chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 90675341 90675342 T C 54 GENIC homozygous 55546251 5 90675342 90675343 G C 55 GENIC homozygous 55546253 5 90676737 90676738 T TA 9 GENIC homozygous 55546255 5 90678606 90678607 A C 19 GENIC homozygous 55546257 5 90679038 90679039 G A 16 GENIC homozygous 55546259 5 90679539 90679540 T G 12 GENIC homozygous 55546261 5 90680047 90680048 C T 14 GENIC homozygous 55546263 5 90681847 90681848 T G 17 GENIC homozygous 55546265 5 90682254 90682255 G GC 5 GENIC heterozygous 55546267 5 90686033 90686034 T - 1 GENIC homozygous 55546289 5 90688555 90688556 A - 5 GENIC homozygous 55546308 5 90688606 90688607 T G 7 GENIC homozygous 55546310 5 90688723 90688724 T G 8 GENIC homozygous 55888342 5 90688724 90688725 C G 8 GENIC homozygous 55888343 5 90688725 90688726 T A 8 GENIC homozygous 55888344 5 90688746 90688747 A T 8 GENIC homozygous 55546312 5 90688979 90688980 C A 10 GENIC homozygous 55546314 5 90689059 90689060 G - 15 GENIC homozygous 55546316 5 90689170 90689171 G A 7 GENIC homozygous 55546318 5 90689272 90689273 G T 12 GENIC homozygous 55546320 5 90690094 90690095 C T 23 GENIC homozygous 55546322 5 90690914 90690915 T C 35 GENIC homozygous 55546324 5 90691753 90691754 C A 25 GENIC possibly homozygous 55546326 5 90691898 90691899 G A 22 GENIC homozygous 55546328 5 90692307 90692308 C CAAAA 4 GENIC heterozygous 56037450 5 90693621 90693622 C T 31 GENIC homozygous 55546334 5 90694268 90694269 G A 17 GENIC homozygous 55546336 5 90694445 90694446 T TA 8 GENIC homozygous 55546338 5 90695067 90695068 G A 16 GENIC homozygous 55546340 5 90695134 90695135 T C 20 GENIC homozygous 55546342 5 90695676 90695677 G A 18 GENIC homozygous 55546344 5 90696425 90696426 T C 29 GENIC homozygous 55546346 5 90696652 90696653 A G 20 GENIC homozygous 55546348 5 90696988 90696989 A T 25 GENIC homozygous 55546350 5 90697253 90697254 G A 19 GENIC homozygous 55546352 5 90697593 90697594 G A 20 GENIC homozygous 55546354 5 90697700 90697701 C T 21 GENIC homozygous 55546356 5 90698982 90698983 T C 33 GENIC homozygous 55546358 5 90699337 90699338 A G 9 GENIC homozygous 55546360 5 90699534 90699535 C T 10 GENIC homozygous 55546362 5 90699741 90699742 A - 15 GENIC homozygous 55546364 5 90699914 90699915 A - 12 GENIC homozygous 55546366 5 90699919 90699920 A T 14 GENIC homozygous 56562016 5 90700227 90700228 C T 29 GENIC homozygous 55546368 5 90701164 90701165 T G 18 GENIC homozygous 55546370 5 90701177 90701178 A C 15 GENIC homozygous 55546372 5 90701251 90701252 A - 11 GENIC homozygous 55546374 5 90702081 90702082 C G 51 GENIC homozygous 55546376 5 90702459 90702460 A AT 20 GENIC homozygous 55546378 5 90702621 90702622 T C 21 GENIC homozygous 55546380 5 90703313 90703314 C T 39 GENIC homozygous 55546382 5 90704006 90704007 A AAAACTAAACTAAACTAAACTAAACTAAACT 13 GENIC homozygous 56562017 5 90704044 90704045 G A 19 GENIC homozygous 55546384 5 90704065 90704066 T C 25 GENIC homozygous 55546388 5 90704634 90704635 C G 29 GENIC homozygous 55546390 5 90705816 90705817 T C 38 GENIC homozygous 55546394 5 90706174 90706175 C A 27 GENIC homozygous 55546396 5 90706355 90706356 T C 37 GENIC homozygous 55546398 5 90707142 90707143 T C 23 GENIC homozygous 55546400 5 90707185 90707186 T C 26 GENIC homozygous 55546402 5 90708243 90708244 A C 29 GENIC homozygous 55546406 5 90709420 90709421 G GA 18 GENIC homozygous 55546408 5 90710012 90710013 C CGTT 13 GENIC possibly homozygous 55546411 5 90710500 90710501 C CT 26 GENIC homozygous 55546413 5 90710791 90710792 G A 13 GENIC homozygous 55546415 5 90710803 90710812 TACTACTAC --------- 8 GENIC homozygous 55546417 5 90710844 90710845 A C 12 GENIC homozygous 55546419 5 90710852 90710853 A G 12 GENIC homozygous 55546421 5 90711364 90711365 A AGCCCT 19 GENIC homozygous 55546423 5 90711365 90711366 A AGTT 19 GENIC homozygous 55546425 5 90711493 90711494 C A 27 GENIC homozygous 55546427 5 90711851 90711852 A AT 5 GENIC homozygous 55546429 5 90711912 90711914 AA -- 7 GENIC heterozygous 56433149 5 90712137 90712138 C T 27 GENIC homozygous 55546435 5 90712345 90712346 G T 12 GENIC homozygous 55546437 5 90712838 90712839 C - 21 GENIC homozygous 55546439 5 90713436 90713437 T G 16 GENIC homozygous 55546441 5 90714041 90714042 C T 10 GENIC homozygous 55546443 5 90714580 90714581 C A 17 GENIC homozygous 55546445 5 90715131 90715132 T C 25 GENIC homozygous 55546449 5 90715489 90715490 T A 23 GENIC homozygous 55546451 5 90716157 90716158 T C 51 GENIC homozygous 55546453 5 90717501 90717502 T G 11 GENIC homozygous 55546455 5 90717744 90717745 T G 7 GENIC homozygous 55546457 5 90718588 90718589 A AGGCT 17 GENIC homozygous 55546459 5 90718944 90718945 A AAAC 8 GENIC homozygous 55546461 5 90719577 90719578 A G 26 GENIC homozygous 55546463 5 90719757 90719758 T TAAACAAAC 16 GENIC homozygous 55546465 5 90720654 90720666 GTGTGCGTGTGT ------------ 20 GENIC homozygous 56562018 5 90720673 90720674 T A 14 GENIC homozygous 56562019 5 90720710 90720752 GTGCGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGT ------------------------------------------ 13 GENIC homozygous 56615762 5 90720755 90720757 CA -- 9 GENIC homozygous 56615764 5 90721281 90721282 T TG 14 GENIC homozygous 55546475 5 90721353 90721354 A G 16 GENIC homozygous 55546477 5 90721375 90721376 G C 19 GENIC homozygous 55546479 5 90721443 90721444 T G 15 GENIC homozygous 55546481 5 90721933 90721934 A G 23 GENIC homozygous 55546483 5 90722254 90722255 G C 30 GENIC homozygous 55546485 5 90722911 90722912 T C 8 GENIC homozygous 55546487 5 90722940 90722941 C G 10 GENIC homozygous 55546489 5 90723002 90723003 C G 12 GENIC homozygous 55546491 5 90723008 90723009 T C 13 GENIC homozygous 55546493 5 90723252 90723253 A G 13 GENIC homozygous 55546495 5 90723497 90723498 T TCAAAACAAAACAAAACAAAA 20 GENIC homozygous 56615767 5 90724512 90724513 C CACA 33 GENIC homozygous 55546503 5 90724656 90724657 C CT 20 GENIC homozygous 55546505 5 90724703 90724704 C CATGCTAG 7 GENIC homozygous 56433159 5 90724707 90724708 A AGCGCTCTAC 7 GENIC homozygous 56433161 5 90724709 90724710 A AC 7 GENIC homozygous 56433163 5 90724713 90724716 ACG --- 7 GENIC homozygous 56433165 5 90724742 90724743 G GAAATCCCCAA 8 GENIC homozygous 56433167 5 90725065 90725066 C G 21 GENIC homozygous 55546507 5 90725632 90725633 A - 7 GENIC possibly homozygous 55546509 5 90726430 90726431 T C 12 GENIC homozygous 55546511 5 90726726 90726727 T C 22 GENIC homozygous 55546513 5 90728032 90728033 T A 29 GENIC homozygous 55546515 5 90729670 90729672 CC -- 5 GENIC heterozygous 55546517 5 90729671 90729672 C - 5 GENIC heterozygous 55546519 5 90729762 90729763 G A 27 GENIC homozygous 55546521 5 90730281 90730282 A - 17 GENIC homozygous 55546523 5 90730644 90730654 TTTTGTTTTG ---------- 17 GENIC homozygous 55546525 5 90731159 90731160 G A 19 GENIC homozygous 55546527 5 90731355 90731356 A G 20 GENIC homozygous 55546529 5 90731995 90731996 A T 20 GENIC homozygous 55546531 5 90733922 90733923 T A 20 GENIC homozygous 55546533 5 90734018 90734019 A AC 17 GENIC homozygous 55546535 5 90734039 90734040 T C 23 GENIC homozygous 56433169 5 90734045 90734046 C CACACCA 17 GENIC heterozygous 56615769 5 90734045 90734046 C CACCACACACA 17 GENIC heterozygous 56489650 5 90734786 90734787 C T 9 GENIC homozygous 55546545 5 90734797 90734798 T C 9 GENIC homozygous 55546547 5 90735897 90735898 A G 27 GENIC homozygous 55546549 5 90736107 90736108 T C 24 GENIC homozygous 55546551 5 90736713 90736714 T TC 27 GENIC homozygous 55546553 5 90738440 90738442 TC -- 18 GENIC homozygous 55546555 5 90738481 90738482 T - 17 GENIC homozygous 55546557 5 90742306 90742307 C A 16 GENIC possibly homozygous 55546613 5 90742320 90742321 A G 14 GENIC homozygous 55546615 5 90742347 90742348 A ATT 13 GENIC homozygous 55546617 5 90743101 90743102 A G 23 GENIC homozygous 55546619 5 90743268 90743278 TGTCTCTGTC ---------- 8 GENIC homozygous 55546621 5 90743522 90743523 C T 36 GENIC homozygous 55546625 5 90744875 90744876 T TC 10 GENIC homozygous 55546627 5 90745836 90745837 G A 27 GENIC homozygous 55546629 5 90746501 90746502 T C 26 GENIC homozygous 55546631 5 90746521 90746522 C G 25 GENIC homozygous 55546633 5 90746538 90746539 T C 24 GENIC homozygous 55546635 5 90746614 90746615 A T 19 GENIC homozygous 55546637 5 90746628 90746630 AA -- 16 GENIC homozygous 55546639 5 90747599 90747600 C A 20 GENIC homozygous 55546643 5 90747645 90747651 ACACAC ------ 12 GENIC possibly homozygous 56615771 5 90747702 90747703 T TAC 22 GENIC possibly homozygous 55546647 5 90748180 90748181 G T 28 GENIC homozygous 55546649 5 90749671 90749672 A G 41 GENIC homozygous 55546651 5 90750493 90750494 G A 23 GENIC homozygous 55546653 5 90750699 90750700 T TATA 13 GENIC homozygous 55546657 5 90750701 90750702 T A 15 GENIC homozygous 56433177 5 90750783 90750784 T C 13 GENIC homozygous 55546659 5 90751049 90751050 C T 12 GENIC homozygous 55546661 5 90751798 90751799 A G 24 GENIC homozygous 55546663 5 90751939 90751940 A G 45 GENIC homozygous 55546666 5 90752422 90752423 A AT 29 GENIC homozygous 55546668 5 90753219 90753220 T A 25 GENIC homozygous 55546670 5 90755119 90755120 A G 14 GENIC homozygous 55546674 5 90755278 90755279 T G 16 GENIC homozygous 55546676 5 90756072 90756073 G C 17 GENIC homozygous 55546678 5 90756403 90756404 C - 20 GENIC homozygous 55546680 5 90756526 90756527 C T 27 GENIC homozygous 55546682 5 90757451 90757455 CACA ---- 8 GENIC homozygous 55546688 5 90758118 90758119 A G 33 GENIC homozygous 55546690 5 90758420 90758421 C A 34 GENIC homozygous 55546692 5 90758509 90758510 C A 28 GENIC homozygous 55546694 5 90758529 90758530 G A 25 GENIC homozygous 55546696 5 90759407 90759408 C T 13 GENIC homozygous 55546698 5 90759498 90759499 C A 17 GENIC homozygous 55546700 5 90760636 90760637 T G 34 GENIC homozygous 55546702 5 90761041 90761042 T C 41 GENIC homozygous 55546704 5 90761074 90761075 G C 42 GENIC homozygous 55546706 5 90761254 90761255 T G 17 GENIC homozygous 55546708 5 90762993 90762994 G A 18 GENIC homozygous 55546710 5 90763010 90763011 T C 19 GENIC homozygous 55546712 5 90763210 90763211 C CAAA 10 GENIC heterozygous 55546714 5 90763210 90763211 C CA 10 GENIC heterozygous 55546716 5 90764109 90764112 TTC --- 13 GENIC homozygous 55546718 5 90766330 90766331 G A 24 GENIC homozygous 55546722 5 90767876 90767877 G A 66 GENIC homozygous 55546724 5 90768197 90768198 T - 24 GENIC homozygous 55546726 5 90768323 90768324 C T 15 GENIC homozygous 55546728 5 90769782 90769783 A G 11 GENIC homozygous 55546730 5 90770154 90770155 A G 15 GENIC homozygous 55546732 5 90770642 90770643 C T 15 GENIC homozygous 55546734 5 90770952 90770953 G A 30 GENIC homozygous 55546736 5 90771431 90771432 C T 19 GENIC homozygous 55546738 5 90772558 90772559 A ATT 7 GENIC homozygous 55546740 5 90773703 90773704 T C 13 GENIC homozygous 55546742 5 90777314 90777315 A AT 17 GENIC homozygous 55546744 5 90778156 90778157 G A 12 GENIC homozygous 55546746 5 90778724 90778725 A - 23 GENIC possibly homozygous 55546748 5 90778909 90778910 G A 15 GENIC homozygous 55546750 5 90779313 90779314 A - 9 GENIC homozygous 55546752 5 90779807 90779808 A T 12 GENIC homozygous 55546754 5 90780896 90780897 T C 2 GENIC homozygous 55546756 5 90780958 90780959 G A 12 GENIC homozygous 55546758 5 90781070 90781071 C G 14 GENIC homozygous 55546760 5 90781681 90781682 T TA 17 GENIC homozygous 55546762 5 90781768 90781769 T A 22 GENIC homozygous 55546764 5 90782084 90782085 T A 28 GENIC homozygous 55546766 5 90782435 90782436 T C 24 GENIC homozygous 55546768 5 90782503 90782504 A AACACACACACAC 5 GENIC homozygous 56489655