chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 121536701 121536704 AAT --- 8 GENIC homozygous 55676961 5 121537160 121537161 C T 13 GENIC homozygous 55676963 5 121537591 121537592 G GT 7 GENIC homozygous 55676965 5 121538376 121538377 A AATC 7 GENIC homozygous 55676967 5 121540425 121540426 T TCA 7 GENIC homozygous 55676969 5 121541101 121541102 A G 8 GENIC homozygous 55676973 5 121541913 121541914 C T 8 GENIC homozygous 55676983 5 121542165 121542166 A G 7 GENIC homozygous 55676985 5 121542679 121542680 T - 5 GENIC homozygous 55676987 5 121542837 121542838 A G 6 GENIC homozygous 55676989 5 121543882 121543883 A ACG 1 GENIC homozygous 56492683 5 121546594 121546596 GG -- 1 GENIC homozygous 55676999 5 121547523 121547524 C T 12 GENIC homozygous 55677003 5 121550310 121550311 T - 2 GENIC homozygous 55677007 5 121550330 121550331 A AAT 2 GENIC homozygous 55677009 5 121550415 121550416 A AGGG 2 GENIC homozygous 55677011 5 121550951 121550952 A AAAAAAACAAAAC 10 GENIC heterozygous 56447404 5 121543883 121543884 T G 4 GENIC homozygous 56447400 5 121544218 121544220 GG -- 3 GENIC homozygous 56447401 5 121544348 121544349 T TACAGCCTGTGTTTGCACTGCGGGAGACCCTGTGCGCTTTATACAACAA 5 GENIC homozygous 56447402 5 121550959 121550960 A AC 8 GENIC possibly homozygous 56447405 5 121551437 121551438 C T 9 GENIC homozygous 55677020 5 121551469 121551470 T C 7 GENIC homozygous 55677022 5 121553007 121553008 T A 8 GENIC homozygous 55677024 5 121554547 121554548 C T 17 GENIC homozygous 55677026 5 121556295 121556296 A AT 5 GENIC homozygous 55677028 5 121556329 121556330 T C 9 GENIC homozygous 55677030 5 121557455 121557456 G T 3 GENIC homozygous 55677034 5 121561265 121561266 C G 9 GENIC homozygous 55677042 5 121561884 121561885 T C 11 GENIC homozygous 55677044 5 121562389 121562390 T TCTCACACACACACACACACGCACACGCACA 8 GENIC heterozygous 56447407 5 121562826 121562827 A G 9 GENIC homozygous 55677048 5 121563117 121563118 A G 7 GENIC homozygous 55677050 5 121563339 121563340 T C 6 GENIC homozygous 55677052 5 121563917 121563918 T G 20 GENIC homozygous 55677054 5 121564423 121564433 CACACACACA ---------- 2 GENIC heterozygous 56447408 5 121564425 121564433 CACACACA -------- 2 GENIC heterozygous 56447409 5 121565242 121565243 G GTT 1 GENIC homozygous 55677060 5 121566290 121566291 C T 4 GENIC homozygous 55677064 5 121567784 121567785 A G 17 GENIC homozygous 55677066 5 121567878 121567879 C T 10 GENIC homozygous 55677068 5 121568148 121568149 G A 14 GENIC homozygous 55677070 5 121568163 121568164 C T 14 GENIC homozygous 55677072 5 121568247 121568248 A T 10 GENIC homozygous 55677074 5 121568504 121568505 A AGC 6 GENIC homozygous 55677076 5 121568511 121568512 G A 6 GENIC homozygous 55677078 5 121568554 121568555 G A 6 GENIC homozygous 55677080 5 121568723 121568724 C CCT 6 GENIC homozygous 55677086 5 121569702 121569703 T G 2 GENIC homozygous 55677088 5 121569707 121569708 C - 3 GENIC homozygous 55677090 5 121569940 121569941 A T 4 GENIC homozygous 55677092 5 121573389 121573390 G A 2 GENIC heterozygous 56228809 5 121575478 121575479 T TTTG 9 GENIC homozygous 55677096 5 121576018 121576019 G A 8 GENIC homozygous 55677098 5 121576116 121576143 TATATATATATATATATATACATATAT --------------------------- 2 GENIC homozygous 55677100 5 121578772 121578773 A G 8 GENIC homozygous 55677102 5 121580083 121580084 A - 4 GENIC homozygous 55677104 5 121580535 121580536 T C 10 GENIC homozygous 55677106 5 121580609 121580610 C T 10 GENIC homozygous 55677108 5 121580796 121580797 G A 9 GENIC homozygous 55677110 5 121582572 121582573 T C 13 GENIC homozygous 55677112 5 121582758 121582759 T C 14 GENIC homozygous 55677114 5 121583257 121583258 A G 6 GENIC homozygous 55677116 5 121583265 121583266 A AG 7 GENIC homozygous 55677118 5 121583269 121583270 C CACACACACACACA 4 GENIC homozygous 56447412 5 121583275 121583276 C A 7 GENIC homozygous 55677126 5 121583441 121583442 G A 22 GENIC homozygous 55677128 5 121583596 121583597 C T 12 GENIC homozygous 55677130 5 121583650 121583651 A AT 5 GENIC homozygous 55677132 5 121584416 121584417 G T 7 GENIC homozygous 55677134 5 121585338 121585339 A C 9 GENIC homozygous 55677136 5 121589144 121589145 G A 10 GENIC homozygous 55677154 5 121589240 121589241 C T 8 GENIC homozygous 55677156 5 121590495 121590496 C T 10 GENIC homozygous 55677182 5 121590794 121590803 GCTGAGCAA --------- 7 GENIC homozygous 55677188 5 121591149 121591151 GT -- 8 GENIC homozygous 55677192 5 121591152 121591155 TTG --- 8 GENIC homozygous 55677194 5 121591328 121591329 A C 12 GENIC homozygous 55677196 5 121591409 121591410 C T 7 GENIC homozygous 55677198 5 121591827 121591835 ACACACAC -------- 4 GENIC homozygous 55677200 5 121591960 121591961 C T 9 GENIC homozygous 55677202 5 121592165 121592166 T TA 5 GENIC homozygous 55677204 5 121595243 121595244 C T 4 GENIC homozygous 55677206 5 121596870 121596871 G A 12 GENIC homozygous 55677208 5 121597418 121597419 G T 9 GENIC homozygous 55677210 5 121597481 121597482 T C 9 GENIC homozygous 55677212 5 121597892 121597893 A - 10 GENIC homozygous 55677214 5 121598205 121598206 A G 11 GENIC homozygous 55677216 5 121600409 121600410 G GT 10 GENIC homozygous 55677218 5 121601181 121601182 A C 11 GENIC homozygous 55677220 5 121602242 121602245 CCC --- 2 GENIC homozygous 55677222 5 121602682 121602683 T A 12 GENIC homozygous 55677224 5 121602807 121602808 C T 9 GENIC homozygous 55677226 5 121603734 121603735 C T 8 GENIC homozygous 55677228 5 121605793 121605794 G - 4 GENIC homozygous 55677232 5 121606072 121606073 C T 11 GENIC homozygous 55677233 5 121606291 121606292 A G 4 GENIC homozygous 55677235 5 121606663 121606664 G A 8 GENIC homozygous 55677237 5 121607172 121607173 A C 9 GENIC homozygous 55677239 5 121607288 121607289 A G 13 GENIC homozygous 55677241 5 121607347 121607348 C T 9 GENIC homozygous 55677243 5 121607414 121607415 A - 6 GENIC homozygous 55677245 5 121608116 121608117 A AGG 14 GENIC homozygous 55677247 5 121608532 121608533 C T 9 GENIC homozygous 55677249 5 121608618 121608619 C T 12 GENIC homozygous 55677251 5 121609230 121609231 T C 10 GENIC homozygous 55677253 5 121609539 121609540 C CGT 3 GENIC homozygous 56447416 5 121610111 121610112 A - 10 GENIC homozygous 55677257 5 121610378 121610379 C CAAAAAA 5 GENIC homozygous 55677259 5 121610591 121610592 T C 12 GENIC homozygous 55677261 5 121610698 121610699 A G 11 GENIC homozygous 55677263 5 121613032 121613033 A ATGTG 3 GENIC homozygous 55677265 5 121613570 121613571 C T 9 GENIC homozygous 55677267 5 121616272 121616273 G A 9 GENIC homozygous 55677269 5 121616802 121616803 T TTTTG 10 GENIC homozygous 55677271 5 121616897 121616898 A T 9 GENIC homozygous 55677273 5 121619349 121619350 A - 6 GENIC homozygous 55677281 5 121621150 121621151 A AACACACAC 6 GENIC homozygous 56447418 5 121621289 121621290 A G 8 GENIC homozygous 55677283 5 121623090 121623091 G A 9 GENIC homozygous 55677285 5 121624303 121624304 G GA 14 GENIC homozygous 55677289 5 121629522 121629523 A ATT 11 GENIC homozygous 55677291 5 121629593 121629594 C T 10 GENIC homozygous 55677293 5 121629929 121629930 C A 13 GENIC homozygous 55677295 5 121630636 121630637 G A 10 GENIC homozygous 55677297 5 121632091 121632092 G A 6 GENIC homozygous 55677299 5 121633278 121633279 T C 6 GENIC homozygous 55677323 5 121633668 121633669 A AG 7 GENIC homozygous 55677325 5 121635276 121635277 G A 8 GENIC homozygous 55677329 5 121635308 121635309 C CCA 7 GENIC possibly homozygous 55677331 5 121635346 121635347 C A 10 GENIC homozygous 55677333 5 121637945 121637946 A AT 12 GENIC homozygous 55677339 5 121635348 121635349 C A 9 GENIC homozygous 55677335 5 121636339 121636340 G T 7 GENIC homozygous 55677337 5 121632869 121632889 TTAGTTACAGGTGTGCAGGG -------------------- 3 GENIC homozygous 56353150 5 121641323 121641324 C - 13 GENIC homozygous 55677341 5 121641554 121641555 C T 15 GENIC homozygous 55677343 5 121641568 121641569 A G 15 GENIC homozygous 55677345 5 121642448 121642449 C A 12 GENIC homozygous 55677347 5 121643501 121643502 C T 14 GENIC homozygous 55677349 5 121644804 121644805 T A 10 GENIC homozygous 55677351 5 121644927 121644928 C T 11 GENIC homozygous 55677353 5 121645322 121645323 A G 9 GENIC homozygous 55677355 5 121646209 121646210 T C 8 GENIC homozygous 55677357 5 121646332 121646333 G A 6 GENIC homozygous 55677359 5 121646397 121646398 C A 11 GENIC homozygous 55677361 5 121646790 121646791 A - 5 GENIC homozygous 55677363 5 121647103 121647104 G A 8 GENIC homozygous 55677365 5 121648027 121648028 C T 18 GENIC homozygous 55677367 5 121648223 121648224 G - 7 GENIC homozygous 55677369 5 121648384 121648387 TTC --- 7 GENIC homozygous 55677373 5 121649151 121649152 C - 2 GENIC homozygous 55677375 5 121649715 121649716 C T 11 GENIC homozygous 55677377 5 121650440 121650441 C - 7 GENIC homozygous 55677379 5 121650565 121650566 A C 13 GENIC homozygous 55677381 5 121652404 121652405 A G 9 GENIC heterozygous 56562424 5 121652627 121652629 AA -- 9 GENIC heterozygous 56228947 5 121652628 121652629 A - 9 GENIC possibly homozygous 55677383 5 121653188 121653190 AC -- 9 GENIC heterozygous 56228949 5 121653219 121653220 G GCA 5 GENIC heterozygous 55677385 5 121654509 121654510 C G 16 GENIC homozygous 55677389 5 121655010 121655011 G A 10 GENIC homozygous 55677391 5 121655544 121655545 G C 11 GENIC homozygous 55677393 5 121655734 121655735 C T 11 GENIC homozygous 55677395 5 121655802 121655803 C A 11 GENIC homozygous 55677397 5 121655876 121655877 G A 9 GENIC homozygous 55677399 5 121655878 121655882 ATGG ---- 9 GENIC homozygous 55677401 5 121655901 121655902 G A 9 GENIC homozygous 55677403 5 121656441 121656442 C T 14 GENIC homozygous 55677405 5 121658158 121658159 T A 14 GENIC homozygous 55677411 5 121660956 121660957 C - 15 GENIC homozygous 55677413 5 121661565 121661566 A T 7 GENIC homozygous 55677415 5 121661805 121661806 G A 4 GENIC homozygous 55677417 5 121662845 121662846 C CCACACA 2 GENIC homozygous 55677419 5 121663479 121663480 T TC 8 GENIC homozygous 55677425 5 121663876 121663877 G GAAA 4 GENIC homozygous 56447419 5 121664778 121664779 G GT 7 GENIC homozygous 55677427 5 121665709 121665710 A G 11 GENIC homozygous 55677429 5 121665822 121665823 G A 9 GENIC homozygous 55677431 5 121665898 121665921 ACATGTGTGCATATGATATAGAG ----------------------- 5 GENIC homozygous 56353151 5 121666625 121666626 C T 8 GENIC homozygous 55677437 5 121667510 121667511 C A 13 GENIC homozygous 55677439 5 121667892 121668008 AAAGAAAAGCAAACCAGGTTGGGGATTTAGCTCAGTGGTAGAGCACCTGCCTAGCAAGCTCAAGGCCTGGGTTCGGTCCCCAGCTCCGAAAAAAATAAAAGAAAAGAAAAAGAAGG -------------------------------------------------------------------------------------------------------------------- 9 GENIC homozygous 56353152 5 121668616 121668624 ATGTATGT -------- 6 GENIC homozygous 55677441 5 121669437 121669457 AGAAAGAAAGAAAGAAAGAA -------------------- 1 GENIC homozygous 56447420 5 121669865 121669866 G A 8 GENIC homozygous 55677449 5 121670242 121670243 C T 6 GENIC homozygous 55677451 5 121670749 121670750 G A 10 GENIC homozygous 55677453 5 121670769 121670770 T A 9 GENIC homozygous 55677455 5 121671568 121671569 A G 5 GENIC homozygous 55677457 5 121671831 121671832 G GAAAA 3 GENIC homozygous 56447422 5 121671836 121671838 GG -- 4 GENIC homozygous 56447423 5 121671854 121671855 A AAAAG 4 GENIC homozygous 56447424 5 121672202 121672204 TT -- 1 GENIC homozygous 56492689 5 121672224 121672225 C T 4 GENIC homozygous 56447425 5 121672425 121672426 C A 6 GENIC homozygous 55677467 5 121674883 121674884 A G 12 GENIC homozygous 55677469 5 121675981 121675982 A AACACACAC 3 GENIC heterozygous 56447426 5 121675981 121675982 A AACACACACAC 3 GENIC heterozygous 56447427 5 121676026 121676027 C T 10 GENIC homozygous 55677471 5 121676123 121676124 C G 5 GENIC homozygous 55677473 5 121676125 121676126 G GAGAC 3 GENIC homozygous 55677475 5 121678110 121678111 C G 14 GENIC homozygous 55677477 5 121678421 121678422 G T 15 GENIC homozygous 55677479 5 121679111 121679112 A G 14 GENIC homozygous 55677483 5 121679423 121679424 C CACA 7 GENIC homozygous 55677485 5 121680233 121680234 G A 11 GENIC homozygous 55677487 5 121680312 121680313 T A 11 GENIC homozygous 55677489 5 121681536 121681538 AA -- 3 GENIC homozygous 56185343 5 121682471 121682472 G A 8 GENIC homozygous 55677495 5 121682728 121682729 C T 8 GENIC homozygous 55677497 5 121682771 121682779 AAAAAAAA -------- 6 GENIC homozygous 55677499 5 121682834 121682835 G A 9 GENIC homozygous 55677501 5 121683417 121683418 A T 3 GENIC homozygous 55677509 5 121683418 121683419 A T 3 GENIC homozygous 55892748 5 121683419 121683420 A T 3 GENIC homozygous 55677511 5 121683443 121683444 T A 3 GENIC homozygous 55677513 5 121683571 121683572 C - 8 GENIC homozygous 55677515 5 121683578 121683579 C - 8 GENIC homozygous 55677517 5 121683786 121683787 C CT 7 GENIC homozygous 55677519 5 121684168 121684169 T C 13 GENIC homozygous 55677521 5 121684540 121684541 G A 12 GENIC homozygous 55677523 5 121684751 121684752 G GA 3 GENIC homozygous 55677527 5 121685093 121685094 T C 7 GENIC homozygous 55677529 5 121685359 121685360 T A 8 GENIC homozygous 55677531 5 121686441 121686442 T C 14 GENIC homozygous 55677533 5 121687519 121687520 T TATAAATAAATAAATAA 1 GENIC homozygous 56447430 5 121687651 121687652 C T 5 GENIC homozygous 55677537 5 121687657 121687658 T - 5 GENIC homozygous 55677539 5 121690633 121690634 A G 8 GENIC homozygous 55677541 5 121691399 121691400 G GTC 3 GENIC homozygous 55677543 5 121691417 121691418 A G 3 GENIC homozygous 55677545 5 121692224 121692254 AGGGGTATGGGATAGGGGGGGGAGGGGAAC ------------------------------ 3 GENIC homozygous 55677547 5 121692477 121692478 A T 14 GENIC homozygous 55677549 5 121692790 121692791 C T 14 GENIC homozygous 55677551 5 121695272 121695273 G A 9 GENIC homozygous 55677553 5 121695643 121695645 TT -- 4 GENIC homozygous 55677555 5 121704392 121704393 C T 9 GENIC homozygous 55677575 5 121698986 121698987 G GTGT 6 GENIC heterozygous 55677561 5 121699975 121699976 A - 8 GENIC homozygous 55677565 5 121700108 121700109 G A 12 GENIC homozygous 55677567 5 121701085 121701086 T G 9 GENIC homozygous 55677569 5 121702252 121702253 A C 6 GENIC homozygous 55677571 5 121702469 121702470 C T 14 GENIC homozygous 55677573 5 121704682 121704685 TCT --- 10 GENIC homozygous 55677577 5 121704912 121704913 C T 8 GENIC homozygous 55677579 5 121705392 121705393 C G 12 GENIC homozygous 55677581 5 121705690 121705698 CAGTAATA -------- 9 GENIC homozygous 55677583 5 121706086 121706087 T C 2 GENIC homozygous 55677585 5 121708008 121708009 T TCA 2 GENIC homozygous 56447432 5 121708029 121708045 TGTGTGTGTGTGAGAG ---------------- 5 GENIC homozygous 56447433 5 121708280 121708281 T A 13 GENIC homozygous 55677593 5 121708361 121708362 A G 11 GENIC homozygous 55677595 5 121709092 121709093 T C 9 GENIC homozygous 55677597 5 121709175 121709179 AAAA ---- 12 GENIC homozygous 55892751 5 121709443 121709444 A C 10 GENIC homozygous 55677601 5 121710118 121710119 G C 15 GENIC homozygous 55677603 5 121712275 121712276 G GCACA 8 GENIC homozygous 55677605 5 121712311 121712312 G GCA 2 GENIC heterozygous 56447434 5 121712313 121712314 T TCG 2 GENIC heterozygous 56447435 5 121712327 121712328 T TCGCG 3 GENIC heterozygous 56447436 5 121712333 121712334 T TCTCG 3 GENIC heterozygous 56447437 5 121713461 121713462 C - 13 GENIC homozygous 55677615 5 121713683 121713684 A G 8 GENIC homozygous 55677617 5 121713730 121713731 C A 12 GENIC homozygous 55677619 5 121713751 121713752 G A 13 GENIC homozygous 55677621 5 121714132 121714133 A G 11 GENIC homozygous 55677623 5 121714905 121714909 AAAA ---- 6 GENIC homozygous 56447439 5 121715041 121715042 A AACCAG 14 GENIC homozygous 55677627 5 121715044 121715045 T TG 14 GENIC homozygous 55677629 5 121717120 121717121 C T 7 GENIC homozygous 55677635 5 121717255 121717257 AC -- 7 GENIC heterozygous 55677637 5 121717623 121717630 GGGGGGG ------- 10 GENIC homozygous 56447441 5 121717628 121717629 G GTTAAAT 11 GENIC possibly homozygous 56447442 5 121717985 121717986 G A 7 GENIC homozygous 55677643 5 121718048 121718049 C T 8 GENIC homozygous 55677645