chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 161161841 161161842 G A 28 GENIC homozygous 55817510 5 161162075 161162076 C CT 45 GENIC homozygous 55817511 5 161162570 161162575 ATCGA ----- 35 GENIC homozygous 55817512 5 161162800 161162801 A - 8 GENIC homozygous 56463287 5 161162811 161162813 GA -- 9 GENIC heterozygous 55817515 5 161163547 161163548 G A 19 GENIC homozygous 55817516 5 161163583 161163584 G GA 26 GENIC homozygous 55817517 5 161163590 161163591 C CCGGGTTCTA 33 GENIC homozygous 55817518 5 161163901 161163902 C CGT 56 GENIC homozygous 55817519 5 161163909 161163910 T G 56 GENIC homozygous 55817520 5 161164213 161164214 G T 38 GENIC homozygous 55817521 5 161164347 161164348 T C 29 GENIC homozygous 55817522 5 161164515 161164516 G GTGTA 9 GENIC homozygous 55817523 5 161164565 161164566 T TG 8 GENIC homozygous 56463288 5 161164567 161164568 T A 9 GENIC homozygous 56463289 5 161164569 161164570 T A 11 GENIC homozygous 56463290 5 161164526 161164527 A G 8 GENIC homozygous 55817524 5 161164550 161164551 A ATGTGTGTG 6 GENIC homozygous 55817525 5 161164572 161164573 T TATATATATATA 13 GENIC homozygous 56463291 5 161164574 161164575 T A 13 GENIC homozygous 56463292 5 161164643 161164644 C A 22 GENIC homozygous 55817530 5 161164880 161164881 T A 10 GENIC possibly homozygous 56463293 5 161164882 161164883 T A 10 GENIC possibly homozygous 56463294 5 161164908 161164909 T A 2 GENIC homozygous 56463295 5 161164910 161164911 T A 5 GENIC homozygous 56360394 5 161164912 161164913 T A 6 GENIC homozygous 56360396 5 161165219 161165220 C T 43 GENIC homozygous 55817532 5 161165394 161165395 A G 44 GENIC homozygous 55817533 5 161165575 161165579 TTTT ---- 8 GENIC possibly homozygous 55817534 5 161165615 161165617 TC -- 16 GENIC possibly homozygous 55817535 5 161165929 161165930 C T 47 GENIC homozygous 55817537 5 161166004 161166005 G A 37 GENIC homozygous 55817538 5 161166281 161166282 T TATCCATCC 8 GENIC homozygous 56463296 5 161166393 161166394 G A 40 GENIC homozygous 55817541 5 161166394 161166395 G A 39 GENIC homozygous 55817542 5 161166725 161166726 C CT 14 GENIC possibly homozygous 55817543 5 161166743 161166744 A T 22 GENIC possibly homozygous 56463297 5 161166808 161166809 T C 37 GENIC possibly homozygous 55817545 5 161166941 161166942 C T 48 GENIC homozygous 55817546 5 161167124 161167125 T TAA 20 GENIC homozygous 55817547 5 161167257 161167258 T A 45 GENIC homozygous 55817548 5 161167493 161167494 A C 28 GENIC homozygous 55817549 5 161167764 161167765 G A 39 GENIC homozygous 55817550 5 161168221 161168222 G GACAC 18 GENIC homozygous 55817552 5 161168676 161168682 ACACAC ------ 23 GENIC possibly homozygous 56463298 5 161168678 161168682 ACAC ---- 23 GENIC heterozygous 56619344 5 161168799 161168870 ACACACACACACCACATACACACAGTCATACATGCACTTACACACACACACACACACCACACACACACACA ----------------------------------------------------------------------- 47 GENIC heterozygous 56463299 5 161168799 161168868 ACACACACACACCACATACACACAGTCATACATGCACTTACACACACACACACACACCACACACACACA --------------------------------------------------------------------- 47 GENIC heterozygous 56463300 5 161169004 161169005 C CAGACAGGCACACAT 51 GENIC homozygous 55817564 5 161169041 161169042 A ACAGGCAGG 12 GENIC homozygous 56360398 5 161169186 161169187 A G 23 GENIC homozygous 55817567 5 161169542 161169543 A AG 39 GENIC homozygous 55817568 5 161170129 161170130 G C 27 GENIC homozygous 55817569 5 161170181 161170182 T - 28 GENIC homozygous 55817570 5 161170319 161170320 T C 24 GENIC homozygous 55817571 5 161170366 161170369 GGG --- 3 GENIC heterozygous 55817572 5 161170367 161170369 GG -- 3 GENIC heterozygous 55817573 5 161170616 161170617 T C 34 GENIC homozygous 55817574 5 161170649 161170650 G GCATACACACACACACA 10 GENIC homozygous 56463301 5 161170734 161170737 GGG --- 8 GENIC heterozygous 55817576 5 161170735 161170737 GG -- 8 GENIC heterozygous 55817577 5 161171355 161171356 C T 24 GENIC homozygous 55817578 5 161171497 161171498 T A 19 GENIC homozygous 55817579 5 161171924 161171925 G A 15 GENIC homozygous 55817580 5 161171963 161171964 A C 11 GENIC homozygous 55817582 5 161172565 161172566 C A 44 GENIC homozygous 55817583 5 161173058 161173059 G A 25 GENIC homozygous 55817584 5 161173104 161173105 G A 31 GENIC homozygous 55817585 5 161173325 161173327 GT -- 2 GENIC homozygous 56463303 5 161173646 161173648 GT -- 6 GENIC homozygous 55817587 5 161173772 161173773 G GGT 44 GENIC homozygous 55817588 5 161173795 161173796 T TTGTG 53 GENIC homozygous 55817589 5 161173910 161173911 C T 42 GENIC homozygous 55817590 5 161174350 161174351 G A 39 GENIC possibly homozygous 55817591 5 161174388 161174389 T C 52 GENIC homozygous 55817592 5 161174838 161174839 G GTC 16 GENIC homozygous 55817593 5 161175379 161175380 T A 25 GENIC homozygous 55817597 5 161175552 161175553 T C 50 GENIC homozygous 55817598 5 161175563 161175564 T C 48 GENIC homozygous 55817599 5 161175635 161175636 A AT 32 GENIC possibly homozygous 55817600 5 161175772 161175773 C A 31 GENIC homozygous 55817601 5 161175896 161175897 C CTTTTCTT 28 GENIC homozygous 55817602 5 161177034 161177035 C T 44 GENIC homozygous 55817603 5 161178304 161178305 A G 43 GENIC homozygous 55817604 5 161178620 161178626 TTTATT ------ 6 GENIC heterozygous 56463305 5 161178626 161178627 T TGC 6 GENIC heterozygous 56463306 5 161180191 161180192 G T 30 GENIC homozygous 55817606 5 161180559 161180560 A G 33 GENIC homozygous 55817607 5 161181069 161181070 T A 45 GENIC homozygous 55817608 5 161181293 161181294 A C 25 GENIC homozygous 55817609 5 161181301 161181302 C T 27 GENIC homozygous 55817610 5 161181319 161181323 AACA ---- 21 GENIC possibly homozygous 55817611 5 161182218 161182219 T G 38 GENIC homozygous 55817614 5 161182493 161182494 C A 53 GENIC homozygous 55817615 5 161183563 161183564 C A 40 GENIC homozygous 55817616 5 161185902 161185903 A G 32 GENIC homozygous 55817617 5 161186236 161186237 G C 35 GENIC homozygous 55817618 5 161186715 161186716 C T 26 GENIC homozygous 55817619 5 161188029 161188030 C CATCGTA 28 GENIC homozygous 55817620 5 161188431 161188434 TTT --- 35 GENIC heterozygous 55817621 5 161188432 161188434 TT -- 35 GENIC heterozygous 55817622 5 161188433 161188434 T - 35 GENIC heterozygous 55817623 5 161189050 161189051 T TA 24 GENIC homozygous 55817624 5 161190447 161190448 G GA 48 GENIC homozygous 55817625 5 161190835 161190836 G GAA 16 GENIC heterozygous 55817626 5 161190835 161190836 G GA 16 GENIC heterozygous 55817627 5 161191808 161191809 T TCTTTC 12 GENIC homozygous 55817630 5 161193273 161193274 A G 38 GENIC homozygous 55817631 5 161193561 161193562 C CTGAT 29 GENIC homozygous 55817632 5 161194117 161194118 G A 65 GENIC homozygous 55817633 5 161195822 161195823 T C 49 GENIC homozygous 55817634 5 161196518 161196519 A C 34 GENIC homozygous 55817635 5 161197185 161197186 A G 36 GENIC homozygous 55817636 5 161198745 161198746 C CA 37 GENIC homozygous 55817638 5 161199707 161199708 G A 46 GENIC homozygous 55817641 5 161199899 161199900 C T 39 GENIC homozygous 55817642 5 161200301 161200302 C T 55 GENIC homozygous 55817643 5 161201477 161201479 CA -- 38 GENIC homozygous 55817644 5 161201754 161201755 G GA 18 GENIC heterozygous 56463307 5 161201773 161201774 C A 20 GENIC homozygous 56360504 5 161202238 161202239 C T 31 GENIC homozygous 55817648 5 161202964 161202965 T G 47 GENIC homozygous 55817649 5 161203247 161203251 GGGG ---- 34 GENIC homozygous 55817650 5 161204682 161204700 ACACACACACACACACAC ------------------ 12 GENIC heterozygous 56463308 5 161205113 161205114 G C 38 GENIC homozygous 55817655 5 161205231 161205232 T C 51 GENIC homozygous 55817656 5 161205719 161205720 T C 35 GENIC homozygous 55817657 5 161206052 161206060 CACACACA -------- 30 GENIC homozygous 56463309 5 161206248 161206249 C T 41 GENIC homozygous 55817660 5 161206513 161206514 A ATT 25 GENIC homozygous 56463310 5 161206531 161206618 TTTTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCTT --------------------------------------------------------------------------------------- 21 GENIC homozygous 56463311 5 161206819 161206821 TG -- 3 GENIC homozygous 56554818 5 161206834 161206835 G GTA 3 GENIC homozygous 56554819 5 161206843 161206844 C T 2 GENIC homozygous 55939699 5 161207108 161207109 C T 26 GENIC homozygous 55817665 5 161207190 161207191 G A 41 GENIC homozygous 55817666 5 161207605 161207606 T C 54 GENIC homozygous 55817667 5 161207710 161207711 G GGTACA 40 GENIC homozygous 55817668 5 161208162 161208163 A G 27 GENIC homozygous 55817670 5 161208209 161208210 T C 33 GENIC homozygous 55817671 5 161208313 161208314 C G 58 GENIC homozygous 55817672 5 161209349 161209350 A G 29 GENIC homozygous 55817673 5 161209452 161209453 G - 11 GENIC homozygous 55817674 5 161209454 161209468 TGATGATGATGATG -------------- 11 GENIC homozygous 55817675 5 161209808 161209809 C A 46 GENIC homozygous 55817677 5 161210467 161210468 A T 39 GENIC homozygous 55817678 5 161210742 161210812 ATCCATCCATCCATCCATCCATCCATCCATTCATCAACCACTCATTATCAAGATAAGAATTCACCCATCG ---------------------------------------------------------------------- 11 GENIC possibly homozygous 56463312 5 161210889 161210890 T TCCAC 21 GENIC homozygous 55817682 5 161211073 161211074 T TCATCCATC 11 GENIC homozygous 56463313 5 161211684 161211685 G - 17 GENIC homozygous 55817688 5 161211887 161211888 G A 31 GENIC homozygous 55817689 5 161212072 161212073 G A 39 GENIC homozygous 55817690 5 161213340 161213341 C G 44 GENIC homozygous 55817691 5 161213390 161213391 G A 52 GENIC homozygous 55817692 5 161214834 161214835 C T 57 GENIC homozygous 55817693 5 161214905 161214906 A G 42 GENIC homozygous 55817694 5 161216630 161216631 T G 40 GENIC homozygous 55817695 5 161216682 161216683 A G 29 GENIC homozygous 55817696 5 161217843 161217844 A C 33 GENIC homozygous 55817697 5 161218791 161218797 GTGTGT ------ 13 GENIC heterozygous 56463314 5 161219755 161219756 T TC 32 GENIC homozygous 55817700 5 161220157 161220177 TTCATGTGTGCATTCACTCA -------------------- 40 GENIC possibly homozygous 56360518 5 161222171 161222172 A C 38 GENIC homozygous 55817709 5 161222404 161222405 G GT 25 GENIC homozygous 55817710 5 161222614 161222615 C CCT 36 GENIC homozygous 55817711 5 161222630 161222631 C A 36 GENIC homozygous 55817712 5 161222631 161222632 G C 37 GENIC homozygous 55817713 5 161223058 161223059 C A 48 GENIC homozygous 55817714 5 161223310 161223311 T TC 30 GENIC homozygous 55817715 5 161223588 161223589 G GCCAGGGACACGTGCTTGTTC 37 GENIC homozygous 56463315 5 161223762 161223763 G A 47 GENIC homozygous 55817716 5 161224608 161224609 C G 53 GENIC homozygous 55817717 5 161224692 161224693 A G 44 GENIC homozygous 55817718 5 161225096 161225108 AGATAGATAGAT ------------ 6 GENIC homozygous 56463316 5 161225217 161225218 A AATAC 12 GENIC homozygous 55817724 5 161225280 161225282 GG -- 11 GENIC homozygous 55817726 5 161225283 161225285 TG -- 11 GENIC homozygous 55817727 5 161225288 161225289 G A 14 GENIC homozygous 55817728 5 161225329 161225330 T G 17 GENIC homozygous 55817729 5 161225339 161225340 C T 16 GENIC homozygous 55817730 5 161226346 161226347 T C 49 GENIC homozygous 55817731 5 161226464 161226465 T - 27 GENIC possibly homozygous 55817732 5 161226646 161226647 A G 49 GENIC homozygous 55817733 5 161227490 161227491 C A 36 GENIC homozygous 55817734 5 161227949 161227950 A G 53 GENIC homozygous 55817735 5 161228116 161228117 C A 36 GENIC homozygous 55817736 5 161228720 161228721 C - 19 GENIC possibly homozygous 55817737 5 161229008 161229009 G - 40 GENIC homozygous 55817738 5 161229009 161229010 C A 40 GENIC homozygous 56360522 5 161229301 161229302 C G 53 GENIC homozygous 55817739 5 161229724 161229725 A C 49 GENIC homozygous 55817740 5 161230109 161230110 T C 32 GENIC homozygous 55817741 5 161231832 161231833 A AG 30 GENIC homozygous 55817742 5 161231836 161231837 A AG 32 GENIC homozygous 55817743 5 161232058 161232059 G A 43 GENIC homozygous 55817744 5 161232511 161232512 T - 25 GENIC homozygous 55817745 5 161232826 161232827 G A 50 GENIC homozygous 55817746 5 161232896 161232897 A G 52 GENIC homozygous 55817747 5 161233009 161233010 T G 39 GENIC homozygous 55817748 5 161233025 161233026 A C 50 GENIC homozygous 55817749 5 161233074 161233075 A AG 50 GENIC homozygous 55817750 5 161233474 161233475 A G 71 GENIC homozygous 55817751 5 161233645 161233646 G A 46 GENIC homozygous 55817752 5 161233756 161233757 T C 49 GENIC homozygous 55817753 5 161234034 161234035 T G 35 GENIC homozygous 55817754 5 161234628 161234629 G C 43 GENIC homozygous 55817755 5 161234811 161234812 A G 42 GENIC homozygous 55817756 5 161234813 161234814 A G 43 GENIC homozygous 55817757 5 161234928 161234929 A G 32 GENIC homozygous 55817758 5 161235076 161235077 T C 26 GENIC homozygous 55817759 5 161235352 161235353 G GC 40 GENIC homozygous 55817760 5 161235466 161235467 A ATTGTGGCTCACAACCAT 5 GENIC homozygous 56463317 5 161235469 161235470 G GTAATGAGA 5 GENIC homozygous 56463318 5 161235553 161235558 AAAGA ----- 25 GENIC homozygous 55817762 5 161236545 161236546 T C 33 GENIC homozygous 55817766 5 161235574 161235575 G - 29 GENIC homozygous 55817763 5 161235829 161235830 T C 34 GENIC homozygous 55817764 5 161236167 161236168 T C 35 GENIC homozygous 55817765 5 161206622 161206653 AATTTTTTTATGTACTTTTTTTTCTTTTTTT ------------------------------- 1 GENIC homozygous 56570421 5 161236720 161236721 A G 48 GENIC homozygous 55817767 5 161236875 161236876 C G 38 GENIC homozygous 55817768 5 161237020 161237021 C T 50 GENIC homozygous 55817769 5 161237076 161237077 A G 32 GENIC homozygous 55817770 5 161237416 161237417 A G 43 GENIC homozygous 55817771 5 161237727 161237728 A G 30 GENIC homozygous 55817772 5 161238116 161238117 C T 47 GENIC homozygous 55817773 5 161238225 161238226 C T 32 GENIC possibly homozygous 55817774 5 161238443 161238444 A G 35 GENIC homozygous 55817775 5 161238447 161238448 A G 38 GENIC homozygous 55817776 5 161238512 161238513 C T 48 GENIC homozygous 55817777 5 161238903 161238904 A G 32 GENIC homozygous 55817778 5 161239072 161239073 C - 40 GENIC homozygous 55817779 5 161239379 161239380 C T 27 GENIC homozygous 55817780 5 161239484 161239485 G C 21 GENIC homozygous 55817781 5 161239706 161239707 G A 41 GENIC homozygous 55817782 5 161240080 161240081 T C 36 GENIC homozygous 55817783 5 161240110 161240111 C T 47 GENIC homozygous 55817784