chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 53143701 53143702 T C 35 GENIC homozygous 55378214 5 53144278 53144280 CC -- 26 GENIC possibly homozygous 55378215 5 53146735 53146736 C CTT 12 GENIC heterozygous 55378216 5 53151779 53151787 ACACACAC -------- 5 GENIC homozygous 55378218 5 53153038 53153039 G A 42 GENIC homozygous 55378220 5 53156940 53156941 A AT 9 GENIC heterozygous 55378221 5 53156941 53156942 T - 9 GENIC heterozygous 55378222 5 53157990 53157991 A C 29 GENIC homozygous 55378223 5 53158997 53158998 A G 29 GENIC homozygous 55378224 5 53160466 53160467 A - 13 GENIC homozygous 55378225 5 53162201 53162202 A ATG 37 GENIC homozygous 55378226 5 53165971 53165972 C CA 15 GENIC homozygous 55378227 5 53166020 53166021 G GTC 10 GENIC homozygous 55378228 5 53166888 53166889 A G 29 GENIC homozygous 55378232 5 53170158 53170159 C G 29 GENIC homozygous 55378233 5 53170536 53170537 G A 20 GENIC homozygous 56347354 5 53170554 53170555 A T 15 GENIC homozygous 55378236 5 53170662 53170663 G GTCTGTCTATCTA 13 GENIC homozygous 56560145 5 53171744 53171745 G T 33 GENIC homozygous 55378241 5 53171835 53171840 CCCTT ----- 29 GENIC homozygous 55378242 5 53172092 53172093 C - 21 GENIC homozygous 55378243 5 53172093 53172094 T A 22 GENIC homozygous 56347355 5 53173042 53173043 G A 48 GENIC homozygous 55378244 5 53173179 53173183 TGTA ---- 18 GENIC homozygous 55378245 5 53156116 53156117 A AATTTATTT 9 GENIC homozygous 56613088 5 53166075 53166081 TGTGTG ------ 3 GENIC homozygous 56613090 5 53170550 53170551 A ATT 8 GENIC homozygous 56613092 5 53170551 53170552 G GTCTGTCTATCTATCTATCCATCTATCATCTATCTATCCATCTATCTGTCTGTCTATCTATCCATCTGTCATCTATCTATCCATCTATCTGTCTGTCTATCTATCTATCCATCTATCATCTATCTATCCATCTATCTGTC 8 GENIC homozygous 56613094 5 53162234 53162235 G GGGGTGTGT 33 GENIC homozygous 56590850 5 53174010 53174011 A G 36 GENIC homozygous 55378248 5 53175644 53175645 T TGTCC 25 GENIC homozygous 56590851 5 53175667 53175668 C CCATCCATT 37 GENIC homozygous 56590852 5 53175803 53175804 C G 52 GENIC homozygous 55378250 5 53176174 53176180 TGTGTC ------ 32 GENIC heterozygous 56613097 5 53176176 53176180 TGTC ---- 25 GENIC heterozygous 56613099 5 53176387 53176393 AACAAC ------ 26 GENIC homozygous 55378251 5 53177286 53177287 G GT 20 GENIC heterozygous 55378252 5 53177748 53177749 G GTTTT 13 GENIC heterozygous 56613101 5 53177862 53177863 T C 20 GENIC homozygous 55378253 5 53177888 53177889 G - 27 GENIC homozygous 55378254 5 53177889 53177890 C A 27 GENIC homozygous 56347356 5 53177996 53177997 G T 23 GENIC homozygous 55378255 5 53179482 53179483 A G 36 GENIC homozygous 55378256 5 53179917 53179918 G A 33 GENIC homozygous 55378257 5 53179992 53179996 TGTG ---- 9 GENIC homozygous 56613103 5 53180272 53180273 T TA 20 GENIC homozygous 55378259 5 53182419 53182420 T TG 24 GENIC possibly homozygous 55378260 5 53184384 53184385 G A 22 GENIC homozygous 55378261 5 53184773 53184774 G A 23 GENIC homozygous 55378262 5 53185535 53185536 G A 15 GENIC homozygous 55378263 5 53186392 53186393 G GT 6 GENIC homozygous 56567313 5 53188513 53188514 A - 12 GENIC homozygous 55378265 5 53191374 53191375 T A 15 GENIC homozygous 55378267 5 53194221 53194222 T C 28 GENIC homozygous 55378268 5 53194344 53194345 T C 20 GENIC homozygous 55378269 5 53195311 53195312 C T 18 GENIC homozygous 55378270 5 53196966 53196967 C - 5 GENIC homozygous 55378271 5 53197009 53197010 G - 3 GENIC heterozygous 56008829 5 53197800 53197801 A T 12 GENIC homozygous 55378274 5 53200020 53200021 T - 16 GENIC homozygous 55378277 5 53200327 53200335 TGTGTGTG -------- 6 GENIC heterozygous 56543014 5 53201859 53201865 CTCTCT ------ 4 GENIC homozygous 56613105 5 53202891 53202892 C T 26 GENIC homozygous 55378279 5 53204400 53204412 AAACAAACAAAC ------------ 22 GENIC homozygous 56613107 5 53204834 53204835 T A 18 GENIC homozygous 55378281 5 53205341 53205345 TAGT ---- 34 GENIC homozygous 55378282 5 53205516 53205517 G - 37 GENIC homozygous 55378283 5 53207683 53207684 T C 52 GENIC homozygous 55378284 5 53210908 53210911 TCA --- 52 GENIC heterozygous 56415934 5 53213821 53213822 A ATTAT 17 GENIC homozygous 55378285 5 53214197 53214198 T G 27 GENIC homozygous 55378286 5 53218015 53218017 AA -- 7 GENIC homozygous 55378287 5 53218308 53218309 C T 40 GENIC homozygous 55378288 5 53220480 53220481 T C 28 GENIC homozygous 55378289 5 53221208 53221209 T - 12 GENIC homozygous 55378290 5 53225171 53225172 A G 19 GENIC homozygous 55378292 5 53226450 53226454 TCTC ---- 11 GENIC possibly homozygous 55378293 5 53226710 53226711 T TG 32 GENIC homozygous 55378294 5 53226714 53226715 T A 32 GENIC homozygous 56590853 5 53227717 53227718 G C 45 GENIC homozygous 55378295 5 53228588 53228589 T C 40 GENIC homozygous 55378296 5 53229886 53229887 C CGT 2 GENIC heterozygous 56487541 5 53231970 53231971 T A 19 GENIC homozygous 55378297 5 53232950 53232951 T C 35 GENIC homozygous 55378299 5 53233174 53233182 ACACACAC -------- 9 GENIC homozygous 56613109 5 53235868 53235869 A T 41 GENIC homozygous 55378300 5 53238133 53238134 T - 41 GENIC homozygous 55378301 5 53241884 53241885 A C 17 GENIC homozygous 55378302 5 53241933 53241938 TTGTT ----- 9 GENIC homozygous 55378303 5 53243493 53243494 G GAA 31 GENIC homozygous 55378304 5 53246135 53246136 C G 40 GENIC homozygous 55378307 5 53246312 53246313 T TG 18 GENIC homozygous 55378308 5 53246313 53246314 T TATG 18 GENIC homozygous 55378310 5 53246547 53246555 TGTGTGTG -------- 18 GENIC heterozygous 56415948 5 53246551 53246555 TGTG ---- 18 GENIC heterozygous 56613112 5 53246740 53246741 T TTTTTTTC 3 GENIC heterozygous 56415952 5 53246778 53246780 GG -- 7 GENIC heterozygous 56487542 5 53246860 53246861 C CT 26 GENIC homozygous 55378311 5 53247905 53247906 A G 25 GENIC homozygous 55378312 5 53249583 53249584 G GGCACTGCATGGTCTGTGTGTGAGGGCTCACAC 53 GENIC homozygous 56347358 5 53251835 53251836 A AT 5 GENIC homozygous 56008954 5 53253123 53253124 T G 51 GENIC homozygous 55378318 5 53253271 53253272 T C 45 GENIC homozygous 55378319 5 53257326 53257327 A G 13 GENIC homozygous 55378320 5 53258595 53258596 T TGTCCGTCCGTCC 35 GENIC homozygous 55378324 5 53258886 53258887 G C 28 GENIC homozygous 55378325 5 53260376 53260377 C CT 17 GENIC heterozygous 56487543 5 53260377 53260378 T - 17 GENIC heterozygous 55378326 5 53260752 53260753 A - 6 GENIC heterozygous 56415956 5 53261116 53261117 T C 17 GENIC homozygous 55378327 5 53262831 53262832 G A 65 GENIC homozygous 55378328 5 53265064 53265065 T TG 21 GENIC homozygous 55378329 5 53266705 53266706 A AT 5 GENIC homozygous 56415958 5 53266974 53266975 C - 9 GENIC heterozygous 56415960 5 53267403 53267404 G T 22 GENIC homozygous 55378331 5 53267754 53267755 A G 36 GENIC homozygous 55378332 5 53268430 53268431 A G 18 GENIC homozygous 55378333 5 53268606 53268607 T TTC 3 GENIC homozygous 56487544 5 53274135 53274136 C T 43 GENIC homozygous 55378335 5 53274261 53274262 G A 43 GENIC homozygous 55378336 5 53276996 53276997 T G 40 GENIC homozygous 55378337 5 53278925 53278943 GTGTGTGTGTGTGTGTGT ------------------ 3 GENIC homozygous 56415962 5 53280502 53280503 T C 10 GENIC homozygous 55378338 5 53281786 53281787 A G 25 GENIC homozygous 55378339 5 53281882 53281884 AG -- 28 GENIC homozygous 55378340 5 53285174 53285175 A G 23 GENIC homozygous 55378342 5 53288396 53288397 T TTTTTG 10 GENIC homozygous 55378344 5 53289060 53289061 G A 42 GENIC homozygous 55378345 5 53289867 53289868 A AT 12 GENIC homozygous 55378346 5 53290946 53290947 A C 42 GENIC homozygous 55378347 5 53298175 53298176 G A 21 GENIC homozygous 55378348 5 53298715 53298716 G GT 15 GENIC heterozygous 55378349 5 53298715 53298716 G GTT 15 GENIC heterozygous 55378350 5 53298736 53298737 T C 18 GENIC possibly homozygous 55378351 5 53300247 53300248 A T 37 GENIC homozygous 55378352 5 53300250 53300251 A T 20 GENIC homozygous 55877516 5 53302533 53302534 T - 28 GENIC possibly homozygous 55378353 5 53302535 53302536 T - 31 GENIC possibly homozygous 55378354 5 53303540 53303541 G A 34 GENIC homozygous 55378355 5 53305609 53305619 GTGTGTGTGT ---------- 17 GENIC heterozygous 56613114 5 53305611 53305619 GTGTGTGT -------- 17 GENIC possibly homozygous 56613116 5 53306804 53306805 T C 21 GENIC homozygous 55378357 5 53307453 53307454 C A 25 GENIC possibly homozygous 55378358 5 53307523 53307524 T TGC 21 GENIC possibly homozygous 56613118 5 53308077 53308078 T C 18 GENIC homozygous 55378360 5 53310419 53310420 T TA 12 GENIC heterozygous 55378361 5 53310740 53310741 T C 56 GENIC homozygous 55378362 5 53310800 53310801 G C 49 GENIC homozygous 55378363 5 53312557 53312569 TCCATCCATCCA ------------ 19 GENIC homozygous 56613120 5 53314699 53314700 C T 23 GENIC possibly homozygous 55378366 5 53315244 53315245 A AC 6 GENIC homozygous 55378372 5 53316361 53316362 C - 9 GENIC homozygous 55877520 5 53316680 53316681 G A 17 GENIC homozygous 55378373 5 53321353 53321354 G GAGACAC 25 GENIC homozygous 55378375 5 53323591 53323595 TGTG ---- 13 GENIC homozygous 55378376 5 53324552 53324553 C T 30 GENIC homozygous 55378377 5 53325611 53325612 A G 42 GENIC homozygous 55378378 5 53326773 53326777 GTGT ---- 20 GENIC heterozygous 56415984 5 53326775 53326777 GT -- 20 GENIC possibly homozygous 56415986 5 53326831 53326833 GC -- 39 GENIC homozygous 55378380 5 53326881 53326882 G GTATATA 23 GENIC homozygous 55378382 5 53327273 53327274 A AG 34 GENIC homozygous 55378383 5 53328988 53328989 A G 46 GENIC homozygous 55378384 5 53329185 53329186 A G 49 GENIC homozygous 55378385 5 53329581 53329582 G GT 37 GENIC homozygous 55378386 5 53330102 53330103 C A 32 GENIC homozygous 55378387 5 53330759 53330760 T C 21 GENIC homozygous 55378388 5 53332121 53332123 TG -- 1 GENIC homozygous 56613122 5 53332150 53332151 A ACC 5 GENIC homozygous 55378390 5 53353042 53353043 C CA 14 GENIC possibly homozygous 55378396 5 53353150 53353151 C G 15 GENIC homozygous 55378397 5 53354978 53354979 G C 25 GENIC homozygous 55378398 5 53355759 53355760 C G 15 GENIC homozygous 55378399 5 53360787 53360788 G C 36 GENIC homozygous 55378400 5 53360808 53360809 T - 43 GENIC homozygous 55378401 5 53360924 53360925 T C 45 GENIC homozygous 55378402 5 53361087 53361088 T C 38 GENIC homozygous 55378403 5 53361161 53361162 T C 18 GENIC homozygous 55378406 5 53362214 53362215 A - 23 GENIC homozygous 55378410