	GENIC	heterozygous	55759589
5	143512403	143512404	T	C	16	GENIC	possibly homozygous	55759590
5	143513301	143513302	T	C	16	GENIC	homozygous	55759593
5	143513759	143513760	A	-	1	GENIC	homozygous	55759594
5	143514376	143514377	A	C	12	GENIC	homozygous	55759595
5	143514977	143514978	T	C	10	GENIC	homozygous	55759596
5	143515924	143515925	G	A	11	GENIC	homozygous	55759597
5	143516618	143516619	A	AGGCCACT	1	GENIC	homozygous	55759598
5	143518310	143518311	T	C	6	GENIC	homozygous	55759599
5	143520072	143520073	C	G	12	GENIC	homozygous	55759600
5	143522245	143522247	TG	--	2	GENIC	heterozygous	55759603
5	143522850	143522851	T	C	14	GENIC	homozygous	55759605
5	143523066	143523067	C	T	31	GENIC	homozygous	55759606
5	143526655	143526656	A	G	13	GENIC	homozygous	55759607
5	143527141	143527142	A	C	6	GENIC	homozygous	55759608
5	143527195	143527196	T	TTTG	1	GENIC	homozygous	55759609
5	143527395	143527396	T	C	15	GENIC	possibly homozygous	55759610
5	143527551	143527552	C	T	8	GENIC	homozygous	55759611
5	143528419	143528420	C	T	6	GENIC	homozygous	55759613
5	143528439	143528440	A	T	24	GENIC	possibly homozygous	55759614
5	143529368	143529369	C	T	17	GENIC	homozygous	55759615
5	143529811	143529812	T	A	11	GENIC	heterozygous	55759616
5	143530580	143530581	G	A	15	GENIC	homozygous	55759617
5	143531328	143531329	T	C	6	GENIC	homozygous	55759619
5	143532111	143532112	T	TTTTG	2	GENIC	heterozygous	55759620
5	143532429	143532430	C	T	14	GENIC	homozygous	55759621
5	143566510	143566511	C	-	5	INTERGENIC	homozygous	55759629
5	143566973	143566974	G	A	12	INTERGENIC	homozygous	55759630
5	143567116	143567117	A	G	2	INTERGENIC	homozygous	55759631
5	143568753	143568754	C	T	9	INTERGENIC	possibly homozygous	55759632
5	143569008	143569009	G	A	5	INTERGENIC	homozygous	55759634
5	143569082	143569083	A	AAAG	5	INTERGENIC	heterozygous	56458396
5	143569226	143569227	C	CA	10	INTERGENIC	homozygous	55759635
5	143569353	143569354	G	A	10	INTERGENIC	possibly homozygous	55759636
5	143570784	143570785	A	T	11	INTERGENIC	homozygous	55759638
5	143572818	143572819	A	AT	7	INTERGENIC	homozygous	55759641
5	143573621	143573622	A	T	16	INTERGENIC	homozygous	55759642
5	143574153	143574154	G	C	22	INTERGENIC	possibly homozygous	55759643
5	143575917	143575925	GTGTGTGT	--------	4	INTERGENIC	homozygous	55759644
5	143575933	143575934	G	A	6	INTERGENIC	heterozygous	56067686
5	143578320	143578321	T	C	11	INTERGENIC	homozygous	55759646
5	143578364	143578365	C	T	12	INTERGENIC	heterozygous	55759647
5	143579632	143579633	G	A	23	INTERGENIC	homozygous	55759648
5	143581191	143581192	T	C	10	INTERGENIC	possibly homozygous	55759649
5	143582979	143582980	C	G	8	INTERGENIC	homozygous	55759650
5	143584597	143584598	A	G	9	GENIC	heterozygous	55759651
5	143585257	143585258	C	-	2	GENIC	homozygous	55759652
5	143585689	143585690	T	C	17	GENIC	possibly homozygous	55759653
5	143585982	143585983	C	T	10	GENIC	homozygous	55759654
5	143586458	143586459	A	G	9	GENIC	homozygous	55759655
5	143586963	143586964	G	A	15	GENIC	possibly homozygous	55759656
5	143587188	143587189	T	TTGTGTG	2	GENIC	homozygous	55759657
5	143587533	143587534	T	C	12	GENIC	possibly homozygous	55759660
5	143588414	143588415	C	T	16	GENIC	homozygous	55759661
5	143588450	143588451	T	G	16	GENIC	possibly homozygous	55759662
5	143588508	143588509	C	T	16	GENIC	possibly homozygous	55759663
5	143588674	143588675	T	-	6	GENIC	homozygous	55759664
5	143588944	143588945	C	G	5	GENIC	heterozygous	55759665
5	143589664	143589665	A	G	6	GENIC	heterozygous	55759666
5	143589806	143589807	T	C	7	GENIC	homozygous	55759667
5	143589869	143589870	A	-	4	GENIC	homozygous	55759668
5	143589936	143589937	T	C	9	GENIC	homozygous	55759669
5	143590004	143590005	T	C	12	GENIC	homozygous	55759670
5	143590685	143590686	A	G	5	GENIC	homozygous	55759671
5	143591628	143591629	C	T	15	GENIC	possibly homozygous	55759672
5	143592336	143592337	T	C	9	GENIC	heterozygous	55759673
5	143592653	143592654	G	C	3	GENIC	heterozygous	55759674
5	143592895	143592896	T	C	3	GENIC	homozygous	55759677
5	143592953	143592954	G	T	2	GENIC	homozygous	55759678
5	143593282	143593283	A	G	7	GENIC	possibly homozygous	55759679
5	143594565	143594566	T	C	16	GENIC	homozygous	55759680
5	143595235	143595236	G	A	11	GENIC	possibly homozygous	55759681
5	143597752	143597753	G	A	9	GENIC	homozygous	55759682
5	143597839	143597840	G	A	11	GENIC	homozygous	55759683
5	143597869	143597870	G	A	5	GENIC	heterozygous	55759684
5	143597908	143597909	G	GA	6	GENIC	heterozygous	55759685
5	143598362	143598364	TT	--	7	GENIC	heterozygous	55912789
5	143598363	143598364	T	-	7	GENIC	possibly homozygous	55759686
5	143598960	143598961	C	A	5	GENIC	homozygous	55759687
5	143599933	143599934	G	GGCTACAGAACTCCAGTTATGTTCAGATTTAGGGGCACCCACCTTGTCTCACAGAGCCACAAATATGCCTTAGCTGATACATCCTCATAGATAGGTGACATACATTCTCAGACGGCT	5	GENIC	heterozygous	56355263
5	143600051	143600052	T	C	8	GENIC	homozygous	55759691
5	143600230	143600231	G	C	15	GENIC	possibly homozygous	55759692
5	143601188	143601189	G	A	5	GENIC	homozygous	55759695
5	143601197	143601198	A	G	6	GENIC	homozygous	55759696
5	143603501	143603502	G	C	12	GENIC	homozygous	55759700
5	143603842	143603843	G	A	5	GENIC	heterozygous	55759701
5	143604883	143604884	A	-	7	GENIC	possibly homozygous	55759702
5	143604903	143604904	G	GT	5	GENIC	homozygous	55759703
5	143604918	143604919	T	C	1	GENIC	homozygous	55759704
5	143605466	143605467	A	G	12	GENIC	possibly homozygous	56355264
5	143606747	143606748	T	C	14	GENIC	homozygous	55759709
5	143608656	143608657	A	G	5	GENIC	homozygous	55759710
5	143609114	143609115	T	A	8	GENIC	homozygous	55759711
5	143609833	143609834	A	G	4	GENIC	heterozygous	55759712
5	143610512	143610513	A	T	10	GENIC	homozygous	55759713
5	143613011	143613012	A	G	4	INTERGENIC	homozygous	55759719
5	143613270	143613271	A	G	4	INTERGENIC	homozygous	55759720
5	143613274	143613275	A	G	7	INTERGENIC	homozygous	55759721
5	143613752	143613753	A	G	9	INTERGENIC	homozygous	55759722
5	143614858	143614859	G	A	3	INTERGENIC	heterozygous	55759723
5	143615772	143615773	G	T	9	INTERGENIC	possibly homozygous	55759725
5	143616135	143616136	C	CT	2	INTERGENIC	heterozygous	56683115
5	143618622	143618623	G	A	18	INTERGENIC	possibly homozygous	55759732
5	143620012	143620014	GG	--	2	INTERGENIC	homozygous	56355266
5	143620531	143620532	A	G	5	INTERGENIC	homozygous	55759736
5	143621529	143621530	A	C	14	INTERGENIC	possibly homozygous	55759737
5	143622371	143622372	C	A	15	INTERGENIC	homozygous	55759739
5	143622557	143622558	A	G	13	INTERGENIC	homozygous	55759740
5	143622581	143622582	A	G	11	INTERGENIC	homozygous	55759741
5	143622934	143622935	A	G	6	INTERGENIC	homozygous	55759742
5	143623048	143623049	G	A	6	INTERGENIC	homozygous	55759743
5	143623348	143623349	G	A	6	INTERGENIC	homozygous	55759745
5	143623629	143623630	G	-	13	INTERGENIC	homozygous	55759746
5	143623694	143623695	A	G	20	INTERGENIC	possibly homozygous	55759747
5	143623745	143623746	T	A	5	INTERGENIC	homozygous	55759748
5	143623858	143623859	G	A	9	INTERGENIC	homozygous	55759749
5	143624330	143624331	T	G	6	INTERGENIC	homozygous	55759750
5	143624432	143624433	T	G	8	INTERGENIC	possibly homozygous	55759751
5	143624515	143624516	T	A	11	INTERGENIC	possibly homozygous	55759752
5	143624771	143624772	G	A	12	INTERGENIC	homozygous	55759753
5	143624811	143624812	T	C	2	INTERGENIC	homozygous	55759754
5	143624950	143624951	A	G	7	INTERGENIC	homozygous	55759755
5	143625181	143625182	A	G	12	INTERGENIC	homozygous	55759757
5	143625360	143625361	G	GATGACA	3	INTERGENIC	heterozygous	55759758
5	143625377	143625378	C	T	4	INTERGENIC	heterozygous	55759760
5	143628942	143628943	C	T	4	INTERGENIC	homozygous	55759762
5	143629100	143629101	T	C	18	INTERGENIC	homozygous	55759763
5	143630045	143630046	T	C	4	INTERGENIC	homozygous	55759764
5	143630961	143630962	G	GT	3	INTERGENIC	homozygous	55759767
5	143631092	143631093	A	C	9	INTERGENIC	homozygous	55759769
5	143632448	143632449	T	-	5	INTERGENIC	homozygous	55759770
5	143632754	143632755	A	G	7	INTERGENIC	homozygous	55759771
5	143634421	143634422	A	G	12	INTERGENIC	heterozygous	55759774
5	143634695	143634696	T	C	7	INTERGENIC	homozygous	55759775
5	143637249	143637250	G	T	12	INTERGENIC	heterozygous	55759779
5	143637281	143637282	A	G	9	INTERGENIC	heterozygous	55759780
5	143637980	143637981	C	-	6	INTERGENIC	homozygous	55759781
5	143638049	143638050	A	G	15	INTERGENIC	homozygous	55759782
5	143638276	143638277	G	A	12	INTERGENIC	homozygous	55759783
5	143638334	143638335	C	T	12	INTERGENIC	homozygous	55759784
5	143638948	143639067	AAAAGAAGTTTGGGGGGGTTGGGGATTTAGCTCAGCGGTAGAGCGCTTGCCTAGCAAACGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGAAAAAAAAAAAAAAAAAAAAAA	-----------------------------------------------------------------------------------------------------------------------	5	INTERGENIC	heterozygous	56355267
5	143639129	143639130	C	T	6	INTERGENIC	homozygous	55759796
5	143639575	143639576	A	G	25	INTERGENIC	possibly homozygous	55759797
5	143640178	143640210	TTGCCTGCGCGCGTGCGTGCGTGCGTGCGTGC	--------------------------------	12	INTERGENIC	heterozygous	56355268
5	143640254	143640256	GC	--	6	INTERGENIC	heterozygous	56355269
5	143640333	143640375	TGTCTTTCTCCATGTGTGAAGAGGTCAGAGGTTAATATCAGG	------------------------------------------	11	INTERGENIC	homozygous	56355270
5	143640615	143640616	C	T	14	INTERGENIC	heterozygous	55759803
5	143640723	143640724	G	A	7	INTERGENIC	homozygous	55759806
5	143641078	143641081	GAG	---	3	INTERGENIC	homozygous	55759814
5	143641603	143641604	C	A	3	INTERGENIC	homozygous	55759815
5	143642222	143642223	G	A	8	INTERGENIC	homozygous	55759816
5	143642495	143642496	G	T	7	INTERGENIC	homozygous	55759817
5	143642840	143642841	G	T	2	INTERGENIC	heterozygous	55912877
5	143643166	143643167	A	-	4	GENIC	homozygous	56458416
5	143643236	143643237	C	T	12	GENIC	possibly homozygous	55759819
5	143643306	143643307	C	T	7	GENIC	homozygous	55759820
5	143643428	143643429	C	G	17	GENIC	heterozygous	55759821
5	143643641	143643642	C	T	20	GENIC	possibly homozygous	55759822
5	143645053	143645054	G	GA	7	GENIC	possibly homozygous	55759823
5	143646514	143646515	A	G	1	INTERGENIC	homozygous	55759826
5	143646681	143646682	C	A	4	INTERGENIC	homozygous	55759827
5	143646777	143646778	T	-	3	INTERGENIC	homozygous	55759828
5	143647292	143647293	G	C	8	INTERGENIC	homozygous	55759829
5	143647301	143647305	AAAA	----	5	INTERGENIC	homozygous	55759830
5	143647790	143647791	A	C	24	INTERGENIC	possibly homozygous	55759831
5	143648100	143648101	C	CA	12	INTERGENIC	heterozygous	55759833
5	143648682	143648683	G	A	9	INTERGENIC	homozygous	55759834
5	143649224	143649225	G	T	12	INTERGENIC	heterozygous	55759835
5	143649654	143649655	A	C	1	INTERGENIC	homozygous	56458422
5	143649660	143649662	CA	--	1	INTERGENIC	homozygous	55759836
5	143649841	143649842	G	A	7	GENIC	possibly homozygous	55759837
5	143650275	143650276	C	T	13	GENIC	heterozygous	55759838
5	143650874	143650875	T	-	1	GENIC	homozygous	56125364
5	143652921	143652922	C	CT	2	GENIC	heterozygous	55759839
5	143653825	143653828	TTT	---	3	GENIC	heterozygous	56125365
5	143653991	143653992	A	G	7	GENIC	heterozygous	55759845
5	143654080	143654081	T	A	2	GENIC	heterozygous	55759849
5	143654085	143654086	A	AT	2	GENIC	heterozygous	56125366
5	143654168	143654169	A	G	3	GENIC	homozygous	55759851
5	143654180	143654181	C	G	4	GENIC	homozygous	55759852
5	143654658	143654659	A	G	7	GENIC	possibly homozygous	55759854
5	143656319	143656320	T	C	14	GENIC	homozygous	55759855
5	143657836	143657837	G	-	8	GENIC	heterozygous	55759861
5	143663904	143663905	A	G	14	GENIC	homozygous	55759870
5	143664036	143664037	A	-	8	GENIC	possibly homozygous	55759871
5	143664037	143664038	A	T	9	GENIC	heterozygous	56355271
5	143664536	143664537	A	G	8	GENIC	possibly homozygous	55759873
5	143665462	143665463	A	-	3	INTERGENIC	heterozygous	56675594
5	143667451	143667452	A	AC	1	INTERGENIC	homozygous	55759878
5	143668477	143668478	C	G	5	INTERGENIC	heterozygous	55759880
5	143668685	143668686	G	A	5	INTERGENIC	heterozygous	55759882
5	143671237	143671238	T	C	19	INTERGENIC	possibly homozygous	55759884
5	143671503	143671504	C	A	3	INTERGENIC	homozygous	55759885
5	143671720	143671721	T	G	7	INTERGENIC	possibly homozygous	55759887
5	143672642	143672643	T	-	2	INTERGENIC	homozygous	55759888
5	143673735	143673736	A	-	3	INTERGENIC	homozygous	56067692
5	143676382	143676383	A	G	12	INTERGENIC	homozygous	55759895
5	143677942	143677943	A	T	4	INTERGENIC	heterozygous	55759901
5	143677946	143677948	GG	--	4	INTERGENIC	heterozygous	56355272
5	143677949	143677950	G	GAAA	2	INTERGENIC	heterozygous	56355273
5	143677951	143677952	G	A	3	INTERGENIC	heterozygous	56355274
5	143678337	143678338	G	A	14	INTERGENIC	possibly homozygous	55759904
5	143678734	143678735	A	G	7	GENIC	possibly homozygous	55759905
5	143679011	143679012	A	G	4	GENIC	heterozygous	55759906
5	143679958	143679959	T	C	9	GENIC	homozygous	55759907
5	143682145	143682146	T	C	10	GENIC	homozygous	55759909
5	143682560	143682594	TACAATGAGGCTGCTTACCTGAGTGAGGTTCCAC	----------------------------------	1	GENIC	homozygous	56355275
5	143682728	143682729	C	T	2	GENIC	homozygous	55759911
5	143686807	143686808	G	T	7	GENIC	homozygous	55759912
5	143688288	143688289	A	G	15	GENIC	homozygous	55759913
5	143688655	143688656	G	T	16	GENIC	homozygous	55759914
5	143690736	143690737	A	AT	13	GENIC	homozygous	55759917
5	143693693	143693694	G	C	9	GENIC	homozygous	55759920
5	143696459	143696460	C	G	5	GENIC	heterozygous	55759921
5	143696798	143696799	G	A	10	GENIC	homozygous	55759922
5	143697731	143697732	T	C	9	GENIC	homozygous	55759923
5	143698524	143698525	C	T	13	GENIC	homozygous	55759924
5	143703805	143703806	A	-	3	GENIC	homozygous	55912992
5	143704426	143704427	T	C	13	GENIC	homozygous	55759925
5	143704543	143704544	T	C	5	GENIC	heterozygous	55759926
5	143705116	143705117	G	GAA	1	GENIC	homozygous	55759927
5	143705391	143705394	CTC	---	2	GENIC	homozygous	55759928
5	143705594	143705595	C	CGA	9	GENIC	homozygous	55759929
5	143705745	143705746	C	T	11	GENIC	heterozygous	55759930
5	143705936	143705937	C	T	16	GENIC	possibly homozygous	55759931
5	143707635	143707636	C	T	12	GENIC	homozygous	55759938
5	143708186	143708187	A	AAC	7	GENIC	possibly homozygous	55759940
5	143708838	143708839	C	T	11	GENIC	homozygous	55759941
5	143709481	143709482	T	TC	3	GENIC	heterozygous	55759942
5	143710055	143710056	A	T	13	GENIC	homozygous	55759945
5	143710375	143710376	A	AATGGC	5	GENIC	heterozygous	55759946
5	143711173	143711174	T	TA	10	GENIC	homozygous	55759947
5	143713452	143713453	A	G	19	GENIC	possibly homozygous	55759948
5	143713656	143713657	G	A	3	GENIC	homozygous	55759949